BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001462
         (996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278878.1| PREDICTED: BUD13 homolog [Vitis vinifera] gi...   321   2e-85
ref|XP_002532943.1| conserved hypothetical protein [Ricinus comm...   301   1e-79
ref|XP_003529941.1| PREDICTED: BUD13 homolog [Glycine max]            295   2e-77
gb|ABK96501.1| unknown [Populus trichocarpa x Populus deltoides]      286   4e-75
ref|NP_174470.1| pre-mRNA-splicing factor CWC26 [Arabidopsis tha...   280   4e-73

>ref|XP_002278878.1| PREDICTED: BUD13 homolog [Vitis vinifera]
           gi|297742135|emb|CBI33922.3| unnamed protein product
           [Vitis vinifera]
          Length = 480

 Score =  321 bits (822), Expect = 2e-85
 Identities = 157/259 (60%), Positives = 188/259 (72%), Gaps = 4/259 (1%)
 Frame = +1

Query: 1   RKSRAGDTQSQVSDLSPPRKSRR----DLSPPRKQLKESTSLADQQKTGLVSGKDVAEEV 168
           RK R G   S   D+SPPR+S +    DLSPPRK  K+ +S  +  KTGL+SGKD+ E  
Sbjct: 222 RKRRKGLGLSGSPDISPPRRSTQTDTPDLSPPRKSRKDVSSSKEPSKTGLISGKDIGELN 281

Query: 169 LKAKKQEFLRFKAKDPSLTGKGAEPIYRDKKTGQRITKEEFLXXXXXXXXXXXXXXXWGK 348
            K KK ++LRFK  DP ++G+GAEP+YRDK+ G RI+KEEFL               WGK
Sbjct: 282 AKTKKNDWLRFKEMDPLISGRGAEPVYRDKRKGDRISKEEFLKSQKGEEKPKEKKLEWGK 341

Query: 349 GLAQKRXXXXXXXXXXXXXXXPFARTRDDPDLDRMMKDRLRWGDPMAHLVKKKHAELILP 528
           GLAQKR               PFARTRDDP+LD+++KDR+RWGDPMAHLVK+K++ELILP
Sbjct: 342 GLAQKREAETKQQELELEKDKPFARTRDDPELDKILKDRVRWGDPMAHLVKRKNSELILP 401

Query: 529 DMGDDENMKASGFIVPQDIPKHSWIIRRLEAAPNRYGIKPGRHWDGVDRSTGFEKAMFTR 708
           D+GD E MK SGFI+PQ+IP HSWI R L+AAPNRYGI+PGRHWDGVDRSTGFEK MF R
Sbjct: 402 DLGDGEKMKESGFIIPQEIPSHSWIKRGLDAAPNRYGIRPGRHWDGVDRSTGFEKQMFKR 461

Query: 709 MNENKATEREAYLWSVSDM 765
            NE +ATEREAYLWSV+DM
Sbjct: 462 TNEKQATEREAYLWSVADM 480


>ref|XP_002532943.1| conserved hypothetical protein [Ricinus communis]
            gi|223527294|gb|EEF29447.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 570

 Score =  301 bits (772), Expect = 1e-79
 Identities = 158/274 (57%), Positives = 187/274 (68%), Gaps = 19/274 (6%)
 Frame = +1

Query: 1    RKSRAGDTQSQVSDLSPPRKSRR---------------DLSPPRKQLKEST---SLADQQ 126
            RK+RA   +S   DLSPPR  RR               D S  RK  K+S+   SL ++ 
Sbjct: 298  RKNRANIEKSGSPDLSPPRLPRRSSSTADGSSRAYSDKDASVTRKTQKDSSDPISLKERP 357

Query: 127  KTGLVSGKDVAEEVLKAKKQEFLRFKAKDPSLTGKGAEPIYRDKKTGQRITKEEFLXXXX 306
            KTGL++G D+ EE+ K KK + LRF+  DPS++G+GAE +YRDKK GQRI+KEE+L    
Sbjct: 358  KTGLITGHDIQEEISKTKKNDLLRFEQMDPSMSGRGAEAVYRDKK-GQRISKEEYLKSKQ 416

Query: 307  XXXXXXXXXXX-WGKGLAQKRXXXXXXXXXXXXXXXPFARTRDDPDLDRMMKDRLRWGDP 483
                        WGKGLAQKR               PFARTRDDP+LD+M+K+RLRWGDP
Sbjct: 417  KVEEKPKEKKLEWGKGLAQKREAEARLQELELEKEKPFARTRDDPELDKMLKERLRWGDP 476

Query: 484  MAHLVKKKHAELILPDMGDDENMKASGFIVPQDIPKHSWIIRRLEAAPNRYGIKPGRHWD 663
            MAHLVKKKH E +L D+GD E MK SGFIVPQ+IP HSWI R L+AAPNRYGIKPGRHWD
Sbjct: 477  MAHLVKKKHPEPVLADLGDSEKMKESGFIVPQEIPNHSWIKRGLDAAPNRYGIKPGRHWD 536

Query: 664  GVDRSTGFEKAMFTRMNENKATEREAYLWSVSDM 765
            GVDRS GFEK MF R+NE +ATE+EAYLWSVSDM
Sbjct: 537  GVDRSNGFEKKMFQRLNEKQATEKEAYLWSVSDM 570


>ref|XP_003529941.1| PREDICTED: BUD13 homolog [Glycine max]
          Length = 568

 Score =  295 bits (754), Expect = 2e-77
 Identities = 151/277 (54%), Positives = 184/277 (66%), Gaps = 31/277 (11%)
 Frame = +1

Query: 28   SQVSDLSPPRKSR------------------------------RDLSPPRKQLKESTSLA 117
            S VSDLSPPRK +                              RDLSPPRK  KE ++ A
Sbjct: 294  SSVSDLSPPRKIQKNVARLGSSDLSRHRSPSPSVKVVSHPSLDRDLSPPRKNPKELSNPA 353

Query: 118  DQQKTGLVSGKDVAEEVLKAKKQEFLRFKAKDPSLTGKGAEPIYRDKKTGQRITKEEFLX 297
               KTGL+SGKD+ +E+ + K+ + LRFK  DPS++G+GAEP+YRDK  G RI+KEE+L 
Sbjct: 354  G--KTGLISGKDIRDEIDRKKRDDMLRFKQMDPSISGRGAEPVYRDKVKGVRISKEEYLK 411

Query: 298  XXXXXXXXXXXXXX-WGKGLAQKRXXXXXXXXXXXXXXXPFARTRDDPDLDRMMKDRLRW 474
                           WGKGLAQKR               PFARTRDDP+LD+M+K+RLRW
Sbjct: 412  SKQKVEEKPKEIEIEWGKGLAQKREAEARLKELELEKEKPFARTRDDPELDKMLKERLRW 471

Query: 475  GDPMAHLVKKKHAELILPDMGDDENMKASGFIVPQDIPKHSWIIRRLEAAPNRYGIKPGR 654
            GDPMAHLVKKK+ E +LP++G++E MK SGF++PQDIP HSW+ R L+AAPNRYGI+PGR
Sbjct: 472  GDPMAHLVKKKYPEPVLPNLGENEKMKESGFVIPQDIPNHSWLKRGLDAAPNRYGIRPGR 531

Query: 655  HWDGVDRSTGFEKAMFTRMNENKATEREAYLWSVSDM 765
            HWDGVDRS GFEK MF R NE +A +REAYLWSVSDM
Sbjct: 532  HWDGVDRSNGFEKDMFKRTNEKQARDREAYLWSVSDM 568


>gb|ABK96501.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 238

 Score =  286 bits (733), Expect = 4e-75
 Identities = 139/237 (58%), Positives = 173/237 (72%), Gaps = 4/237 (1%)
 Frame = +1

Query: 67  RDLSPPRKQLKEST---SLADQQKTGLVSGKDVAEEVLKAKKQEFLRFKAKDPSLTGKGA 237
           +D+SPPRK  KES+   S  +  KTGL++G+D+ EE+ K KK+  L F   DPS++G+G 
Sbjct: 3   QDISPPRKNRKESSDPVSSKEPPKTGLITGRDMREEI-KTKKEASLLFDKMDPSISGRGV 61

Query: 238 EPIYRDKKTGQRITKEEFLXXXXXXXXXXXXXXX-WGKGLAQKRXXXXXXXXXXXXXXXP 414
           EP+YRDKKTG+RI+K+++L                WGKGLAQKR               P
Sbjct: 62  EPVYRDKKTGERISKDDYLKSKQKVEEKPKEKKLEWGKGLAQKREVETRLEELELEKDKP 121

Query: 415 FARTRDDPDLDRMMKDRLRWGDPMAHLVKKKHAELILPDMGDDENMKASGFIVPQDIPKH 594
           FARTRDDP+LD+M+ +R+RWGDPMAHLVKKKH+E +L D+GD E MK SGFI+PQDIP H
Sbjct: 122 FARTRDDPELDKMLMERVRWGDPMAHLVKKKHSESVLADLGDSEKMKESGFIIPQDIPSH 181

Query: 595 SWIIRRLEAAPNRYGIKPGRHWDGVDRSTGFEKAMFTRMNENKATEREAYLWSVSDM 765
           SWI R L+AAPNRYGI+PGRHWDGVDRS G+EK +  R+NE +ATEREAYLWSVSDM
Sbjct: 182 SWIKRGLDAAPNRYGIRPGRHWDGVDRSNGYEKQLVKRVNEKQATEREAYLWSVSDM 238


>ref|NP_174470.1| pre-mRNA-splicing factor CWC26 [Arabidopsis thaliana]
            gi|79319041|ref|NP_001031124.1| pre-mRNA-splicing factor
            CWC26 [Arabidopsis thaliana]
            gi|12321301|gb|AAG50722.1|AC079041_15 unknown protein
            [Arabidopsis thaliana] gi|44917425|gb|AAS49037.1|
            At1g31870 [Arabidopsis thaliana]
            gi|222422945|dbj|BAH19458.1| AT1G31870 [Arabidopsis
            thaliana] gi|222424111|dbj|BAH20015.1| AT1G31870
            [Arabidopsis thaliana] gi|332193288|gb|AEE31409.1|
            pre-mRNA-splicing factor CWC26 [Arabidopsis thaliana]
            gi|332193289|gb|AEE31410.1| pre-mRNA-splicing factor
            CWC26 [Arabidopsis thaliana]
          Length = 561

 Score =  280 bits (716), Expect = 4e-73
 Identities = 144/257 (56%), Positives = 173/257 (67%), Gaps = 2/257 (0%)
 Frame = +1

Query: 1    RKSRAGDTQSQVSDLSPPRKSRRDLSPPRKQLKESTSLADQQKTGLVSGKDVAEEVLKAK 180
            R+S    ++S   D SPPR+ RRD SPP+          +Q+KTGL+SGKD+  E  K K
Sbjct: 312  RRSSENVSRSSNFDSSPPRRPRRDSSPPQIS-------KEQRKTGLISGKDIGSEYRKKK 364

Query: 181  KQEFLRFKAKDPSLTGKGAEPIYRDKKTGQRITKEEFLXXXXXXXXXXXXXXX--WGKGL 354
            + E LRFK  D  LTG+ AE ++RDK TG+RI+KEE+L                 WGKGL
Sbjct: 365  EDEKLRFKNMDSELTGQNAEAVFRDKITGKRISKEEYLKSKQKKVIEKPKEIKLEWGKGL 424

Query: 355  AQKRXXXXXXXXXXXXXXXPFARTRDDPDLDRMMKDRLRWGDPMAHLVKKKHAELILPDM 534
            AQKR               PFARTRDDP+LD+MMK+R+R+GDPMAHLVKK+  E  L D+
Sbjct: 425  AQKREAEARLQELELEKDKPFARTRDDPELDQMMKERVRFGDPMAHLVKKRKYETTLVDL 484

Query: 535  GDDENMKASGFIVPQDIPKHSWIIRRLEAAPNRYGIKPGRHWDGVDRSTGFEKAMFTRMN 714
            GDDE MK SGFI+PQ +PKHSW+ RRLEAA NRYGIKPGRHWDGVDRS G EK +  + N
Sbjct: 485  GDDEEMKKSGFIIPQSVPKHSWLTRRLEAASNRYGIKPGRHWDGVDRSNGTEKDLIKKTN 544

Query: 715  ENKATEREAYLWSVSDM 765
            E KATE EAYLWSV+DM
Sbjct: 545  ERKATEIEAYLWSVADM 561