BLASTX nr result
ID: Bupleurum21_contig00001395
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00001395
(1925 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280516.1| PREDICTED: pentatricopeptide repeat-containi... 764 0.0
emb|CBI20759.3| unnamed protein product [Vitis vinifera] 717 0.0
ref|XP_002515341.1| pentatricopeptide repeat-containing protein,... 714 0.0
emb|CAN81324.1| hypothetical protein VITISV_041843 [Vitis vinifera] 712 0.0
ref|XP_002330760.1| predicted protein [Populus trichocarpa] gi|2... 707 0.0
>ref|XP_002280516.1| PREDICTED: pentatricopeptide repeat-containing protein At5g10690-like
[Vitis vinifera]
Length = 609
Score = 764 bits (1972), Expect = 0.0
Identities = 388/586 (66%), Positives = 470/586 (80%), Gaps = 3/586 (0%)
Frame = -1
Query: 1856 IAASNQLSSS--SCCYCFVNVPKNVSNSHTQTLIHSNPPNLKPLTSRIVRLTRRRQLNQI 1683
+A S+ L SS S P+ +S+ Q L H PNLK LTSRIV+LTRRRQL+QI
Sbjct: 14 LALSSGLRSSFPSSATIRCRFPRKLSSDVPQNLSHK--PNLKRLTSRIVQLTRRRQLDQI 71
Query: 1682 LEEIEVAKKRHGKLNTIVMNAVLQACVHCGDIDSALRIFADMCKSESCGVDNVTYGTLLK 1503
EEIE+AK+RHGKLNTIVMNAV++ACVHCGD+D AL++F +M K ESCGVDNVTYGTLLK
Sbjct: 72 FEEIEIAKRRHGKLNTIVMNAVMEACVHCGDVDLALKVFGEMTKPESCGVDNVTYGTLLK 131
Query: 1502 GLGDAGRIDESFQVLESVEQGTAVGSPTLSAPLIYGLLNALIEAGDLRRANGLLARYGFV 1323
GLG+A RID++FQ+LESVEQGTAVGSP LSAPL+ LLNAL EAGDLRRANGLLARYG V
Sbjct: 132 GLGEARRIDDAFQLLESVEQGTAVGSPELSAPLVCSLLNALTEAGDLRRANGLLARYGSV 191
Query: 1322 LNEGGNYSILIYNLLMKGYISTGSPQAALRVFDEIRQQGLSPDKLTYNTIIFACVRMNNL 1143
L+E G+ SIL+YNLLMKGYI+ G P AAL V DEI QQGL PD+LTYNT+IFACV+ L
Sbjct: 192 LHEDGSPSILMYNLLMKGYITAGFPMAALSVHDEILQQGLKPDRLTYNTLIFACVKTEKL 251
Query: 1142 EAAVQFFQEMKDRSQKDGHVDLRPDIVTYTTLLKGFGQAGDLYAIVNIVREMKLCNYLSI 963
+ A+++F+EMK+ +QK VDL PD +TYTTLLKGFG A DL ++ IV EMK N L +
Sbjct: 252 DTAMRYFEEMKENAQKTIDVDLFPDAITYTTLLKGFGHAKDLLSVQKIVMEMKSSNNLFV 311
Query: 962 DRVAYTSIVDVLLACGSIKGALCVFGEILKKVGKDRRLRPKPHLYLSLMRALAVEGEYDL 783
DR AYT+IVD LL CGS KGALC+FGEI+K+ G++ LRPKPHLY+S+M ALA G+Y+L
Sbjct: 312 DRTAYTAIVDALLNCGSSKGALCMFGEIIKRAGQNFNLRPKPHLYISMMSALAARGDYNL 371
Query: 782 VKNLHKRMWLDTAGSISSEIHIEADHLLMEAALNDSQLDVAVHYLSNIIRDWNGISWNSR 603
VK+LHKRM D+AG+IS + IEAD LLMEAALND Q+D A H+LSNII W GI W SR
Sbjct: 372 VKSLHKRMRPDSAGTISPAVQIEADQLLMEAALNDGQVDAATHHLSNIITRWKGICWRSR 431
Query: 602 GGMVAARIEALLGFTSSMFDPYLLPQVSITDAIECIMVPLQEACPLQATVRLNQVVMRFY 423
GGMVA R+EALLGFT SMF PYLLPQVS D IE IM+P +EA PL AT+ L +VVMRFY
Sbjct: 432 GGMVAVRLEALLGFTRSMFSPYLLPQVSPADPIENIMMPFEEARPLLATLDLKRVVMRFY 491
Query: 422 RDSSVPIIDEWGSCVGILHAEDCNELNAPLSAMMKSPAPCVSATTSIGRVVDLMLEKRYK 243
+DS VP+ID+WGSCVG+LH EDC EL+AP+S MM+SP PCV+ TTSIGRV DL+LEKRYK
Sbjct: 492 KDSVVPVIDDWGSCVGLLHREDCRELDAPVSTMMRSPPPCVTTTTSIGRVADLILEKRYK 551
Query: 242 MVIIVRYGNAFG-TYNSTSRTVGVFTADQLYKLTLPASNLSIQQYP 108
MV++V+Y N +G +Y+S+ R VGVFT++QL+KL + AS + Q++P
Sbjct: 552 MVVVVKYSNLYGSSYSSSLRAVGVFTSEQLFKLAI-ASEMPGQEFP 596
>emb|CBI20759.3| unnamed protein product [Vitis vinifera]
Length = 570
Score = 717 bits (1852), Expect = 0.0
Identities = 364/538 (67%), Positives = 432/538 (80%), Gaps = 2/538 (0%)
Frame = -1
Query: 1856 IAASNQLSSS--SCCYCFVNVPKNVSNSHTQTLIHSNPPNLKPLTSRIVRLTRRRQLNQI 1683
+A S+ L SS S P+ +S+ Q L H PNLK LTSRIV+LTRRRQL+QI
Sbjct: 31 LALSSGLRSSFPSSATIRCRFPRKLSSDVPQNLSHK--PNLKRLTSRIVQLTRRRQLDQI 88
Query: 1682 LEEIEVAKKRHGKLNTIVMNAVLQACVHCGDIDSALRIFADMCKSESCGVDNVTYGTLLK 1503
EEIE+AK+RHGKLNTIVMNAV++ACVHCGD+D AL++F +M K ESCGVDNVTYGTLLK
Sbjct: 89 FEEIEIAKRRHGKLNTIVMNAVMEACVHCGDVDLALKVFGEMTKPESCGVDNVTYGTLLK 148
Query: 1502 GLGDAGRIDESFQVLESVEQGTAVGSPTLSAPLIYGLLNALIEAGDLRRANGLLARYGFV 1323
GLG+A RID++FQ+LESVEQGTAVGSP LSAPL+ LLNAL EAGDLRRANGLLARYG V
Sbjct: 149 GLGEARRIDDAFQLLESVEQGTAVGSPELSAPLVCSLLNALTEAGDLRRANGLLARYGSV 208
Query: 1322 LNEGGNYSILIYNLLMKGYISTGSPQAALRVFDEIRQQGLSPDKLTYNTIIFACVRMNNL 1143
L+E G+ SIL+YNLLMKGYI+ G P AAL V DEI QQGL PD+LTYNT+IFACV+ L
Sbjct: 209 LHEDGSPSILMYNLLMKGYITAGFPMAALSVHDEILQQGLKPDRLTYNTLIFACVKTEKL 268
Query: 1142 EAAVQFFQEMKDRSQKDGHVDLRPDIVTYTTLLKGFGQAGDLYAIVNIVREMKLCNYLSI 963
+ A+++F+EMK+ +QK VDL PD +TYTTLLKGFG A DL ++ IV EMK N L +
Sbjct: 269 DTAMRYFEEMKENAQKTIDVDLFPDAITYTTLLKGFGHAKDLLSVQKIVMEMKSSNNLFV 328
Query: 962 DRVAYTSIVDVLLACGSIKGALCVFGEILKKVGKDRRLRPKPHLYLSLMRALAVEGEYDL 783
DR AYT+IVD LL CGS KGALC+FGEI+K+ G++ LRPKPHLY+S+M ALA G+Y+L
Sbjct: 329 DRTAYTAIVDALLNCGSSKGALCMFGEIIKRAGQNFNLRPKPHLYISMMSALAARGDYNL 388
Query: 782 VKNLHKRMWLDTAGSISSEIHIEADHLLMEAALNDSQLDVAVHYLSNIIRDWNGISWNSR 603
VK+LHKRM D+AG+IS + IEAD LLMEAALND Q+D A H+LSNII W GI W SR
Sbjct: 389 VKSLHKRMRPDSAGTISPAVQIEADQLLMEAALNDGQVDAATHHLSNIITRWKGICWRSR 448
Query: 602 GGMVAARIEALLGFTSSMFDPYLLPQVSITDAIECIMVPLQEACPLQATVRLNQVVMRFY 423
GGMVA R+EALLGFT SMF PYLLPQVS D IE IM+P +EA PL AT+ L +VVMRFY
Sbjct: 449 GGMVAVRLEALLGFTRSMFSPYLLPQVSPADPIENIMMPFEEARPLLATLDLKRVVMRFY 508
Query: 422 RDSSVPIIDEWGSCVGILHAEDCNELNAPLSAMMKSPAPCVSATTSIGRVVDLMLEKR 249
+DS VP+ID+WGSCVG+LH EDC EL+AP+S MM+SP PCV+ TTSIGRV DL+LEKR
Sbjct: 509 KDSVVPVIDDWGSCVGLLHREDCRELDAPVSTMMRSPPPCVTTTTSIGRVADLILEKR 566
>ref|XP_002515341.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545285|gb|EEF46790.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 600
Score = 714 bits (1842), Expect = 0.0
Identities = 352/548 (64%), Positives = 439/548 (80%)
Frame = -1
Query: 1757 SNPPNLKPLTSRIVRLTRRRQLNQILEEIEVAKKRHGKLNTIVMNAVLQACVHCGDIDSA 1578
S NLK LTSR+V+LTRRRQL QI EEIEVAK R GKLN IVMNAV++ACVHCG+IDSA
Sbjct: 40 SRNSNLKQLTSRVVQLTRRRQLQQIFEEIEVAKTRFGKLNKIVMNAVMEACVHCGNIDSA 99
Query: 1577 LRIFADMCKSESCGVDNVTYGTLLKGLGDAGRIDESFQVLESVEQGTAVGSPTLSAPLIY 1398
LR+F +M K S GVD VTYGTLLKGLG+A RIDE+FQ+LES+EQG+A G+ LSAP++
Sbjct: 100 LRLFEEMSKPGSSGVDGVTYGTLLKGLGEARRIDEAFQILESLEQGSAKGNVKLSAPIVV 159
Query: 1397 GLLNALIEAGDLRRANGLLARYGFVLNEGGNYSILIYNLLMKGYISTGSPQAALRVFDEI 1218
GLLNA+IEAGDLRRANGLLARYGF+L EGG+ +LIYNLLMKGYI+ G PQAA+ + +EI
Sbjct: 160 GLLNAIIEAGDLRRANGLLARYGFLLREGGSAPVLIYNLLMKGYINAGCPQAAVAMRNEI 219
Query: 1217 RQQGLSPDKLTYNTIIFACVRMNNLEAAVQFFQEMKDRSQKDGHVDLRPDIVTYTTLLKG 1038
Q GL+PD+LTYNT+I ACV+ +L+AA+ FF+EMKD +++ +V+L PD+VTYTTLLKG
Sbjct: 220 LQLGLTPDRLTYNTLILACVKSKSLDAAMSFFEEMKDEARQTNNVNLYPDVVTYTTLLKG 279
Query: 1037 FGQAGDLYAIVNIVREMKLCNYLSIDRVAYTSIVDVLLACGSIKGALCVFGEILKKVGKD 858
FG A DL ++ IV EMKL + L IDR +T++VD LL GSIKGALC+FGEI+K+ G +
Sbjct: 280 FGNAKDLGSVKMIVLEMKLYHNLFIDRTGFTAMVDALLNSGSIKGALCIFGEIIKRAGVN 339
Query: 857 RRLRPKPHLYLSLMRALAVEGEYDLVKNLHKRMWLDTAGSISSEIHIEADHLLMEAALND 678
LRPKPHLYLS+MRA AV+G+Y +VKNLHKR+W D+ G+IS I EADHLLMEAALN
Sbjct: 340 PDLRPKPHLYLSMMRAFAVQGDYSMVKNLHKRLWPDSTGTISPAIQQEADHLLMEAALNG 399
Query: 677 SQLDVAVHYLSNIIRDWNGISWNSRGGMVAARIEALLGFTSSMFDPYLLPQVSITDAIEC 498
Q+D A+ L II WNGISW +RGGMVA RIEALLGF S+F PYLLPQ+S ++ IE
Sbjct: 400 GQVDAALENLRKIIPRWNGISWTNRGGMVAVRIEALLGFRKSIFSPYLLPQISSSEPIET 459
Query: 497 IMVPLQEACPLQATVRLNQVVMRFYRDSSVPIIDEWGSCVGILHAEDCNELNAPLSAMMK 318
IM PL+EA PL T+ L +VVMRF+RD VPI+D+WG+C+G+LH EDC ELNA L+ MM+
Sbjct: 460 IMTPLEEAQPLLGTLELKKVVMRFFRDEVVPIMDDWGNCIGLLHREDCTELNATLATMMR 519
Query: 317 SPAPCVSATTSIGRVVDLMLEKRYKMVIIVRYGNAFGTYNSTSRTVGVFTADQLYKLTLP 138
SP PCV+ TSIG VVDL+L+K+Y+MV++++Y N S+SR VGVFTA++LYKL P
Sbjct: 520 SPPPCVTTMTSIGHVVDLILDKKYRMVVVIKYSNLDSITYSSSRAVGVFTAEKLYKLAKP 579
Query: 137 ASNLSIQQ 114
S L +++
Sbjct: 580 VSELFVRE 587
>emb|CAN81324.1| hypothetical protein VITISV_041843 [Vitis vinifera]
Length = 1120
Score = 712 bits (1837), Expect = 0.0
Identities = 365/565 (64%), Positives = 443/565 (78%), Gaps = 1/565 (0%)
Frame = -1
Query: 1799 PKNVSNSHTQTLIHSNPPNLKPLTSRIVRLTRRRQLNQILEEIEVAKKRHGKLNTIVMNA 1620
P+ +S+ Q L H PNLK LTSRIV+LTRRRQL+QI EEIE+AK+RHGKLNTIVMNA
Sbjct: 35 PRKLSSDVPQNLSHK--PNLKRLTSRIVQLTRRRQLDQIFEEIEIAKRRHGKLNTIVMNA 92
Query: 1619 VLQACVHCGDIDSALRIFADMCKSESCGVDNVTYGTLLKGLGDAGRIDESFQVLESVEQG 1440
V++ACVHCGD+D AL++F +M K ESCGVDNVTYGTLLKGLG+A RID++FQ+LESVEQG
Sbjct: 93 VMEACVHCGDVDLALKVFDEMTKPESCGVDNVTYGTLLKGLGEARRIDDAFQLLESVEQG 152
Query: 1439 TAVGSPTLSAPLIYGLLNALIEAGDLRRANGLLARYGFVLNEGGNYSILIYNLLMKGYIS 1260
TAVGSP LSAPL+ LLNAL EAGDLRRANGLLARYG VL+E G+ SIL+YNLLMKGYI+
Sbjct: 153 TAVGSPELSAPLVCSLLNALTEAGDLRRANGLLARYGSVLHEDGSPSILMYNLLMKGYIT 212
Query: 1259 TGSPQAALRVFDEIRQQGLSPDKLTYNTIIFACVRMNNLEAAVQFFQEMKDRSQKDGHVD 1080
G P AAL V DEI QQGL PD+LTYNT+IFACV+ L+ A+++F+EMK+ +QK VD
Sbjct: 213 AGFPMAALSVHDEILQQGLKPDRLTYNTLIFACVKTEKLDTAMRYFEEMKENAQKTIDVD 272
Query: 1079 LRPDIVTYTTLLKGFGQAGDLYAIVNIVREMKLCNYLSIDRVAYTSIVDVLLACGSIKGA 900
L PD +TYTTLLKGFG A DL ++ IV EMK N L +DR AYT+IVD LL CGS KGA
Sbjct: 273 LFPDAITYTTLLKGFGHAKDLLSVQKIVMEMKSSNNLFVDRTAYTAIVDALLNCGSSKGA 332
Query: 899 LCVFGEILKKVGKDRRLRPKPHLYLSLMRALAVEGEYDLVKNLHKRMWLDTAGSISSEIH 720
LC+FGEI+K+ G++ LRPKPHLY+S+M ALA G+Y+LVK+LHKRM D+AG+IS +
Sbjct: 333 LCIFGEIIKRAGQNFNLRPKPHLYISMMSALAARGDYNLVKSLHKRMRPDSAGTISPAVQ 392
Query: 719 IEADHLLMEAALNDSQLDVAVHYLSNIIRDWNGISWNSRGGMVAARIEALLGFTSSMFDP 540
IEAD LLMEAALND G VA R+EALLGFT SMF P
Sbjct: 393 IEADQLLMEAALND--------------------------GQVAVRLEALLGFTRSMFSP 426
Query: 539 YLLPQVSITDAIECIMVPLQEACPLQATVRLNQVVMRFYRDSSVPIIDEWGSCVGILHAE 360
YLLPQVS D IE IM+P +EA PL AT+ L +VVMRFY+DS VP+ID+WGSCVG+LH E
Sbjct: 427 YLLPQVSPADPIENIMMPFEEARPLLATLDLKRVVMRFYKDSVVPVIDDWGSCVGLLHHE 486
Query: 359 DCNELNAPLSAMMKSPAPCVSATTSIGRVVDLMLEKRYKMVIIVRYGNAFG-TYNSTSRT 183
DC EL+AP+S MM+SP PCV+ TTSIGRV DL+LEKRYKMV++V+Y N +G +Y+S+ R
Sbjct: 487 DCRELDAPVSTMMRSPPPCVTTTTSIGRVADLILEKRYKMVVVVKYSNLYGSSYSSSLRA 546
Query: 182 VGVFTADQLYKLTLPASNLSIQQYP 108
VGVFT++QL+KL + AS + Q++P
Sbjct: 547 VGVFTSEQLFKLAM-ASEMPGQEFP 570
>ref|XP_002330760.1| predicted protein [Populus trichocarpa] gi|222872562|gb|EEF09693.1|
predicted protein [Populus trichocarpa]
Length = 607
Score = 707 bits (1824), Expect = 0.0
Identities = 357/593 (60%), Positives = 453/593 (76%), Gaps = 8/593 (1%)
Frame = -1
Query: 1892 MVQQRIGAFSNRIAASNQLSSSSCCYCFVNVPKNVSNSHTQTLIHSNPPNLKPLTSRIVR 1713
M + +S + +SN L + + + + P T+ H +LK LT RIV+
Sbjct: 1 MQNHLLSLYSTKFPSSNPLPTFKITFSYSSTP-------TRRRFHKPHHSLKRLTFRIVQ 53
Query: 1712 LTRRRQLNQILEEIEVAKKRHGKLNTIVMNAVLQACVHCGDIDSALRIFADMCKSESCGV 1533
LTRRRQL QI EE+E AK+R+GKLNTIVMNAV++ACVHCGD +SAL++F +MCKSESCGV
Sbjct: 54 LTRRRQLEQIFEEVESAKRRYGKLNTIVMNAVMEACVHCGDTESALKVFDEMCKSESCGV 113
Query: 1532 DNVTYGTLLKGLGDAGRIDESFQVLESVEQGTAVGSPTLSAPLIYGLLNALIEAGDLRRA 1353
D V+YGTLLKGLG A RIDE+FQ+LESVE GTAVGSP LSAP+I+GLLNALI AGD+RRA
Sbjct: 114 DGVSYGTLLKGLGVARRIDEAFQILESVEMGTAVGSPKLSAPMIFGLLNALISAGDIRRA 173
Query: 1352 NGLLARYGFVLNEGGNYSILIYNLLMKGYISTGSPQAALRVFDEIRQQGLSPDKLTYNTI 1173
GLLARYG++L+E N SIL+YNLLMKGYIS G PQ AL V DEI + GL+PD+LTYNT+
Sbjct: 174 KGLLARYGYLLHESCNPSILVYNLLMKGYISAGCPQDALPVHDEILELGLTPDRLTYNTL 233
Query: 1172 IFACVRMNNLEAAVQFFQEMKDRSQKDGHVDLRPDIVTYTTLLKGFGQAGDLYAIVNIVR 993
I ACV+ L+AA+QFF EMKD++Q L PD+VTYTTLL+GFG A DL +++ IV
Sbjct: 234 ISACVKAGKLDAAMQFFDEMKDKAQNFSRDKLYPDVVTYTTLLQGFGGAKDLLSVLKIVY 293
Query: 992 EMKLCNYLSIDRVAYTSIVDVLLACGSIKGALCVFGEILKKVGKDRRLRPKPHLYLSLMR 813
EMK+ L IDR A+T++VD LL CGS+ GA+CVFGEI+K+ G + +LRPKPHLYLSLMR
Sbjct: 294 EMKMHRNLVIDRTAFTAMVDALLNCGSMNGAVCVFGEIIKRAGVNPKLRPKPHLYLSLMR 353
Query: 812 ALAVEGEYDLVKNLHKRMWLDTAGSISSEIHIEADHLLMEAALNDSQLDVAVHYLSNIIR 633
A A +G+Y++VKNLHKR+W D++G+IS + EADHLLMEAALND Q++VA+ L+N++
Sbjct: 354 AFASQGDYNMVKNLHKRLWPDSSGAISLALQEEADHLLMEAALNDGQVNVALENLTNVVL 413
Query: 632 DWNGISWN-------SRGGMVAARIEALLGFTSSMFDPYLLPQVSITDAIECIMVPLQEA 474
W I W + G +VA RIE LLGFT+S+F PYLLPQVS ++ IE IM+PL+ A
Sbjct: 414 KWKRIPWTIVPNPQFTCGMLVAMRIEVLLGFTNSIFSPYLLPQVSPSEPIESIMMPLKAA 473
Query: 473 CPLQATVRLNQVVMRFYRDSSVPIIDEWGSCVGILHAEDCNELNAPLSAMMKSPAPCVSA 294
PL T+ L +VVMRF+ D VPI+D+WGSCVG+LH EDC ELNAPL MM+SP PCV+
Sbjct: 474 KPLLGTLHLKKVVMRFFWDQVVPIVDDWGSCVGLLHREDCTELNAPLMTMMRSPPPCVTT 533
Query: 293 TTSIGRVVDLMLEKRYKMVIIVRYGNAFGTYNST-SRTVGVFTADQLYKLTLP 138
TTSIG VVDL+LEK Y+MV++V+Y N + NS+ S+TVGVFT +QL+KL +P
Sbjct: 534 TTSIGHVVDLILEKMYRMVVVVKYSNLNSSTNSSGSKTVGVFTTEQLFKLVVP 586