BLASTX nr result

ID: Bupleurum21_contig00001417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001417
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160733.1| PREDICTED: wound-induced protein 1-like [Cuc...   237   1e-60
ref|XP_002520818.1| conserved hypothetical protein [Ricinus comm...   233   1e-59
ref|XP_002520817.1| conserved hypothetical protein [Ricinus comm...   233   2e-59
ref|XP_003633449.1| PREDICTED: uncharacterized protein LOC100853...   223   2e-56
emb|CBI25404.3| unnamed protein product [Vitis vinifera]              212   5e-53

>ref|XP_004160733.1| PREDICTED: wound-induced protein 1-like [Cucumis sativus]
          Length = 227

 Score =  237 bits (605), Expect = 1e-60
 Identities = 124/178 (69%), Positives = 143/178 (80%), Gaps = 15/178 (8%)
 Frame = -1

Query: 526 LQELANSQEILEE--SKNKRVVLALYEALSCRDVTAVHTLVASDIEWWFHGPPTHQFMMR 353
           LQELANSQ ILEE  S N+RVVLALYEALS R+V  VH ++A D+EWWFHGPP+HQF+MR
Sbjct: 52  LQELANSQGILEEEDSSNQRVVLALYEALSSRNVNTVHQILAPDLEWWFHGPPSHQFLMR 111

Query: 352 LLTGTDTSSSHSFKFVPQSITAFGSTVLVEGCDQDRSISWIHAWTVTDGIITQVREYFNT 173
           LLTG  +S+  SF+FVPQSIT+FGSTVLVEGCD  RSISWIHAWTVTDGIITQ+REYFNT
Sbjct: 112 LLTGA-SSNGQSFQFVPQSITSFGSTVLVEGCDPSRSISWIHAWTVTDGIITQLREYFNT 170

Query: 172 SLTVTRFGNGSGFSPSVTSL-------------HCPSLWESSLAGRVGKSVPGLVLAI 38
           SLTVTR G+ S + PS +S              HCPS+WESS++ +VGKSVPGLVLAI
Sbjct: 171 SLTVTRVGDPSEY-PSTSSSSASSEISSAASLHHCPSVWESSVSNQVGKSVPGLVLAI 227


>ref|XP_002520818.1| conserved hypothetical protein [Ricinus communis]
           gi|223539949|gb|EEF41527.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 204

 Score =  233 bits (595), Expect = 1e-59
 Identities = 120/186 (64%), Positives = 137/186 (73%), Gaps = 24/186 (12%)
 Frame = -1

Query: 523 QELANSQEILEES----KNKRVVLALYEALSCRDVTAVHTLVASDIEWWFHGPPTHQFMM 356
           QELANSQEILEE     KN+ VVL+LYEAL  RDV  VH ++ASD+EWWFHGPP+HQFMM
Sbjct: 19  QELANSQEILEEESSSRKNQEVVLSLYEALKSRDVDTVHKILASDLEWWFHGPPSHQFMM 78

Query: 355 RLLTGTDTS----SSHSFKFVPQSITAFGSTVLVEGCDQDRSISWIHAWTVTDGIITQVR 188
           RLLTG DTS    S  +F+F P+ I  FGS V+ EGCD  RSISW+HAWTVTDGIITQV+
Sbjct: 79  RLLTGADTSLSKISKKTFEFNPEIIRVFGSIVIAEGCDSTRSISWVHAWTVTDGIITQVK 138

Query: 187 EYFNTSLTVTRFGNGSGFSPS----------------VTSLHCPSLWESSLAGRVGKSVP 56
           EYFNTSLTVTR G+     PS                +TS+HCPS+WESSL+ RVGKSVP
Sbjct: 139 EYFNTSLTVTRLGHRDQSEPSDSSPSSSSSSSSSTAEITSVHCPSVWESSLSNRVGKSVP 198

Query: 55  GLVLAI 38
           GLVLAI
Sbjct: 199 GLVLAI 204


>ref|XP_002520817.1| conserved hypothetical protein [Ricinus communis]
           gi|223539948|gb|EEF41526.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 208

 Score =  233 bits (594), Expect = 2e-59
 Identities = 124/190 (65%), Positives = 138/190 (72%), Gaps = 28/190 (14%)
 Frame = -1

Query: 523 QELANSQEILEES----KNKRVVLALYEALSCRDVTAVHTLVASDIEWWFHGPPTHQFMM 356
           QELANSQEILEE     KN++VVLALY+AL  RDV  VH ++ASDIEWWFHGPP+HQFMM
Sbjct: 19  QELANSQEILEEESSSRKNQQVVLALYDALKSRDVDTVHKILASDIEWWFHGPPSHQFMM 78

Query: 355 RLLTGTDTSS-------SHSFKFVPQSITAFGSTVLVEGCDQDRSISWIHAWTVTDGIIT 197
           RLLTG DTSS       S SF+F P+ I  FGS V+ EGCD  RSISW+HAWTVTDGIIT
Sbjct: 79  RLLTGADTSSFKKSSSSSTSFEFNPEIIRVFGSIVIAEGCDYTRSISWVHAWTVTDGIIT 138

Query: 196 QVREYFNTSLTVTRFGN---------------GSGFSPS--VTSLHCPSLWESSLAGRVG 68
           QVREYFNTSLTVTR GN                S  SP+  + S HCPS+WESS + RVG
Sbjct: 139 QVREYFNTSLTVTRLGNQSAPSDYSSVASSSSSSSSSPATEIASAHCPSVWESSFSNRVG 198

Query: 67  KSVPGLVLAI 38
           KSVPGLVLAI
Sbjct: 199 KSVPGLVLAI 208


>ref|XP_003633449.1| PREDICTED: uncharacterized protein LOC100853125 [Vitis vinifera]
          Length = 268

 Score =  223 bits (568), Expect = 2e-56
 Identities = 116/179 (64%), Positives = 130/179 (72%), Gaps = 16/179 (8%)
 Frame = -1

Query: 526 LQELANSQEILEE--SKNKRVVLALYEALSCRDVTAVHTLVASDIEWWFHGPPTHQFMMR 353
           L ELANS EILEE  + N+RVV ALYEAL  RDV  VH L+A+D+EWWFHGPP+HQFMMR
Sbjct: 92  LPELANSPEILEEVDASNQRVVRALYEALGSRDVDTVHRLLAADLEWWFHGPPSHQFMMR 151

Query: 352 LLTGTDTSSSHSFKFVPQSITAFGSTVLVEGCDQDRSISWIHAWTVTDGIITQVREYFNT 173
           LLTG   SS  SF F P +  +FGSTVL EGCD   SI+W+HAWTVTDG+ITQVREYFNT
Sbjct: 152 LLTGV--SSDESFVFEPLAFASFGSTVLAEGCDHSGSIAWVHAWTVTDGVITQVREYFNT 209

Query: 172 SLTVTRFGN--------------GSGFSPSVTSLHCPSLWESSLAGRVGKSVPGLVLAI 38
           SLTVTR  N               S  +PS  S HCPS+WESS + RVGKSVPGLVLAI
Sbjct: 210 SLTVTRLSNSDFTTSPSSSISAASSSSTPSPPSRHCPSVWESSFSDRVGKSVPGLVLAI 268


>emb|CBI25404.3| unnamed protein product [Vitis vinifera]
          Length = 585

 Score =  212 bits (539), Expect = 5e-53
 Identities = 109/171 (63%), Positives = 123/171 (71%), Gaps = 16/171 (9%)
 Frame = -1

Query: 520 ELANSQEILEE--SKNKRVVLALYEALSCRDVTAVHTLVASDIEWWFHGPPTHQFMMRLL 347
           ELANS EILEE  + N+RVV ALYEAL  RDV  VH L+A+D+EWWFHGPP+HQFMMRLL
Sbjct: 338 ELANSPEILEEVDASNQRVVRALYEALGSRDVDTVHRLLAADLEWWFHGPPSHQFMMRLL 397

Query: 346 TGTDTSSSHSFKFVPQSITAFGSTVLVEGCDQDRSISWIHAWTVTDGIITQVREYFNTSL 167
           TG   SS  SF F P +  +FGSTVL EGCD   SI+W+HAWTVTDG+ITQVREYFNTSL
Sbjct: 398 TGV--SSDESFVFEPLAFASFGSTVLAEGCDHSGSIAWVHAWTVTDGVITQVREYFNTSL 455

Query: 166 TVTRFGN--------------GSGFSPSVTSLHCPSLWESSLAGRVGKSVP 56
           TVTR  N               S  +PS  S HCPS+WESS + RVGKSVP
Sbjct: 456 TVTRLSNSDFTTSPSSSISAASSSSTPSPPSRHCPSVWESSFSDRVGKSVP 506


Top