BLASTX nr result

ID: Bupleurum21_contig00001408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001408
         (1235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280892.2| PREDICTED: protein MEI2-like 4-like [Vitis v...   381   e-103
emb|CBI15756.3| unnamed protein product [Vitis vinifera]              381   e-103
ref|XP_002511091.1| RNA-binding protein, putative [Ricinus commu...   359   9e-97
ref|XP_002321750.1| predicted protein [Populus trichocarpa] gi|2...   350   3e-94
ref|XP_002267714.2| PREDICTED: protein MEI2-like 4-like [Vitis v...   314   3e-83

>ref|XP_002280892.2| PREDICTED: protein MEI2-like 4-like [Vitis vinifera]
          Length = 991

 Score =  381 bits (978), Expect = e-103
 Identities = 206/393 (52%), Positives = 253/393 (64%), Gaps = 16/393 (4%)
 Frame = +1

Query: 46   EYYDRSAHVISYNPFSTVPNLSNDANPRILEGINDRNGYIVDPKGQQAELHAGVFGSSWT 225
            EY+D  A+ I YN  ST+ +++    PRI EGI++R+ + V   G   EL+ G FGSS  
Sbjct: 555  EYHDNLANAIRYNSSSTIGDMTGHVGPRITEGIDNRHIHRVGSNGHPIELNGGAFGSSGN 614

Query: 226  NGCSIPEDHYLKGTSNTFQQFSSSPLGWPNSLPLANGIRAHCTQNLPGLSRSSSNTLNTV 405
              C +   H   G S+++Q  SSSP+ WPNS   +NG+ A     +PG  R   + LN V
Sbjct: 615  GSCPVHGLHRAWGNSSSYQHHSSSPMIWPNSPSFSNGVHAQRPTQVPGFPRPPPHMLNIV 674

Query: 406  SHSRDLMNKVSHTRLCHDGSVPASNLSRWNSEYAY-----------LDSIGRLGFHDK-- 546
            S        V H    H GS PA N S W+  +AY           L S+G +GF     
Sbjct: 675  S-------PVHHH---HVGSAPAVNPSLWDRRHAYSGESPETSGFHLGSLGSVGFPGSSP 724

Query: 547  --PSEFTPRNYLR-DGNHISNFFNSALSPPQRLSDFLPGVNLVASAPTSFCAPKERMRNP 717
              P E     +    GN +    N  L  PQ++    PG N + S P+SF  P ER+RN 
Sbjct: 725  LHPLEMASHIFPHVGGNCMDISANVGLRSPQQICHVFPGRNSMLSIPSSFDLPMERVRNL 784

Query: 718  SNCRSEADSCHADKMKYELDIDRVLRREDNRTTLMIKNIPNKYTSKMLLATIDEQHRGTY 897
            S+ R+EA+S H DK +YELDIDR+LR ED RTTLMIKNIPNKYTSKMLLA IDE HRGTY
Sbjct: 785  SHRRTEANSNHTDKKQYELDIDRILRGEDCRTTLMIKNIPNKYTSKMLLAAIDEHHRGTY 844

Query: 898  DFIYLPIDFKNKCNMGYAFINMIDSLQIIPFYKTFNGKKWDKFNSGKVASIAYARIQGKA 1077
            DFIYLPIDFKNKCN+GYAF+NMID L I+PF++ FNGKKW+KFNS KVAS+AYARIQGK 
Sbjct: 845  DFIYLPIDFKNKCNVGYAFVNMIDPLHIVPFHQAFNGKKWEKFNSEKVASLAYARIQGKT 904

Query: 1078 ALVAHFQNSSLMNEDKRCRPILFHSEASEAGEQ 1176
            AL+AHFQNSSLMNEDKRCRPILFH++   AG+Q
Sbjct: 905  ALIAHFQNSSLMNEDKRCRPILFHTDGPNAGDQ 937


>emb|CBI15756.3| unnamed protein product [Vitis vinifera]
          Length = 998

 Score =  381 bits (978), Expect = e-103
 Identities = 206/393 (52%), Positives = 253/393 (64%), Gaps = 16/393 (4%)
 Frame = +1

Query: 46   EYYDRSAHVISYNPFSTVPNLSNDANPRILEGINDRNGYIVDPKGQQAELHAGVFGSSWT 225
            EY+D  A+ I YN  ST+ +++    PRI EGI++R+ + V   G   EL+ G FGSS  
Sbjct: 562  EYHDNLANAIRYNSSSTIGDMTGHVGPRITEGIDNRHIHRVGSNGHPIELNGGAFGSSGN 621

Query: 226  NGCSIPEDHYLKGTSNTFQQFSSSPLGWPNSLPLANGIRAHCTQNLPGLSRSSSNTLNTV 405
              C +   H   G S+++Q  SSSP+ WPNS   +NG+ A     +PG  R   + LN V
Sbjct: 622  GSCPVHGLHRAWGNSSSYQHHSSSPMIWPNSPSFSNGVHAQRPTQVPGFPRPPPHMLNIV 681

Query: 406  SHSRDLMNKVSHTRLCHDGSVPASNLSRWNSEYAY-----------LDSIGRLGFHDK-- 546
            S        V H    H GS PA N S W+  +AY           L S+G +GF     
Sbjct: 682  S-------PVHHH---HVGSAPAVNPSLWDRRHAYSGESPETSGFHLGSLGSVGFPGSSP 731

Query: 547  --PSEFTPRNYLR-DGNHISNFFNSALSPPQRLSDFLPGVNLVASAPTSFCAPKERMRNP 717
              P E     +    GN +    N  L  PQ++    PG N + S P+SF  P ER+RN 
Sbjct: 732  LHPLEMASHIFPHVGGNCMDISANVGLRSPQQICHVFPGRNSMLSIPSSFDLPMERVRNL 791

Query: 718  SNCRSEADSCHADKMKYELDIDRVLRREDNRTTLMIKNIPNKYTSKMLLATIDEQHRGTY 897
            S+ R+EA+S H DK +YELDIDR+LR ED RTTLMIKNIPNKYTSKMLLA IDE HRGTY
Sbjct: 792  SHRRTEANSNHTDKKQYELDIDRILRGEDCRTTLMIKNIPNKYTSKMLLAAIDEHHRGTY 851

Query: 898  DFIYLPIDFKNKCNMGYAFINMIDSLQIIPFYKTFNGKKWDKFNSGKVASIAYARIQGKA 1077
            DFIYLPIDFKNKCN+GYAF+NMID L I+PF++ FNGKKW+KFNS KVAS+AYARIQGK 
Sbjct: 852  DFIYLPIDFKNKCNVGYAFVNMIDPLHIVPFHQAFNGKKWEKFNSEKVASLAYARIQGKT 911

Query: 1078 ALVAHFQNSSLMNEDKRCRPILFHSEASEAGEQ 1176
            AL+AHFQNSSLMNEDKRCRPILFH++   AG+Q
Sbjct: 912  ALIAHFQNSSLMNEDKRCRPILFHTDGPNAGDQ 944


>ref|XP_002511091.1| RNA-binding protein, putative [Ricinus communis]
            gi|223550206|gb|EEF51693.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 972

 Score =  359 bits (921), Expect = 9e-97
 Identities = 198/389 (50%), Positives = 247/389 (63%), Gaps = 13/389 (3%)
 Frame = +1

Query: 46   EYYDRSAHVISYNPFSTVPNLSNDANPRILEGINDRNGYIVDPKGQQAELHAGVFGSSWT 225
            EY D  A+ + +N  S++  +++    ++ EGI+ R+   V   G   EL+ GVFGSS  
Sbjct: 550  EYPDGLANGVPFNSSSSIGGMAHSVGSKVTEGISSRHIQAVSSNGHLMELNGGVFGSSG- 608

Query: 226  NGCSIPEDHYLKGTSNTFQQFSSSPLGWPNSLPLANGIRAHCTQNLPGLSRSSSNTLNTV 405
            NG S+P  HY+   SNT QQ  SS + WPNS    NG+ AH   ++PG  R+    LNTV
Sbjct: 609  NG-SLPGHHYMWNNSNTNQQHHSSRMIWPNSSSFTNGVHAHHLPHMPGFPRAPPVMLNTV 667

Query: 406  SHSRDLMNKVSHTRLCHDGSVPASNLSRWNSEYAY-----------LDSIGRLGFHDKPS 552
                            H GS P+ N S W   +AY           L S+G +G    P 
Sbjct: 668  PAHH------------HVGSAPSVNPSVWERRHAYAGESPEASSFHLGSLGSVG-SPHPM 714

Query: 553  EFTPRNYLRD--GNHISNFFNSALSPPQRLSDFLPGVNLVASAPTSFCAPKERMRNPSNC 726
            E    N      GN +    N+ L   Q +    PG N + S P SF +P ER+RN S+ 
Sbjct: 715  EIASHNIFSHVGGNCMDMTKNAGLRTAQPMCHIFPGRNPMISMPASFDSPNERVRNLSHR 774

Query: 727  RSEADSCHADKMKYELDIDRVLRREDNRTTLMIKNIPNKYTSKMLLATIDEQHRGTYDFI 906
            R +++  H+DK +YELD+DR++R ED+RTTLMIKNIPNKYTSKMLLA IDE  RGTYDFI
Sbjct: 775  RIDSNPNHSDKKQYELDLDRIMRGEDSRTTLMIKNIPNKYTSKMLLAAIDEYCRGTYDFI 834

Query: 907  YLPIDFKNKCNMGYAFINMIDSLQIIPFYKTFNGKKWDKFNSGKVASIAYARIQGKAALV 1086
            YLPIDFKNKCN+GYAFINMID  QIIPF+K FNGKKW+KFNS KVAS+AYARIQGK+AL+
Sbjct: 835  YLPIDFKNKCNVGYAFINMIDPQQIIPFHKAFNGKKWEKFNSEKVASLAYARIQGKSALI 894

Query: 1087 AHFQNSSLMNEDKRCRPILFHSEASEAGE 1173
            AHFQNSSLMNEDKRCRPILFH++   AG+
Sbjct: 895  AHFQNSSLMNEDKRCRPILFHTDGPNAGD 923


>ref|XP_002321750.1| predicted protein [Populus trichocarpa] gi|222868746|gb|EEF05877.1|
            predicted protein [Populus trichocarpa]
          Length = 919

 Score =  350 bits (899), Expect = 3e-94
 Identities = 195/402 (48%), Positives = 242/402 (60%), Gaps = 26/402 (6%)
 Frame = +1

Query: 46   EYYDRSAHVISYNPFSTVPNLSNDANPRILEGINDRNGYIVDPKGQQAELHAGVFGSSWT 225
            EY+D  A+ I YN  ST+ ++ +    ++ EGIN  +   V   G   EL+ GVFGS  T
Sbjct: 490  EYHDSFANTIPYNSPSTIRDMPSSFTSKVTEGINSLHIRGVGSNGHMMELNGGVFGSPGT 549

Query: 226  NGCSIPEDHYLKGTSNTFQQFSSSPLGWPNSLPLANGIRAHCTQNLPGLSRSSSNTLNTV 405
              C++P  HY+   S + QQ  S+ + W NS   ANG+ AH   ++PG  R  +  LN+ 
Sbjct: 550  GSCTLPGHHYVWKNSKSGQQHPSNAMIWSNSPSFANGVHAHHVPHMPGFPRGHTVMLNSA 609

Query: 406  SHSRDLMNKVSHTRLCHDGSVPASNLSRWNSEYAY-----------LDSIGRLGFHDK-- 546
                            H GS PA N S W+    +           L ++G +GF     
Sbjct: 610  PAPH------------HIGSAPAVNPSLWDRRQTFSGESPEASSFHLGALGSVGFPGSSP 657

Query: 547  --PSEFTPRNYLRDGNHISNFFN-SALSPPQRLSDFLPGVNLVASAPTSFCAPKERMRNP 717
              P E    N    G    +    + L    ++    PG N + S P SF +P ER+RN 
Sbjct: 658  PHPMEIASHNIFSHGGSCMDMTKGTGLPASPQMCQMFPGRNPMISMPASFGSPNERVRNF 717

Query: 718  SNCRSEADSCHADKMKYELDIDRVLRREDNRTTLMIKNIPNKYTSKMLLATIDEQHRGTY 897
            S+ R E++S H+DK +YELDID +LR +DNRTTLMIKNIPNKYTSKMLLA IDEQ RGTY
Sbjct: 718  SHRRIESNSNHSDKKQYELDIDCILRGDDNRTTLMIKNIPNKYTSKMLLAAIDEQCRGTY 777

Query: 898  DFIYLPIDFK----------NKCNMGYAFINMIDSLQIIPFYKTFNGKKWDKFNSGKVAS 1047
            DFIYLPIDFK          NKCN+GYAFINMID  QIIPF+K FNGKKW+KFNS KVAS
Sbjct: 778  DFIYLPIDFKASEFSGGSTLNKCNVGYAFINMIDPQQIIPFHKAFNGKKWEKFNSEKVAS 837

Query: 1048 IAYARIQGKAALVAHFQNSSLMNEDKRCRPILFHSEASEAGE 1173
            +AYARIQGK AL+AHFQNSSLMNEDKRCRPILFHS+   AG+
Sbjct: 838  LAYARIQGKTALIAHFQNSSLMNEDKRCRPILFHSDGPNAGD 879


>ref|XP_002267714.2| PREDICTED: protein MEI2-like 4-like [Vitis vinifera]
          Length = 965

 Score =  314 bits (805), Expect = 3e-83
 Identities = 196/397 (49%), Positives = 233/397 (58%), Gaps = 20/397 (5%)
 Frame = +1

Query: 46   EYYDRSAHVISYNPFSTVPNLSNDANPRILEGINDRNGYIVDPKGQQAELHAGVFGSSWT 225
            EY D  A+    NP  T   ++ + NPR  E I +R     +  G   EL+ GVFGSS  
Sbjct: 536  EYNDGLANGAPCNPVGT---MAANINPRP-ERIENRQLSGANSNGLTVELNDGVFGSSGN 591

Query: 226  NGCSIPEDHYLKGTSNTFQQFSSSPLGWPNSLPLANGI-RAHCTQNLPGLSRSSSNTLNT 402
              C +P  HY+   S+  Q   S  + WPNS    NGI  AH    L GL R+ S+ LNT
Sbjct: 592  GSCPLPGHHYMWSNSHHPQ---SPGMMWPNSPSFMNGIGTAHPPPRLHGLPRAPSHMLNT 648

Query: 403  VSHSRDLMNKVSHTRLCHDGSVPASNLSRWNSEYAYL-DSIGRLGFHD------------ 543
                  +++  +H    H GS P  N S W+  + Y  +S    GFH             
Sbjct: 649  ------MLSINNH----HVGSAPTVNPSIWDRRHTYAGESSEASGFHPGSLGSMRISNNS 698

Query: 544  -KPSEFTPRNYLRD--GNHISNFF---NSALSPPQRLSDFLPGVNLVASAPTSFCAPKER 705
              P EF P N      GN I       N  L    +     PG + +    +SF  P ER
Sbjct: 699  LHPLEFAPHNIFPSVGGNCIDLSIPPKNVGLHSHHQRCLMFPGRSQLIPMMSSFDPPNER 758

Query: 706  MRNPSNCRSEADSCHADKMKYELDIDRVLRREDNRTTLMIKNIPNKYTSKMLLATIDEQH 885
             R+  N  S       +K +YELDIDR+LR ED RTTLMIKNIPNKYTSKMLLA IDE+H
Sbjct: 759  SRSRRNDNSSNQV--DNKKQYELDIDRILRGEDTRTTLMIKNIPNKYTSKMLLAAIDERH 816

Query: 886  RGTYDFIYLPIDFKNKCNMGYAFINMIDSLQIIPFYKTFNGKKWDKFNSGKVASIAYARI 1065
            RGTYDFIYLPIDFKNKCN+GYAFINM D  QIIPFY+ FNGKKW+KFNS KVAS+AYARI
Sbjct: 817  RGTYDFIYLPIDFKNKCNVGYAFINMTDPCQIIPFYQAFNGKKWEKFNSEKVASLAYARI 876

Query: 1066 QGKAALVAHFQNSSLMNEDKRCRPILFHSEASEAGEQ 1176
            QGKAAL+AHFQNSSLMNEDKRCRPILFH++   AG+Q
Sbjct: 877  QGKAALIAHFQNSSLMNEDKRCRPILFHTDGPNAGDQ 913


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