BLASTX nr result

ID: Bupleurum21_contig00001374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001374
         (1063 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19742.3| unnamed protein product [Vitis vinifera]              482   e-134
ref|XP_003634371.1| PREDICTED: uncharacterized protein LOC100855...   481   e-133
ref|XP_002300754.1| predicted protein [Populus trichocarpa] gi|2...   448   e-124
ref|XP_002510429.1| conserved hypothetical protein [Ricinus comm...   444   e-122
ref|XP_002307674.1| predicted protein [Populus trichocarpa] gi|2...   432   e-119

>emb|CBI19742.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  482 bits (1240), Expect = e-134
 Identities = 238/328 (72%), Positives = 275/328 (83%), Gaps = 4/328 (1%)
 Frame = -1

Query: 982  DMSSVQGPVVCPATVRSKQTGAYTLPVNGSLMKNRVFRSGFWGFKKLNGSMINVGNQPR- 806
            +M ++QGPV+CP TVR+K+ G YTLPV+  L K ++FRSGFWGF+   G     G+ P  
Sbjct: 28   EMGTLQGPVICP-TVRAKEAGVYTLPVSLPLKKTKIFRSGFWGFRGNCGGRTKAGSVPHQ 86

Query: 805  --LQKGRVVKCTFXXXXXXXXSTAENFNENEADYVNSSVTEAVEVKSSADGFMIKMRDGR 632
               +K + ++C+F        S AENFNEN+ DYVNSSV EAVEVKS ADGFMIKMRDGR
Sbjct: 87   LHTRKCKTLQCSFSSSSDGNGSMAENFNENDEDYVNSSVVEAVEVKSGADGFMIKMRDGR 146

Query: 631  HLRCAHNNPHGGHLPDYAPHPAIVLKMEDGTGLLFPIIVLEMPSALLMAALHNVQIARPT 452
            HLRC HNNP GGH+PDYAPHPAIVLKMEDGTGLL PIIVLEMPS LLMAA+ NVQIARPT
Sbjct: 147  HLRCVHNNPQGGHMPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQIARPT 206

Query: 451  MYHVVMEMIEKMGYAVKLVRITRRVHEAYYSKLYLTKLGDETENITFDMRPSDAINIAVR 272
            +Y V+ EMI+KMGYAVKLVR+T+RVHEAY+++LYLTK+G+E E+++FD+RPSDAINIAVR
Sbjct: 207  LYQVMKEMIDKMGYAVKLVRVTKRVHEAYFAQLYLTKVGNEKESVSFDLRPSDAINIAVR 266

Query: 271  CKVPIQVNKDLAYSDGMRIIESAKL-FPGSSSDGFLLTELDRPSGQPCSETKEFDLLRNM 95
            CKVPIQVNK LAYSDGMR+IESAK+    SSSDG L TELDRPSGQPC ETKEFDL+RNM
Sbjct: 267  CKVPIQVNKYLAYSDGMRVIESAKVSVQASSSDGLLFTELDRPSGQPCIETKEFDLVRNM 326

Query: 94   LIAAIEERYRDAAQWRDKLTQFRSKMNW 11
            LIAA+EERYRDAAQWRDKLTQFRSK NW
Sbjct: 327  LIAAVEERYRDAAQWRDKLTQFRSKRNW 354


>ref|XP_003634371.1| PREDICTED: uncharacterized protein LOC100855103 [Vitis vinifera]
          Length = 327

 Score =  481 bits (1238), Expect = e-133
 Identities = 238/327 (72%), Positives = 274/327 (83%), Gaps = 4/327 (1%)
 Frame = -1

Query: 979 MSSVQGPVVCPATVRSKQTGAYTLPVNGSLMKNRVFRSGFWGFKKLNGSMINVGNQPR-- 806
           M ++QGPV+CP TVR+K+ G YTLPV+  L K ++FRSGFWGF+   G     G+ P   
Sbjct: 1   MGTLQGPVICP-TVRAKEAGVYTLPVSLPLKKTKIFRSGFWGFRGNCGGRTKAGSVPHQL 59

Query: 805 -LQKGRVVKCTFXXXXXXXXSTAENFNENEADYVNSSVTEAVEVKSSADGFMIKMRDGRH 629
             +K + ++C+F        S AENFNEN+ DYVNSSV EAVEVKS ADGFMIKMRDGRH
Sbjct: 60  HTRKCKTLQCSFSSSSDGNGSMAENFNENDEDYVNSSVVEAVEVKSGADGFMIKMRDGRH 119

Query: 628 LRCAHNNPHGGHLPDYAPHPAIVLKMEDGTGLLFPIIVLEMPSALLMAALHNVQIARPTM 449
           LRC HNNP GGH+PDYAPHPAIVLKMEDGTGLL PIIVLEMPS LLMAA+ NVQIARPT+
Sbjct: 120 LRCVHNNPQGGHMPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQIARPTL 179

Query: 448 YHVVMEMIEKMGYAVKLVRITRRVHEAYYSKLYLTKLGDETENITFDMRPSDAINIAVRC 269
           Y V+ EMI+KMGYAVKLVR+T+RVHEAY+++LYLTK+G+E E+++FD+RPSDAINIAVRC
Sbjct: 180 YQVMKEMIDKMGYAVKLVRVTKRVHEAYFAQLYLTKVGNEKESVSFDLRPSDAINIAVRC 239

Query: 268 KVPIQVNKDLAYSDGMRIIESAKL-FPGSSSDGFLLTELDRPSGQPCSETKEFDLLRNML 92
           KVPIQVNK LAYSDGMR+IESAK+    SSSDG L TELDRPSGQPC ETKEFDL+RNML
Sbjct: 240 KVPIQVNKYLAYSDGMRVIESAKVSVQASSSDGLLFTELDRPSGQPCIETKEFDLVRNML 299

Query: 91  IAAIEERYRDAAQWRDKLTQFRSKMNW 11
           IAA+EERYRDAAQWRDKLTQFRSK NW
Sbjct: 300 IAAVEERYRDAAQWRDKLTQFRSKRNW 326


>ref|XP_002300754.1| predicted protein [Populus trichocarpa] gi|222842480|gb|EEE80027.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  448 bits (1153), Expect = e-124
 Identities = 221/322 (68%), Positives = 258/322 (80%)
 Frame = -1

Query: 979 MSSVQGPVVCPATVRSKQTGAYTLPVNGSLMKNRVFRSGFWGFKKLNGSMINVGNQPRLQ 800
           M S+QGPV+CP TVR+KQ G +  P+ G L+K R+ RS  WGFK     +     Q + +
Sbjct: 1   MVSLQGPVICP-TVRAKQAGKHAFPMTGPLVKARLVRSELWGFKGYKTKVGLTSRQLKAR 59

Query: 799 KGRVVKCTFXXXXXXXXSTAENFNENEADYVNSSVTEAVEVKSSADGFMIKMRDGRHLRC 620
           +   V+C+         STAENFNEN+ DYVNSSV EAVEVKS +DGF+IKMRDGRHLRC
Sbjct: 60  RCNTVQCSLSSSSDGNGSTAENFNENDEDYVNSSVVEAVEVKSGSDGFVIKMRDGRHLRC 119

Query: 619 AHNNPHGGHLPDYAPHPAIVLKMEDGTGLLFPIIVLEMPSALLMAALHNVQIARPTMYHV 440
            HNNP GGHLPDYAPHPAIVLKMEDGTGLL PIIVLEMPS LLMAA+ NVQIARPTMY V
Sbjct: 120 VHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQIARPTMYQV 179

Query: 439 VMEMIEKMGYAVKLVRITRRVHEAYYSKLYLTKLGDETENITFDMRPSDAINIAVRCKVP 260
           V +M+EKMG+ VKLVR+T+RVHEAY+++LYLTK+G+ETE ++FD+RPSDAINIAVRCKVP
Sbjct: 180 VKDMVEKMGFEVKLVRVTKRVHEAYFAQLYLTKIGNETECVSFDLRPSDAINIAVRCKVP 239

Query: 259 IQVNKDLAYSDGMRIIESAKLFPGSSSDGFLLTELDRPSGQPCSETKEFDLLRNMLIAAI 80
           IQVNK LAYSDGMR+IES K     +SDG L TELDRP+GQPC +TKEF+L+RNM  AA 
Sbjct: 240 IQVNKYLAYSDGMRVIESGKPIQSPASDGILFTELDRPTGQPCLDTKEFNLVRNMFTAAF 299

Query: 79  EERYRDAAQWRDKLTQFRSKMN 14
           EERY DAAQWRDKL QFR+K N
Sbjct: 300 EERYGDAAQWRDKLGQFRAKRN 321


>ref|XP_002510429.1| conserved hypothetical protein [Ricinus communis]
           gi|223551130|gb|EEF52616.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 327

 Score =  444 bits (1141), Expect = e-122
 Identities = 218/323 (67%), Positives = 260/323 (80%), Gaps = 1/323 (0%)
 Frame = -1

Query: 979 MSSVQGPVVCPATVRSKQTGAYTLPVNGSLMKNRVFRSGFWGFKKLNGSMINV-GNQPRL 803
           M+S+QGPV+CPA VR+KQ G YTLP+N  L K R+ RSG W FK ++     + G  P+ 
Sbjct: 1   MTSLQGPVICPA-VRAKQAGTYTLPLNVPLFKARLVRSGLWRFKGISDYKTKLTGFSPQQ 59

Query: 802 QKGRVVKCTFXXXXXXXXSTAENFNENEADYVNSSVTEAVEVKSSADGFMIKMRDGRHLR 623
            +   ++C          +TAENFN N+ DYV+SSV EAVEVKS ADGFMIKMRDGRH+R
Sbjct: 60  ARNTTLQCCLSSSSNGNGNTAENFNVNDEDYVHSSVVEAVEVKSGADGFMIKMRDGRHVR 119

Query: 622 CAHNNPHGGHLPDYAPHPAIVLKMEDGTGLLFPIIVLEMPSALLMAALHNVQIARPTMYH 443
           C HNNP GGHLPDYAPHPAIVLKMEDGTGLL PIIVLEMPS LLMAA+ NVQIARPT+Y 
Sbjct: 120 CVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQIARPTLYQ 179

Query: 442 VVMEMIEKMGYAVKLVRITRRVHEAYYSKLYLTKLGDETENITFDMRPSDAINIAVRCKV 263
           VV EMIEKMGY V+LVR+T+RVHEAY+++LYLTK+G+ET+ ++FD+RPSDAINIAVRCKV
Sbjct: 180 VVKEMIEKMGYEVRLVRVTKRVHEAYFAQLYLTKVGNETQCVSFDLRPSDAINIAVRCKV 239

Query: 262 PIQVNKDLAYSDGMRIIESAKLFPGSSSDGFLLTELDRPSGQPCSETKEFDLLRNMLIAA 83
           PIQVNK LAYSDGMR+IES K+     SDG L TELDRP+GQPC +TKEF+L+ N++ A 
Sbjct: 240 PIQVNKYLAYSDGMRVIESGKITHSPGSDGLLFTELDRPTGQPCLDTKEFNLVSNLMNAV 299

Query: 82  IEERYRDAAQWRDKLTQFRSKMN 14
           +EERY+DAAQWRD L QFR+K N
Sbjct: 300 VEERYQDAAQWRDMLGQFRAKRN 322


>ref|XP_002307674.1| predicted protein [Populus trichocarpa] gi|222857123|gb|EEE94670.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score =  432 bits (1110), Expect = e-119
 Identities = 224/325 (68%), Positives = 256/325 (78%), Gaps = 3/325 (0%)
 Frame = -1

Query: 979 MSSVQGPVVCPATVRSKQTGAYTLPVNGSLMKNRVFRSGFWGFKKLNGSMINVGNQPRLQ 800
           M S+QGPV+ PA VR+KQ G Y+ P+ G L+K  + RS   GFK L+G    V    R  
Sbjct: 1   MGSLQGPVIYPA-VRAKQAGTYSFPMTGPLVKGWLIRSELRGFKGLSGCKSKVVLTSRQL 59

Query: 799 KGR---VVKCTFXXXXXXXXSTAENFNENEADYVNSSVTEAVEVKSSADGFMIKMRDGRH 629
           K R   VV+C+         STAENFNEN  DYVNSSV EAVEVKS +DGF+IKMRDGRH
Sbjct: 60  KARRCSVVQCSLSSSSDGNGSTAENFNENHGDYVNSSVVEAVEVKSGSDGFVIKMRDGRH 119

Query: 628 LRCAHNNPHGGHLPDYAPHPAIVLKMEDGTGLLFPIIVLEMPSALLMAALHNVQIARPTM 449
           LRC HNNP GGHLPD APHPAIVLKMEDGTGLL PIIVLEMPS LLMAA+ NVQIARPTM
Sbjct: 120 LRCVHNNPQGGHLPDNAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQIARPTM 179

Query: 448 YHVVMEMIEKMGYAVKLVRITRRVHEAYYSKLYLTKLGDETENITFDMRPSDAINIAVRC 269
           Y VV EM+EKMGY VKLVR+T+RVHEAY+++LYLTK+G+ETE ++FD+RPSDAINIAVRC
Sbjct: 180 YQVVKEMVEKMGYEVKLVRVTKRVHEAYFAQLYLTKIGNETECVSFDLRPSDAINIAVRC 239

Query: 268 KVPIQVNKDLAYSDGMRIIESAKLFPGSSSDGFLLTELDRPSGQPCSETKEFDLLRNMLI 89
           KVPIQVNK LAYSDGMR++ + K       +G L TELDRP+GQPC +TKEFDL+RNML 
Sbjct: 240 KVPIQVNKYLAYSDGMRVM-NLKANSVPCFNGLLFTELDRPTGQPCLDTKEFDLVRNMLT 298

Query: 88  AAIEERYRDAAQWRDKLTQFRSKMN 14
           AAIEERY DAAQWRDKL QFR+K N
Sbjct: 299 AAIEERYGDAAQWRDKLGQFRAKRN 323


Top