BLASTX nr result

ID: Bupleurum21_contig00001473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001473
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr...   199   2e-49
emb|CBI37506.3| unnamed protein product [Vitis vinifera]              199   2e-49
ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcr...   195   4e-48
ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcr...   191   5e-47
ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcr...   191   5e-47

>ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Vitis vinifera]
          Length = 636

 Score =  199 bits (506), Expect = 2e-49
 Identities = 99/168 (58%), Positives = 119/168 (70%)
 Frame = -2

Query: 506 EHLKSCYESDRLKRVFEDLHFSFQKTVLTANNLKFSQFVMFYACSLYPEACGEEFADRLV 327
           EHL+SC    RL  VFE L  SFQ TVL A   KF+QFVMFYAC+L PE CG  FA  L 
Sbjct: 306 EHLESCEAGGRLIEVFETLVLSFQTTVLNAFKSKFAQFVMFYACALDPENCGVRFARVLA 365

Query: 326 ETFKNSGESAELRIKAVAYLGSYLSRAKFVSASYVTTVLESLVNWCCTYCKSQEGETNPK 147
           + F  S      R+ AVAYL SYLSR KF++AS+V  +LE LV WC  YCK  +G+ NPK
Sbjct: 366 DFFVCSTFPPLNRMSAVAYLASYLSRGKFLTASFVANILERLVVWCLEYCKIHDGDINPK 425

Query: 146 AHTVFYAGIQVVMYILCFRMRSMLGVPHLKSRLLLMPIRAILKHSLNP 3
           AH VFY+G Q +MY+LCFRMRSM+ VPHL+S+LLL+P+  ILKH L+P
Sbjct: 426 AHQVFYSGCQAIMYVLCFRMRSMMNVPHLRSQLLLLPLETILKHPLSP 473


>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  199 bits (506), Expect = 2e-49
 Identities = 99/168 (58%), Positives = 119/168 (70%)
 Frame = -2

Query: 506 EHLKSCYESDRLKRVFEDLHFSFQKTVLTANNLKFSQFVMFYACSLYPEACGEEFADRLV 327
           EHL+SC    RL  VFE L  SFQ TVL A   KF+QFVMFYAC+L PE CG  FA  L 
Sbjct: 297 EHLESCEAGGRLIEVFETLVLSFQTTVLNAFKSKFAQFVMFYACALDPENCGVRFARVLA 356

Query: 326 ETFKNSGESAELRIKAVAYLGSYLSRAKFVSASYVTTVLESLVNWCCTYCKSQEGETNPK 147
           + F  S      R+ AVAYL SYLSR KF++AS+V  +LE LV WC  YCK  +G+ NPK
Sbjct: 357 DFFVCSTFPPLNRMSAVAYLASYLSRGKFLTASFVANILERLVVWCLEYCKIHDGDINPK 416

Query: 146 AHTVFYAGIQVVMYILCFRMRSMLGVPHLKSRLLLMPIRAILKHSLNP 3
           AH VFY+G Q +MY+LCFRMRSM+ VPHL+S+LLL+P+  ILKH L+P
Sbjct: 417 AHQVFYSGCQAIMYVLCFRMRSMMNVPHLRSQLLLLPLETILKHPLSP 464


>ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Glycine max]
          Length = 628

 Score =  195 bits (495), Expect = 4e-48
 Identities = 94/167 (56%), Positives = 121/167 (72%)
 Frame = -2

Query: 503 HLKSCYESDRLKRVFEDLHFSFQKTVLTANNLKFSQFVMFYACSLYPEACGEEFADRLVE 324
           HL+SC  S RL  VF  L  SFQ+TVL A   KF+QFVMFYAC+L PE CG +FA  L +
Sbjct: 297 HLESCQNSGRLAEVFNTLLASFQRTVLNAYKSKFTQFVMFYACALDPEGCGVKFAMVLAD 356

Query: 323 TFKNSGESAELRIKAVAYLGSYLSRAKFVSASYVTTVLESLVNWCCTYCKSQEGETNPKA 144
            F         R+ AVAYL SYL+RAKF+SA+ VT++++SLV+WC  YCK ++ + NP+A
Sbjct: 357 MFGGDANPPITRMSAVAYLASYLTRAKFLSAALVTSIIQSLVDWCYAYCKFRDFDMNPRA 416

Query: 143 HTVFYAGIQVVMYILCFRMRSMLGVPHLKSRLLLMPIRAILKHSLNP 3
           H VFY+G Q +MYI+CFRMRS++ VP LK +LL MP+ AILKH L+P
Sbjct: 417 HQVFYSGCQAIMYIMCFRMRSLMDVPRLKLQLLNMPMEAILKHKLSP 463


>ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Cucumis sativus]
          Length = 625

 Score =  191 bits (485), Expect = 5e-47
 Identities = 92/168 (54%), Positives = 120/168 (71%)
 Frame = -2

Query: 506 EHLKSCYESDRLKRVFEDLHFSFQKTVLTANNLKFSQFVMFYACSLYPEACGEEFADRLV 327
           EHL+SC    RL  VF+ L  SFQ+TVLTA   KF+QF++FYACSL PE CG  FA  L 
Sbjct: 296 EHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAISLA 355

Query: 326 ETFKNSGESAELRIKAVAYLGSYLSRAKFVSASYVTTVLESLVNWCCTYCKSQEGETNPK 147
           + F +  +   +R+ AV+YL S+LSR KF++ S VTT+L+ LV+WC  Y K+   + NPK
Sbjct: 356 DMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPK 415

Query: 146 AHTVFYAGIQVVMYILCFRMRSMLGVPHLKSRLLLMPIRAILKHSLNP 3
           AH VFY+G Q +MY+LCFRMRS+L +P LKS+LLLMPI  +L H L+P
Sbjct: 416 AHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSP 463


>ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Cucumis sativus]
          Length = 626

 Score =  191 bits (485), Expect = 5e-47
 Identities = 92/168 (54%), Positives = 120/168 (71%)
 Frame = -2

Query: 506 EHLKSCYESDRLKRVFEDLHFSFQKTVLTANNLKFSQFVMFYACSLYPEACGEEFADRLV 327
           EHL+SC    RL  VF+ L  SFQ+TVLTA   KF+QF++FYACSL PE CG  FA  L 
Sbjct: 296 EHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAISLA 355

Query: 326 ETFKNSGESAELRIKAVAYLGSYLSRAKFVSASYVTTVLESLVNWCCTYCKSQEGETNPK 147
           + F +  +   +R+ AV+YL S+LSR KF++ S VTT+L+ LV+WC  Y K+   + NPK
Sbjct: 356 DMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPK 415

Query: 146 AHTVFYAGIQVVMYILCFRMRSMLGVPHLKSRLLLMPIRAILKHSLNP 3
           AH VFY+G Q +MY+LCFRMRS+L +P LKS+LLLMPI  +L H L+P
Sbjct: 416 AHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSP 463


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