BLASTX nr result
ID: Bupleurum21_contig00001474
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00001474 (321 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr... 127 7e-28 emb|CBI37506.3| unnamed protein product [Vitis vinifera] 127 7e-28 ref|XP_002307198.1| predicted protein [Populus trichocarpa] gi|2... 123 1e-26 ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcr... 118 4e-25 ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcr... 118 4e-25 >ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Vitis vinifera] Length = 636 Score = 127 bits (320), Expect = 7e-28 Identities = 64/100 (64%), Positives = 76/100 (76%), Gaps = 3/100 (3%) Frame = -2 Query: 320 LKSRLLLMPIRAILKHSLNPLKECLPSIVHEFLXXXXXXQLFNVSEVY---GGLESELSR 150 L+S+LLL+P+ ILKH L+PLK CLPSIV EFL +LF VSE + LESELSR Sbjct: 454 LRSQLLLLPLETILKHPLSPLKVCLPSIVEEFLRQAKAARLFTVSETFIFSDLLESELSR 513 Query: 149 DFVSLERLDMFFPFDPYLLQNSDRFIRPNFIYWSMVKTTY 30 F +ERLDMFFPFDP LL+ DRFIRPNF+YWSM++TTY Sbjct: 514 AFGGIERLDMFFPFDPCLLKKCDRFIRPNFVYWSMIRTTY 553 >emb|CBI37506.3| unnamed protein product [Vitis vinifera] Length = 607 Score = 127 bits (320), Expect = 7e-28 Identities = 64/100 (64%), Positives = 76/100 (76%), Gaps = 3/100 (3%) Frame = -2 Query: 320 LKSRLLLMPIRAILKHSLNPLKECLPSIVHEFLXXXXXXQLFNVSEVY---GGLESELSR 150 L+S+LLL+P+ ILKH L+PLK CLPSIV EFL +LF VSE + LESELSR Sbjct: 445 LRSQLLLLPLETILKHPLSPLKVCLPSIVEEFLRQAKAARLFTVSETFIFSDLLESELSR 504 Query: 149 DFVSLERLDMFFPFDPYLLQNSDRFIRPNFIYWSMVKTTY 30 F +ERLDMFFPFDP LL+ DRFIRPNF+YWSM++TTY Sbjct: 505 AFGGIERLDMFFPFDPCLLKKCDRFIRPNFVYWSMIRTTY 544 >ref|XP_002307198.1| predicted protein [Populus trichocarpa] gi|222856647|gb|EEE94194.1| predicted protein [Populus trichocarpa] Length = 635 Score = 123 bits (309), Expect = 1e-26 Identities = 66/101 (65%), Positives = 75/101 (74%), Gaps = 4/101 (3%) Frame = -2 Query: 320 LKSRLLLMPIRAILKHSLNPLKECLPSIVHEFLXXXXXXQLFNVSEVY---GGLESELSR 150 LKS+LLLMPI ILKH L PL+ CLPSIV+EFL LF +S+ + LES+LSR Sbjct: 456 LKSQLLLMPIEPILKHKLGPLEVCLPSIVNEFLKQAKAAHLFTISKAFIFEDLLESDLSR 515 Query: 149 DFVSLERLDMFFPFDPYLLQNSDR-FIRPNFIYWSMVKTTY 30 DF LERLDMFFPFDP LL+ DR FIRPNFIYW+ VKTTY Sbjct: 516 DFGGLERLDMFFPFDPCLLKKCDRGFIRPNFIYWNHVKTTY 556 >ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Cucumis sativus] Length = 625 Score = 118 bits (296), Expect = 4e-25 Identities = 61/100 (61%), Positives = 72/100 (72%), Gaps = 3/100 (3%) Frame = -2 Query: 320 LKSRLLLMPIRAILKHSLNPLKECLPSIVHEFLXXXXXXQLFNVSEVY---GGLESELSR 150 LKS+LLLMPI +L H L+PLK CLPSIV EFL LF SE + G LES+ SR Sbjct: 444 LKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAKVANLFTPSENFIFNGLLESDYSR 503 Query: 149 DFVSLERLDMFFPFDPYLLQNSDRFIRPNFIYWSMVKTTY 30 F LERLDMFFPFDP LL+ DR++RP+F+YWSMV+ TY Sbjct: 504 SFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTY 543 >ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Cucumis sativus] Length = 626 Score = 118 bits (296), Expect = 4e-25 Identities = 61/100 (61%), Positives = 72/100 (72%), Gaps = 3/100 (3%) Frame = -2 Query: 320 LKSRLLLMPIRAILKHSLNPLKECLPSIVHEFLXXXXXXQLFNVSEVY---GGLESELSR 150 LKS+LLLMPI +L H L+PLK CLPSIV EFL LF SE + G LES+ SR Sbjct: 444 LKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAKVANLFTPSENFIFNGLLESDYSR 503 Query: 149 DFVSLERLDMFFPFDPYLLQNSDRFIRPNFIYWSMVKTTY 30 F LERLDMFFPFDP LL+ DR++RP+F+YWSMV+ TY Sbjct: 504 SFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTY 543