BLASTX nr result

ID: Bupleurum21_contig00001388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001388
         (1063 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW90603.1| 40S ribosomal protein S5 [Solanum tuberosum]           285   2e-79
gb|AAR89617.1| 40S ribosomal protein S5 [Capsicum annuum]             284   5e-79
ref|XP_002281550.1| PREDICTED: 40S ribosomal protein S5 isoform ...   263   7e-73
ref|XP_002266736.1| PREDICTED: 40S ribosomal protein S5 isoform ...   259   2e-71
ref|XP_004139502.1| PREDICTED: 40S ribosomal protein S5-1-like i...   258   3e-71

>gb|AFW90603.1| 40S ribosomal protein S5 [Solanum tuberosum]
          Length = 219

 Score =  285 bits (730), Expect(2) = 2e-79
 Identities = 140/154 (90%), Positives = 147/154 (95%)
 Frame = +1

Query: 163 ENLVHTDVMLFNRWSYDDVTVEDLSLEDYITATAAKHPTYMPHTAGRYQAKRFRKAQCPI 342
           EN +HTDVMLFNRWSYD V + D+S+EDYITATA KHP YMPHTAGRYQAKRFRKAQCPI
Sbjct: 24  ENKIHTDVMLFNRWSYDGVEINDMSVEDYITATANKHPVYMPHTAGRYQAKRFRKAQCPI 83

Query: 343 VERMTNSLMMHGRNNGKKLLAVRIIKHAMEIIHLLTDQNPIQVMVTAVINSGPREDATRI 522
           VER+TNSLMMHGRNNGKKL+AVRIIKHAMEIIHLLTDQNPIQV+V AVINSGPREDATRI
Sbjct: 84  VERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRI 143

Query: 523 GSAGVVRRQAVDISPLRRVNQAIYLLTTGARESA 624
           GSAGVVRRQAVDISPLRRVNQAIYLLTTGARESA
Sbjct: 144 GSAGVVRRQAVDISPLRRVNQAIYLLTTGARESA 177



 Score = 38.1 bits (87), Expect(2) = 2e-79
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +2

Query: 746 SYAIKKKDEIERVAKANR 799
           SYAIKKKDEIERVAKANR
Sbjct: 202 SYAIKKKDEIERVAKANR 219


>gb|AAR89617.1| 40S ribosomal protein S5 [Capsicum annuum]
          Length = 212

 Score =  284 bits (726), Expect(2) = 5e-79
 Identities = 140/154 (90%), Positives = 147/154 (95%)
 Frame = +1

Query: 163 ENLVHTDVMLFNRWSYDDVTVEDLSLEDYITATAAKHPTYMPHTAGRYQAKRFRKAQCPI 342
           E+ VHTDVMLFNRWSYD V + D+S+EDYITATA KHP YMPHTAGRYQAKRFRKAQCPI
Sbjct: 17  ESKVHTDVMLFNRWSYDGVDINDMSVEDYITATANKHPVYMPHTAGRYQAKRFRKAQCPI 76

Query: 343 VERMTNSLMMHGRNNGKKLLAVRIIKHAMEIIHLLTDQNPIQVMVTAVINSGPREDATRI 522
           VER+TNSLMMHGRNNGKKL+AVRIIKHAMEIIHLLTDQNPIQV+V AVINSGPREDATRI
Sbjct: 77  VERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRI 136

Query: 523 GSAGVVRRQAVDISPLRRVNQAIYLLTTGARESA 624
           GSAGVVRRQAVDISPLRRVNQAIYLLTTGARESA
Sbjct: 137 GSAGVVRRQAVDISPLRRVNQAIYLLTTGARESA 170



 Score = 38.1 bits (87), Expect(2) = 5e-79
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +2

Query: 746 SYAIKKKDEIERVAKANR 799
           SYAIKKKDEIERVAKANR
Sbjct: 195 SYAIKKKDEIERVAKANR 212


>ref|XP_002281550.1| PREDICTED: 40S ribosomal protein S5 isoform 2 [Vitis vinifera]
           gi|225441585|ref|XP_002281538.1| PREDICTED: 40S
           ribosomal protein S5 isoform 1 [Vitis vinifera]
           gi|297739774|emb|CBI29956.3| unnamed protein product
           [Vitis vinifera]
          Length = 208

 Score =  263 bits (673), Expect(2) = 7e-73
 Identities = 129/153 (84%), Positives = 139/153 (90%)
 Frame = +1

Query: 166 NLVHTDVMLFNRWSYDDVTVEDLSLEDYITATAAKHPTYMPHTAGRYQAKRFRKAQCPIV 345
           NL  T V LFNRWS+D+V + D+SLEDYI    AKH TY+PHTAGRY  KRFRKAQCPIV
Sbjct: 14  NLQETTVKLFNRWSFDEVQISDISLEDYIAVNPAKHATYVPHTAGRYSVKRFRKAQCPIV 73

Query: 346 ERMTNSLMMHGRNNGKKLLAVRIIKHAMEIIHLLTDQNPIQVMVTAVINSGPREDATRIG 525
           ER+TNSLMMHGRNNGKKL+AVRIIKHAMEIIHLLT+QNPIQV+V AVINSGPREDATRIG
Sbjct: 74  ERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTEQNPIQVIVDAVINSGPREDATRIG 133

Query: 526 SAGVVRRQAVDISPLRRVNQAIYLLTTGARESA 624
           SAGVVRRQAVDISPLRR+NQAIYLLTTGARESA
Sbjct: 134 SAGVVRRQAVDISPLRRINQAIYLLTTGARESA 166



 Score = 38.1 bits (87), Expect(2) = 7e-73
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +2

Query: 746 SYAIKKKDEIERVAKANR 799
           SYAIKKKDEIERVAKANR
Sbjct: 191 SYAIKKKDEIERVAKANR 208


>ref|XP_002266736.1| PREDICTED: 40S ribosomal protein S5 isoform 1 [Vitis vinifera]
           gi|296085149|emb|CBI28644.3| unnamed protein product
           [Vitis vinifera]
          Length = 204

 Score =  259 bits (661), Expect(2) = 2e-71
 Identities = 127/155 (81%), Positives = 139/155 (89%)
 Frame = +1

Query: 160 DENLVHTDVMLFNRWSYDDVTVEDLSLEDYITATAAKHPTYMPHTAGRYQAKRFRKAQCP 339
           D+    T+V LFNRWS+D+V + D+SL DY+    AKH TY+PHTAGRY  KRFRKAQCP
Sbjct: 8   DDEKKPTEVKLFNRWSFDEVQIGDMSLLDYVAVNPAKHATYVPHTAGRYSVKRFRKAQCP 67

Query: 340 IVERMTNSLMMHGRNNGKKLLAVRIIKHAMEIIHLLTDQNPIQVMVTAVINSGPREDATR 519
           IVER+TNSLMMHGRNNGKKL+AVRI+KHAMEIIHLLTDQNPIQV+V AVINSGPREDATR
Sbjct: 68  IVERLTNSLMMHGRNNGKKLMAVRIMKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATR 127

Query: 520 IGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESA 624
           IGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESA
Sbjct: 128 IGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESA 162



 Score = 38.1 bits (87), Expect(2) = 2e-71
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +2

Query: 746 SYAIKKKDEIERVAKANR 799
           SYAIKKKDEIERVAKANR
Sbjct: 187 SYAIKKKDEIERVAKANR 204


>ref|XP_004139502.1| PREDICTED: 40S ribosomal protein S5-1-like isoform 1 [Cucumis
           sativus] gi|449443476|ref|XP_004139503.1| PREDICTED: 40S
           ribosomal protein S5-1-like isoform 2 [Cucumis sativus]
          Length = 207

 Score =  258 bits (659), Expect(2) = 3e-71
 Identities = 126/150 (84%), Positives = 136/150 (90%)
 Frame = +1

Query: 175 HTDVMLFNRWSYDDVTVEDLSLEDYITATAAKHPTYMPHTAGRYQAKRFRKAQCPIVERM 354
           H DV LFNRW++DDV V D+SL DY+    AKH TY+PHTAGRY  KRFRKAQCPIVER+
Sbjct: 16  HHDVKLFNRWTFDDVQVNDISLVDYVGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERL 75

Query: 355 TNSLMMHGRNNGKKLLAVRIIKHAMEIIHLLTDQNPIQVMVTAVINSGPREDATRIGSAG 534
           TNSLMMHGRNNGKKL+AVRIIKHAMEIIHLLTD NPIQV+V AV+NSGPREDATRIGSAG
Sbjct: 76  TNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAG 135

Query: 535 VVRRQAVDISPLRRVNQAIYLLTTGARESA 624
           VVRRQAVDISPLRRVNQAIYLLTTGARE+A
Sbjct: 136 VVRRQAVDISPLRRVNQAIYLLTTGAREAA 165



 Score = 38.1 bits (87), Expect(2) = 3e-71
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +2

Query: 746 SYAIKKKDEIERVAKANR 799
           SYAIKKKDEIERVAKANR
Sbjct: 190 SYAIKKKDEIERVAKANR 207


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