BLASTX nr result

ID: Bupleurum21_contig00001432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001432
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB86282.1| ubiquitin-conjugating protein-like [Solanum tuber...   308   8e-82
gb|ABB87105.1| ubiquitin conjugating enzyme-like [Solanum tubero...   306   2e-81
ref|XP_004138029.1| PREDICTED: ubiquitin-conjugating enzyme E2 2...   306   3e-81
ref|XP_002322290.1| predicted protein [Populus trichocarpa] gi|1...   305   4e-81
ref|NP_001233964.1| ubiquitin conjugating enzyme [Solanum lycope...   305   5e-81

>gb|ABB86282.1| ubiquitin-conjugating protein-like [Solanum tuberosum]
          Length = 194

 Score =  308 bits (788), Expect = 8e-82
 Identities = 146/184 (79%), Positives = 166/184 (90%)
 Frame = -1

Query: 603 MVDIARVQKELNECNRKGDVSGISVELKANSLTHLIGSIPGPIGTPYEGGSFKIDIVIPD 424
           MVD+ARVQKEL+ECNR   VSGI+V LK +SLTHLIG+IPGP+GTPYEGG+FKIDI + D
Sbjct: 1   MVDLARVQKELHECNRDVQVSGINVTLKGDSLTHLIGTIPGPVGTPYEGGTFKIDITLTD 60

Query: 423 GYPFEPPKMQFVTRVWHPNISSQSGAICLDILRKEWSPALTIKTALLSIQALLSAPEPDD 244
           GYPFEPPKM+F T+VWHPNISSQSGAICLDIL+ +WSPALT+KTALLSIQALLSAPEPDD
Sbjct: 61  GYPFEPPKMKFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSIQALLSAPEPDD 120

Query: 243 PQDAVVAQQYLKDYQTFASTARYWTEAYAKTSSLGMEEKVQRLVEMGFPEAMVRSALEAV 64
           PQDAVVAQQYL+D+QTF  TARYWTE +AKTS+L  +EK+Q+LVEMGFPEA VRS LEA 
Sbjct: 121 PQDAVVAQQYLRDHQTFVGTARYWTETFAKTSTLAADEKIQKLVEMGFPEAQVRSTLEAN 180

Query: 63  GGDE 52
           G DE
Sbjct: 181 GWDE 184


>gb|ABB87105.1| ubiquitin conjugating enzyme-like [Solanum tuberosum]
          Length = 194

 Score =  306 bits (784), Expect = 2e-81
 Identities = 145/184 (78%), Positives = 165/184 (89%)
 Frame = -1

Query: 603 MVDIARVQKELNECNRKGDVSGISVELKANSLTHLIGSIPGPIGTPYEGGSFKIDIVIPD 424
           MVD+ RVQKEL+ECNR   VSGI+V LK +SLTHLIG+IPGP+GTPYEGG+FKIDI + D
Sbjct: 1   MVDLTRVQKELHECNRDVQVSGINVTLKGDSLTHLIGTIPGPVGTPYEGGTFKIDITLTD 60

Query: 423 GYPFEPPKMQFVTRVWHPNISSQSGAICLDILRKEWSPALTIKTALLSIQALLSAPEPDD 244
           GYPFEPPKM+F T+VWHPNISSQSGAICLDIL+ +WSPALT+KTALLSIQALLSAPEPDD
Sbjct: 61  GYPFEPPKMKFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSIQALLSAPEPDD 120

Query: 243 PQDAVVAQQYLKDYQTFASTARYWTEAYAKTSSLGMEEKVQRLVEMGFPEAMVRSALEAV 64
           PQDAVVAQQYL+D+QTF  TARYWTE +AKTS+L  +EK+Q+LVEMGFPEA VRS LEA 
Sbjct: 121 PQDAVVAQQYLRDHQTFVGTARYWTETFAKTSTLAADEKIQKLVEMGFPEAQVRSTLEAN 180

Query: 63  GGDE 52
           G DE
Sbjct: 181 GWDE 184


>ref|XP_004138029.1| PREDICTED: ubiquitin-conjugating enzyme E2 27-like [Cucumis
           sativus] gi|449501428|ref|XP_004161363.1| PREDICTED:
           ubiquitin-conjugating enzyme E2 27-like [Cucumis
           sativus]
          Length = 194

 Score =  306 bits (783), Expect = 3e-81
 Identities = 144/184 (78%), Positives = 166/184 (90%)
 Frame = -1

Query: 603 MVDIARVQKELNECNRKGDVSGISVELKANSLTHLIGSIPGPIGTPYEGGSFKIDIVIPD 424
           M+D ARVQKEL EC +  + SGI V  K++SL+HL+G+IPGPI TPYEGG F+IDI +PD
Sbjct: 1   MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPD 60

Query: 423 GYPFEPPKMQFVTRVWHPNISSQSGAICLDILRKEWSPALTIKTALLSIQALLSAPEPDD 244
           GYPFEPPKMQF T+VWHPNISSQSGAICLDIL+ +WSPALT+KTALLS+QALLSAP+PDD
Sbjct: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120

Query: 243 PQDAVVAQQYLKDYQTFASTARYWTEAYAKTSSLGMEEKVQRLVEMGFPEAMVRSALEAV 64
           PQDAVVAQQYL+DYQTFA TARYWTE +AKTSSLG+EEKVQ+L+EMGFPEA VRS+LEAV
Sbjct: 121 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAV 180

Query: 63  GGDE 52
           G DE
Sbjct: 181 GWDE 184


>ref|XP_002322290.1| predicted protein [Populus trichocarpa] gi|118481915|gb|ABK92892.1|
           unknown [Populus trichocarpa]
           gi|222869286|gb|EEF06417.1| predicted protein [Populus
           trichocarpa]
          Length = 194

 Score =  305 bits (782), Expect = 4e-81
 Identities = 143/184 (77%), Positives = 165/184 (89%)
 Frame = -1

Query: 603 MVDIARVQKELNECNRKGDVSGISVELKANSLTHLIGSIPGPIGTPYEGGSFKIDIVIPD 424
           M+D ARVQKEL EC+R  + SGI V  K+++L  L G+IPGPIGTPYEGG+F+IDI +PD
Sbjct: 1   MIDFARVQKELQECSRDMEASGIKVAPKSDNLGRLTGTIPGPIGTPYEGGTFQIDITLPD 60

Query: 423 GYPFEPPKMQFVTRVWHPNISSQSGAICLDILRKEWSPALTIKTALLSIQALLSAPEPDD 244
           GYPFEPPKMQF T+VWHPNISSQSGAICLDIL+ +WSPALT+KTALLS+QALLSAPEPDD
Sbjct: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPEPDD 120

Query: 243 PQDAVVAQQYLKDYQTFASTARYWTEAYAKTSSLGMEEKVQRLVEMGFPEAMVRSALEAV 64
           PQDAVVAQQYL+DYQTF  TARYWTE +AKTSSLG+EEKVQ+LVEMGFPE++ R ALE+V
Sbjct: 121 PQDAVVAQQYLRDYQTFVGTARYWTETFAKTSSLGVEEKVQKLVEMGFPESLARGALESV 180

Query: 63  GGDE 52
           GGDE
Sbjct: 181 GGDE 184


>ref|NP_001233964.1| ubiquitin conjugating enzyme [Solanum lycopersicum]
           gi|886679|emb|CAA58111.1| ubiquitin conjugating enzyme
           [Solanum lycopersicum]
          Length = 194

 Score =  305 bits (781), Expect = 5e-81
 Identities = 144/184 (78%), Positives = 166/184 (90%)
 Frame = -1

Query: 603 MVDIARVQKELNECNRKGDVSGISVELKANSLTHLIGSIPGPIGTPYEGGSFKIDIVIPD 424
           MVD+ARVQKEL+ECNR   VSGI+V LK +SLTHLIG+IPGP+GTPYEGG+FKIDI + D
Sbjct: 1   MVDLARVQKELHECNRDVQVSGINVTLKGDSLTHLIGTIPGPVGTPYEGGTFKIDITLTD 60

Query: 423 GYPFEPPKMQFVTRVWHPNISSQSGAICLDILRKEWSPALTIKTALLSIQALLSAPEPDD 244
           GYPFEPPKM+F T+VWHPNISSQSGAICLDIL+ +WSPALT+KTALLSIQALLSAPEPDD
Sbjct: 61  GYPFEPPKMKFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSIQALLSAPEPDD 120

Query: 243 PQDAVVAQQYLKDYQTFASTARYWTEAYAKTSSLGMEEKVQRLVEMGFPEAMVRSALEAV 64
           PQDAVVAQQYL+++QTF  TARYWTE +AKTS+L  ++K+Q+LVEMGFPEA VRS LEA 
Sbjct: 121 PQDAVVAQQYLREHQTFVGTARYWTETFAKTSTLAADDKIQKLVEMGFPEAQVRSTLEAN 180

Query: 63  GGDE 52
           G DE
Sbjct: 181 GWDE 184


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