BLASTX nr result

ID: Bupleurum21_contig00001474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001474
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr...   127   7e-28
emb|CBI37506.3| unnamed protein product [Vitis vinifera]              127   7e-28
ref|XP_002307198.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26
ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcr...   118   4e-25
ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcr...   118   4e-25

>ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Vitis vinifera]
          Length = 636

 Score =  127 bits (320), Expect = 7e-28
 Identities = 64/100 (64%), Positives = 76/100 (76%), Gaps = 3/100 (3%)
 Frame = -2

Query: 320 LKSRLLLMPIRAILKHSLNPLKECLPSIVHEFLXXXXXXQLFNVSEVY---GGLESELSR 150
           L+S+LLL+P+  ILKH L+PLK CLPSIV EFL      +LF VSE +     LESELSR
Sbjct: 454 LRSQLLLLPLETILKHPLSPLKVCLPSIVEEFLRQAKAARLFTVSETFIFSDLLESELSR 513

Query: 149 DFVSLERLDMFFPFDPYLLQNSDRFIRPNFIYWSMVKTTY 30
            F  +ERLDMFFPFDP LL+  DRFIRPNF+YWSM++TTY
Sbjct: 514 AFGGIERLDMFFPFDPCLLKKCDRFIRPNFVYWSMIRTTY 553


>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  127 bits (320), Expect = 7e-28
 Identities = 64/100 (64%), Positives = 76/100 (76%), Gaps = 3/100 (3%)
 Frame = -2

Query: 320 LKSRLLLMPIRAILKHSLNPLKECLPSIVHEFLXXXXXXQLFNVSEVY---GGLESELSR 150
           L+S+LLL+P+  ILKH L+PLK CLPSIV EFL      +LF VSE +     LESELSR
Sbjct: 445 LRSQLLLLPLETILKHPLSPLKVCLPSIVEEFLRQAKAARLFTVSETFIFSDLLESELSR 504

Query: 149 DFVSLERLDMFFPFDPYLLQNSDRFIRPNFIYWSMVKTTY 30
            F  +ERLDMFFPFDP LL+  DRFIRPNF+YWSM++TTY
Sbjct: 505 AFGGIERLDMFFPFDPCLLKKCDRFIRPNFVYWSMIRTTY 544


>ref|XP_002307198.1| predicted protein [Populus trichocarpa] gi|222856647|gb|EEE94194.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score =  123 bits (309), Expect = 1e-26
 Identities = 66/101 (65%), Positives = 75/101 (74%), Gaps = 4/101 (3%)
 Frame = -2

Query: 320 LKSRLLLMPIRAILKHSLNPLKECLPSIVHEFLXXXXXXQLFNVSEVY---GGLESELSR 150
           LKS+LLLMPI  ILKH L PL+ CLPSIV+EFL       LF +S+ +     LES+LSR
Sbjct: 456 LKSQLLLMPIEPILKHKLGPLEVCLPSIVNEFLKQAKAAHLFTISKAFIFEDLLESDLSR 515

Query: 149 DFVSLERLDMFFPFDPYLLQNSDR-FIRPNFIYWSMVKTTY 30
           DF  LERLDMFFPFDP LL+  DR FIRPNFIYW+ VKTTY
Sbjct: 516 DFGGLERLDMFFPFDPCLLKKCDRGFIRPNFIYWNHVKTTY 556


>ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Cucumis sativus]
          Length = 625

 Score =  118 bits (296), Expect = 4e-25
 Identities = 61/100 (61%), Positives = 72/100 (72%), Gaps = 3/100 (3%)
 Frame = -2

Query: 320 LKSRLLLMPIRAILKHSLNPLKECLPSIVHEFLXXXXXXQLFNVSEVY---GGLESELSR 150
           LKS+LLLMPI  +L H L+PLK CLPSIV EFL       LF  SE +   G LES+ SR
Sbjct: 444 LKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAKVANLFTPSENFIFNGLLESDYSR 503

Query: 149 DFVSLERLDMFFPFDPYLLQNSDRFIRPNFIYWSMVKTTY 30
            F  LERLDMFFPFDP LL+  DR++RP+F+YWSMV+ TY
Sbjct: 504 SFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTY 543


>ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Cucumis sativus]
          Length = 626

 Score =  118 bits (296), Expect = 4e-25
 Identities = 61/100 (61%), Positives = 72/100 (72%), Gaps = 3/100 (3%)
 Frame = -2

Query: 320 LKSRLLLMPIRAILKHSLNPLKECLPSIVHEFLXXXXXXQLFNVSEVY---GGLESELSR 150
           LKS+LLLMPI  +L H L+PLK CLPSIV EFL       LF  SE +   G LES+ SR
Sbjct: 444 LKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAKVANLFTPSENFIFNGLLESDYSR 503

Query: 149 DFVSLERLDMFFPFDPYLLQNSDRFIRPNFIYWSMVKTTY 30
            F  LERLDMFFPFDP LL+  DR++RP+F+YWSMV+ TY
Sbjct: 504 SFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTY 543


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