BLASTX nr result

ID: Bupleurum21_contig00001340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001340
         (910 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB72241.1| omega-3 fatty acid desaturase [Petroselinum crispum]   328   8e-88
gb|AAN62759.2| omega-3 fatty acid desaturase [Solanum lycopersicum]   312   8e-83
ref|NP_001234592.1| omega-3 fatty acid desaturase [Solanum lycop...   312   8e-83
gb|ABG49414.1| chloroplast omega-3 fatty acid desaturase [Jatrop...   311   1e-82
gb|ABE72960.1| chloroplast omega-3 fatty acid desaturase [Jatrop...   311   1e-82

>gb|AAB72241.1| omega-3 fatty acid desaturase [Petroselinum crispum]
          Length = 438

 Score =  328 bits (842), Expect = 8e-88
 Identities = 146/155 (94%), Positives = 153/155 (98%)
 Frame = +3

Query: 330 VENDESWHPLTEKLFNSLDDVTRKFRFTLPFTMLAYPFYLWGRSPGKKGSHYNPNSDLFV 509
           VENDESWHPL+EKLFNSLDD+TRKFRFTLPF MLAYPFYLWGRSPGKKGSHY+P+SDLFV
Sbjct: 205 VENDESWHPLSEKLFNSLDDLTRKFRFTLPFPMLAYPFYLWGRSPGKKGSHYDPSSDLFV 264

Query: 510 PNERKDVITSTVCWTAMAALLVGLNFVLGPLQMLKLYGIPYWIFVMWLDFVTYLHHHGHD 689
           PNERKDVITSTVCWTAMAALLVGLNFV+GP++ML LYGIPYWIFVMWLDFVTYLHHHGHD
Sbjct: 265 PNERKDVITSTVCWTAMAALLVGLNFVMGPVKMLMLYGIPYWIFVMWLDFVTYLHHHGHD 324

Query: 690 DKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDI 794
           DKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDI
Sbjct: 325 DKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDI 359



 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 40/54 (74%), Positives = 42/54 (77%)
 Frame = +1

Query: 1   IVFGLXXXXXXXXXXXXWPLYWIAQGTMFWAIFVLGHDCGHGSFSNDSKLNSVV 162
           IVFGL            WPLYWIAQGTMFWA+FVLGHDCGHGSFSND+KLNSVV
Sbjct: 123 IVFGLAVAASFVNNWAVWPLYWIAQGTMFWALFVLGHDCGHGSFSNDAKLNSVV 176


>gb|AAN62759.2| omega-3 fatty acid desaturase [Solanum lycopersicum]
          Length = 435

 Score =  312 bits (799), Expect = 8e-83
 Identities = 136/155 (87%), Positives = 151/155 (97%)
 Frame = +3

Query: 330 VENDESWHPLTEKLFNSLDDVTRKFRFTLPFTMLAYPFYLWGRSPGKKGSHYNPNSDLFV 509
           VENDESWHPL+EKL+NSLDD+T+KFRFTLPF +LAYPFYLWGRSPGKKGSH++PNSDLFV
Sbjct: 202 VENDESWHPLSEKLYNSLDDITKKFRFTLPFPLLAYPFYLWGRSPGKKGSHFDPNSDLFV 261

Query: 510 PNERKDVITSTVCWTAMAALLVGLNFVLGPLQMLKLYGIPYWIFVMWLDFVTYLHHHGHD 689
            +E+KDVITSTVCWTAMAALLVGL+FV+GPLQMLKLYGIPYW FV+WLD VTYLHHHGH+
Sbjct: 262 ASEKKDVITSTVCWTAMAALLVGLSFVMGPLQMLKLYGIPYWGFVIWLDLVTYLHHHGHE 321

Query: 690 DKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDI 794
           DK+PWYRG+EWSYLRGGLTTLDRDYGWINNIHHDI
Sbjct: 322 DKVPWYRGEEWSYLRGGLTTLDRDYGWINNIHHDI 356



 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 34/53 (64%), Positives = 36/53 (67%)
 Frame = +1

Query: 1   IVFGLXXXXXXXXXXXXWPLYWIAQGTMFWAIFVLGHDCGHGSFSNDSKLNSV 159
           IVFGL            WPLYW AQ TMFWA+F LGHDCGHGSFSN+  LNSV
Sbjct: 120 IVFGLAAAAAYFNNWLVWPLYWFAQSTMFWALFALGHDCGHGSFSNNHSLNSV 172


>ref|NP_001234592.1| omega-3 fatty acid desaturase [Solanum lycopersicum]
           gi|32442202|gb|AAP82170.1| omega-3 fatty acid desaturase
           [Solanum lycopersicum] gi|32479366|gb|AAP82169.2|
           omega-3 fatty acid desaturase [Solanum lycopersicum]
          Length = 435

 Score =  312 bits (799), Expect = 8e-83
 Identities = 136/155 (87%), Positives = 151/155 (97%)
 Frame = +3

Query: 330 VENDESWHPLTEKLFNSLDDVTRKFRFTLPFTMLAYPFYLWGRSPGKKGSHYNPNSDLFV 509
           VENDESWHPL+EKL+NSLDD+T+KFRFTLPF +LAYPFYLWGRSPGKKGSH++PNSDLFV
Sbjct: 202 VENDESWHPLSEKLYNSLDDITKKFRFTLPFPLLAYPFYLWGRSPGKKGSHFDPNSDLFV 261

Query: 510 PNERKDVITSTVCWTAMAALLVGLNFVLGPLQMLKLYGIPYWIFVMWLDFVTYLHHHGHD 689
            +E+KDVITSTVCWTAMAALLVGL+FV+GPLQMLKLYGIPYW FV+WLD VTYLHHHGH+
Sbjct: 262 ASEKKDVITSTVCWTAMAALLVGLSFVMGPLQMLKLYGIPYWGFVIWLDLVTYLHHHGHE 321

Query: 690 DKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDI 794
           DK+PWYRG+EWSYLRGGLTTLDRDYGWINNIHHDI
Sbjct: 322 DKVPWYRGEEWSYLRGGLTTLDRDYGWINNIHHDI 356



 Score = 79.7 bits (195), Expect = 9e-13
 Identities = 35/53 (66%), Positives = 37/53 (69%)
 Frame = +1

Query: 1   IVFGLXXXXXXXXXXXXWPLYWIAQGTMFWAIFVLGHDCGHGSFSNDSKLNSV 159
           IVFGL            WPLYW AQ TMFWA+FVLGHDCGHGSFSN+  LNSV
Sbjct: 120 IVFGLAAAAAYFNNWLVWPLYWFAQSTMFWALFVLGHDCGHGSFSNNHSLNSV 172


>gb|ABG49414.1| chloroplast omega-3 fatty acid desaturase [Jatropha curcas]
          Length = 455

 Score =  311 bits (797), Expect = 1e-82
 Identities = 134/155 (86%), Positives = 149/155 (96%)
 Frame = +3

Query: 330 VENDESWHPLTEKLFNSLDDVTRKFRFTLPFTMLAYPFYLWGRSPGKKGSHYNPNSDLFV 509
           VENDESWHPL+EK+F SLD++T+  RFTLPF +LAYPFYLWGRSPGKKGSH++P+SDLFV
Sbjct: 220 VENDESWHPLSEKIFKSLDNLTKMLRFTLPFPLLAYPFYLWGRSPGKKGSHFHPDSDLFV 279

Query: 510 PNERKDVITSTVCWTAMAALLVGLNFVLGPLQMLKLYGIPYWIFVMWLDFVTYLHHHGHD 689
           PNERKD+ITST CW+AMAALLVGLNF+LGP+QMLKLYGIPYWIFVMWLD VTYLHHHGH+
Sbjct: 280 PNERKDIITSTACWSAMAALLVGLNFILGPIQMLKLYGIPYWIFVMWLDLVTYLHHHGHE 339

Query: 690 DKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDI 794
           DKLPWYRGKEWSYLRGGLTT+DRDYGWINNIHHDI
Sbjct: 340 DKLPWYRGKEWSYLRGGLTTVDRDYGWINNIHHDI 374



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 35/54 (64%), Positives = 40/54 (74%)
 Frame = +1

Query: 1   IVFGLXXXXXXXXXXXXWPLYWIAQGTMFWAIFVLGHDCGHGSFSNDSKLNSVV 162
           +VFGL            WPLYW +QGTMFWA+FVLGHDCGHGSFS++ KLNSVV
Sbjct: 138 VVFGLAAIAAFFNNWVVWPLYWFSQGTMFWALFVLGHDCGHGSFSSNPKLNSVV 191


>gb|ABE72960.1| chloroplast omega-3 fatty acid desaturase [Jatropha curcas]
          Length = 455

 Score =  311 bits (797), Expect = 1e-82
 Identities = 134/155 (86%), Positives = 149/155 (96%)
 Frame = +3

Query: 330 VENDESWHPLTEKLFNSLDDVTRKFRFTLPFTMLAYPFYLWGRSPGKKGSHYNPNSDLFV 509
           VENDESWHPL+EK+F SLD++T+  RFTLPF +LAYPFYLWGRSPGKKGSH++P+SDLFV
Sbjct: 220 VENDESWHPLSEKIFKSLDNLTKMLRFTLPFPLLAYPFYLWGRSPGKKGSHFHPDSDLFV 279

Query: 510 PNERKDVITSTVCWTAMAALLVGLNFVLGPLQMLKLYGIPYWIFVMWLDFVTYLHHHGHD 689
           PNERKD+ITST CW+AMAALLVGLNF+LGP+QMLKLYGIPYWIFVMWLD VTYLHHHGH+
Sbjct: 280 PNERKDIITSTACWSAMAALLVGLNFILGPIQMLKLYGIPYWIFVMWLDLVTYLHHHGHE 339

Query: 690 DKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDI 794
           DKLPWYRGKEWSYLRGGLTT+DRDYGWINNIHHDI
Sbjct: 340 DKLPWYRGKEWSYLRGGLTTVDRDYGWINNIHHDI 374



 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 35/53 (66%), Positives = 39/53 (73%)
 Frame = +1

Query: 4   VFGLXXXXXXXXXXXXWPLYWIAQGTMFWAIFVLGHDCGHGSFSNDSKLNSVV 162
           VFGL            WPLYW +QGTMFWA+FVLGHDCGHGSFS++ KLNSVV
Sbjct: 139 VFGLAAIAAFFNNWVVWPLYWFSQGTMFWALFVLGHDCGHGSFSSNPKLNSVV 191


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