BLASTX nr result

ID: Bupleurum21_contig00001447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001447
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF85800.1| 60S ribosomal protein L2 [Nicotiana tabacum]           229   2e-58
ref|XP_002269409.1| PREDICTED: 60S ribosomal protein L8 [Vitis v...   229   2e-58
ref|XP_002283149.1| PREDICTED: 60S ribosomal protein L8 [Vitis v...   228   4e-58
gb|ABB55374.1| ribosomal protein L2-like [Solanum tuberosum]          228   5e-58
ref|NP_001234115.1| 60S ribosomal protein L8 [Solanum lycopersic...   228   5e-58

>gb|AAF85800.1| 60S ribosomal protein L2 [Nicotiana tabacum]
          Length = 174

 Score =  229 bits (584), Expect = 2e-58
 Identities = 106/107 (99%), Positives = 107/107 (100%)
 Frame = +1

Query: 1   SGDYAIVISHNPDNGTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKY 180
           SGDYAIVISHNPDNGT+RIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKY
Sbjct: 44  SGDYAIVISHNPDNGTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKY 103

Query: 181 RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 321
           RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG
Sbjct: 104 RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 150


>ref|XP_002269409.1| PREDICTED: 60S ribosomal protein L8 [Vitis vinifera]
          Length = 260

 Score =  229 bits (583), Expect = 2e-58
 Identities = 105/107 (98%), Positives = 107/107 (100%)
 Frame = +1

Query: 1   SGDYAIVISHNPDNGTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKY 180
           SGDYAIV+SHNPDNGTSRIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKY
Sbjct: 130 SGDYAIVVSHNPDNGTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKY 189

Query: 181 RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 321
           RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG
Sbjct: 190 RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 236


>ref|XP_002283149.1| PREDICTED: 60S ribosomal protein L8 [Vitis vinifera]
          Length = 260

 Score =  228 bits (581), Expect = 4e-58
 Identities = 103/107 (96%), Positives = 107/107 (100%)
 Frame = +1

Query: 1   SGDYAIVISHNPDNGTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKY 180
           SGDYAIV+SHNPDNGTSRIKLPSG+KKI+PSGCRAM+GQVAGGGRTEKPMLKAGNAYHKY
Sbjct: 130 SGDYAIVVSHNPDNGTSRIKLPSGAKKIIPSGCRAMVGQVAGGGRTEKPMLKAGNAYHKY 189

Query: 181 RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 321
           RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG
Sbjct: 190 RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 236


>gb|ABB55374.1| ribosomal protein L2-like [Solanum tuberosum]
          Length = 261

 Score =  228 bits (580), Expect = 5e-58
 Identities = 104/107 (97%), Positives = 107/107 (100%)
 Frame = +1

Query: 1   SGDYAIVISHNPDNGTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKY 180
           SGDYAIVISHNPDNGT+R+KLPSG+KKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKY
Sbjct: 130 SGDYAIVISHNPDNGTTRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKY 189

Query: 181 RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 321
           RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG
Sbjct: 190 RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 236


>ref|NP_001234115.1| 60S ribosomal protein L8 [Solanum lycopersicum]
           gi|266944|sp|P29766.1|RL8_SOLLC RecName: Full=60S
           ribosomal protein L8; AltName: Full=L2; AltName:
           Full=Ribosomal protein TL2 gi|19343|emb|CAA45863.1|
           ribosomal protein L2 [Solanum lycopersicum]
          Length = 260

 Score =  228 bits (580), Expect = 5e-58
 Identities = 104/107 (97%), Positives = 107/107 (100%)
 Frame = +1

Query: 1   SGDYAIVISHNPDNGTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKY 180
           SGDYAIVISHNPDNGT+R+KLPSG+KKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKY
Sbjct: 130 SGDYAIVISHNPDNGTTRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKY 189

Query: 181 RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 321
           RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG
Sbjct: 190 RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 236


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