BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001355
         (1255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265695.1| PREDICTED: psbP domain-containing protein 4,...   391   e-106
ref|XP_002526176.1| Thylakoid lumenal 29.8 kDa protein, chloropl...   378   e-102
ref|XP_002300943.1| predicted protein [Populus trichocarpa] gi|2...   375   e-101
ref|XP_003526671.1| PREDICTED: psbP domain-containing protein 4,...   355   2e-95
ref|XP_003523403.1| PREDICTED: psbP domain-containing protein 4,...   350   6e-94

>ref|XP_002265695.1| PREDICTED: psbP domain-containing protein 4, chloroplastic [Vitis
           vinifera] gi|302142754|emb|CBI19957.3| unnamed protein
           product [Vitis vinifera]
          Length = 279

 Score =  391 bits (1005), Expect = e-106
 Identities = 200/280 (71%), Positives = 226/280 (80%), Gaps = 8/280 (2%)
 Frame = -3

Query: 986 MGTIVFSSCCFSPKHNHKIVHSH------TAGKGLSRTKLSAADSGKHE--EFVNEESDL 831
           MGT +F+SC FS +++H I+ SH      +  KGLS  K +A D+ ++   EFV+EE++ 
Sbjct: 1   MGTSIFTSCSFSWRNHHHIIPSHRFLSHSSPDKGLSVAK-AAVDTRQNGCVEFVDEETEK 59

Query: 830 NQGIVKRRXXXXXXXXXXXXXXXXLPREGLAVVKQGLLAGRIPGLSEPDEQGWRTYRRPD 651
             G +KRR                 PREGLAVVKQGLLAGR+PGLSEPDEQGWRTYRRPD
Sbjct: 60  FSGFLKRRSAIVSGVSLISSAVLGFPREGLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPD 119

Query: 650 EKSGGHGVGWSPIIPYLFSVPQEWEEVPVSIADLGGTEIDLRFGSPKEGRLFVIVAPVLR 471
           EKSGGHGVGWSPIIPY+FSVP  WEEVPVSIADLGGTEIDLRF + KEGRLFVIVAPVLR
Sbjct: 120 EKSGGHGVGWSPIIPYIFSVPSGWEEVPVSIADLGGTEIDLRFANSKEGRLFVIVAPVLR 179

Query: 470 FADNLGDNATIEKIGPPEKVINAFGPEAIGENVEGKVQSMEVKEYSGRKYYQFELEPPHA 291
           FADNLGD+A +EKIGPPEKVI AFGPE IGENVEGKV SM V E+SGR YYQFELEPPH 
Sbjct: 180 FADNLGDDAKVEKIGPPEKVIAAFGPEVIGENVEGKVLSMGVVEHSGRTYYQFELEPPHV 239

Query: 290 LITATAAGNRLYLFTVTANGLQWKRHYKDLKRISDTFRVV 171
           LITATAAGNRLYLF+VTA+GLQWKRHYKDLK+I+D+FRVV
Sbjct: 240 LITATAAGNRLYLFSVTASGLQWKRHYKDLKKIADSFRVV 279


>ref|XP_002526176.1| Thylakoid lumenal 29.8 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223534553|gb|EEF36252.1| Thylakoid
           lumenal 29.8 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 270

 Score =  378 bits (970), Expect = e-102
 Identities = 192/274 (70%), Positives = 212/274 (77%), Gaps = 2/274 (0%)
 Frame = -3

Query: 986 MGTIVFSSCCFSPKHNHK--IVHSHTAGKGLSRTKLSAADSGKHEEFVNEESDLNQGIVK 813
           MGT +F+SC F  K++H+  +  SH  G     T +S   +         E +   G++K
Sbjct: 1   MGTTIFTSCSFPWKYHHQQMVPSSHLLGHSSQETGVSRIRA----TIEPREFEKPIGLLK 56

Query: 812 RRXXXXXXXXXXXXXXXXLPREGLAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGH 633
           RR                 P +GLA VKQGLLAGRIPGLSEPDEQGWRTYRRPD+KSGGH
Sbjct: 57  RRSALVSGISLASSTILGFPGDGLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDDKSGGH 116

Query: 632 GVGWSPIIPYLFSVPQEWEEVPVSIADLGGTEIDLRFGSPKEGRLFVIVAPVLRFADNLG 453
           GVGWSPIIPY F VPQEWEEVPVSIADLGGTEIDLRF S KEGRLFVIVAPVLRFAD+LG
Sbjct: 117 GVGWSPIIPYAFKVPQEWEEVPVSIADLGGTEIDLRFSSSKEGRLFVIVAPVLRFADDLG 176

Query: 452 DNATIEKIGPPEKVINAFGPEAIGENVEGKVQSMEVKEYSGRKYYQFELEPPHALITATA 273
           DNATIE+IGPPEKVINAFGPE IGENVEGKV SM V E+SGR YYQFELEPPH LITATA
Sbjct: 177 DNATIERIGPPEKVINAFGPEVIGENVEGKVLSMNVAEHSGRMYYQFELEPPHVLITATA 236

Query: 272 AGNRLYLFTVTANGLQWKRHYKDLKRISDTFRVV 171
           AGNRLYLF+VT NGLQWKRHYKDLKRI+++FRVV
Sbjct: 237 AGNRLYLFSVTGNGLQWKRHYKDLKRIAESFRVV 270


>ref|XP_002300943.1| predicted protein [Populus trichocarpa] gi|222842669|gb|EEE80216.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score =  375 bits (962), Expect = e-101
 Identities = 191/278 (68%), Positives = 219/278 (78%), Gaps = 6/278 (2%)
 Frame = -3

Query: 986 MGTIVFSSCCFSPKHNHKIVH------SHTAGKGLSRTKLSAADSGKHEEFVNEESDLNQ 825
           MGT + +SC    +++H+ +       SH+     SR K++A    +   F++ E++ + 
Sbjct: 1   MGTTLLTSCGIQWRYHHQQIVPDNHLLSHSQESFPSRAKITA--ESRKNGFLDGENEKSA 58

Query: 824 GIVKRRXXXXXXXXXXXXXXXXLPREGLAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEK 645
           G +KRR                   EGLAVVKQGLLAGRIPGLSEPD+QGWRTYRRPD+K
Sbjct: 59  GFLKRRSVLVSGVSLVSTSVLGSAGEGLAVVKQGLLAGRIPGLSEPDDQGWRTYRRPDDK 118

Query: 644 SGGHGVGWSPIIPYLFSVPQEWEEVPVSIADLGGTEIDLRFGSPKEGRLFVIVAPVLRFA 465
           SGGHGVGWSPIIPYLFSVPQ WEEVPVSIADLGGTEIDLRFGS KEGRLFVIVAPVLRFA
Sbjct: 119 SGGHGVGWSPIIPYLFSVPQGWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVLRFA 178

Query: 464 DNLGDNATIEKIGPPEKVINAFGPEAIGENVEGKVQSMEVKEYSGRKYYQFELEPPHALI 285
           D LG+NATIE+IGPPEKVINAFGPE IGENVEGKV SM V+E+SGR+YYQ+ELEPPHALI
Sbjct: 179 DYLGENATIEQIGPPEKVINAFGPEVIGENVEGKVLSMNVEEHSGRRYYQYELEPPHALI 238

Query: 284 TATAAGNRLYLFTVTANGLQWKRHYKDLKRISDTFRVV 171
           TATAAGNRLYLF VT NGLQWKRHY+DLKRI+ +FRVV
Sbjct: 239 TATAAGNRLYLFNVTGNGLQWKRHYQDLKRIAYSFRVV 276


>ref|XP_003526671.1| PREDICTED: psbP domain-containing protein 4, chloroplastic-like
           [Glycine max]
          Length = 271

 Score =  355 bits (910), Expect = 2e-95
 Identities = 190/277 (68%), Positives = 207/277 (74%), Gaps = 1/277 (0%)
 Frame = -3

Query: 998 TKALMGTIVFSSCCFSPKHNHKIV-HSHTAGKGLSRTKLSAADSGKHEEFVNEESDLNQG 822
           T AL  T V   C   P+H H I+  S T   G  RT ++A+ S K    +  E   +  
Sbjct: 3   TTALSTTSVL--CRRKPQHMHIILPSSQTLQNGTLRTDVTASAS-KDNISIESEKCCSSL 59

Query: 821 IVKRRXXXXXXXXXXXXXXXXLPREGLAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKS 642
           +V RR                 P E LAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKS
Sbjct: 60  LVNRRTVLASGVSLLGF-----PGESLAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKS 114

Query: 641 GGHGVGWSPIIPYLFSVPQEWEEVPVSIADLGGTEIDLRFGSPKEGRLFVIVAPVLRFAD 462
           GGHGVGWSPIIPY F VP+EWEEVPVSIADLGGTEIDLRF S KEGRLFVIVAPVLRF+D
Sbjct: 115 GGHGVGWSPIIPYSFRVPKEWEEVPVSIADLGGTEIDLRFASSKEGRLFVIVAPVLRFSD 174

Query: 461 NLGDNATIEKIGPPEKVINAFGPEAIGENVEGKVQSMEVKEYSGRKYYQFELEPPHALIT 282
           +LGDNATIEKIGPPEKVINAFGPE IGENVEGKV S  V E+ GR YYQFELEPPH  IT
Sbjct: 175 DLGDNATIEKIGPPEKVINAFGPEMIGENVEGKVLSANVAEHEGRTYYQFELEPPHIFIT 234

Query: 281 ATAAGNRLYLFTVTANGLQWKRHYKDLKRISDTFRVV 171
           ATAAGNRLYLF VT +GLQWKRHY DLK+I+++FRVV
Sbjct: 235 ATAAGNRLYLFGVTGSGLQWKRHYDDLKKIAESFRVV 271


>ref|XP_003523403.1| PREDICTED: psbP domain-containing protein 4, chloroplastic-like
           [Glycine max]
          Length = 267

 Score =  350 bits (897), Expect = 6e-94
 Identities = 182/265 (68%), Positives = 200/265 (75%), Gaps = 1/265 (0%)
 Frame = -3

Query: 962 CCFSPKHNHKIV-HSHTAGKGLSRTKLSAADSGKHEEFVNEESDLNQGIVKRRXXXXXXX 786
           C  +P+H H I   S T   G  RT  ++A        ++ ESD    ++  R       
Sbjct: 12  CWRNPQHMHIISPSSQTLQNGTLRTVAASASKD-----ISIESDKCSSLLVNRRTILASG 66

Query: 785 XXXXXXXXXLPREGLAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIP 606
                     P E LAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIP
Sbjct: 67  VSLLSF----PGESLAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIP 122

Query: 605 YLFSVPQEWEEVPVSIADLGGTEIDLRFGSPKEGRLFVIVAPVLRFADNLGDNATIEKIG 426
           Y F VP+EWEEVPVSIADLGGTEIDLRF S KEGRLFVIVAPVLRF+D+LGDNATIEKIG
Sbjct: 123 YSFRVPEEWEEVPVSIADLGGTEIDLRFASSKEGRLFVIVAPVLRFSDDLGDNATIEKIG 182

Query: 425 PPEKVINAFGPEAIGENVEGKVQSMEVKEYSGRKYYQFELEPPHALITATAAGNRLYLFT 246
           PPEKVINAFGPE IGENVEGKV S+   E+ GR YYQFELEPPH  ITATAAGNRLYLF 
Sbjct: 183 PPEKVINAFGPEMIGENVEGKVLSVSAAEHEGRTYYQFELEPPHIFITATAAGNRLYLFG 242

Query: 245 VTANGLQWKRHYKDLKRISDTFRVV 171
           VT +GLQWKRHY DLK+I+++FRVV
Sbjct: 243 VTGSGLQWKRHYNDLKKIAESFRVV 267