BLASTX nr result

ID: Bupleurum21_contig00001336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001336
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283711.2| PREDICTED: E3 ubiquitin-protein ligase UPL2-...   223   1e-56
emb|CBI19293.3| unnamed protein product [Vitis vinifera]              223   1e-56
ref|XP_002527362.1| E3 ubiquitin protein ligase upl2, putative [...   211   4e-53
ref|XP_003527888.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   199   2e-49
ref|XP_003518270.1| PREDICTED: E3 ubiquitin-protein ligase UPL2-...   192   2e-47

>ref|XP_002283711.2| PREDICTED: E3 ubiquitin-protein ligase UPL2-like [Vitis vinifera]
          Length = 3750

 Score =  223 bits (569), Expect = 1e-56
 Identities = 116/157 (73%), Positives = 131/157 (83%), Gaps = 2/157 (1%)
 Frame = +1

Query: 1    DGAPLVGTEDLKAMIRLLRVVQPLYKGQLQRLLLNLCAHSETRTALVKILMEMLMLDMRK 180
            DGAPLV TE LKAMIRLLRVVQPLYKGQLQRLLLNLCAHSETR ALVK+LM+MLMLD RK
Sbjct: 2829 DGAPLVDTEALKAMIRLLRVVQPLYKGQLQRLLLNLCAHSETRIALVKLLMDMLMLDTRK 2888

Query: 181  PSNLLG-SEPSYRLYACQSHVMYSRPQCFNGVPPLVSRRVLETLAFLARSHPLVAKLFFQ 357
            P+N L  SEPSYRLYACQSHVMYSRPQ F+GVPPLVSRR+LET+ +LAR+HP VAK+  Q
Sbjct: 2889 PANHLNTSEPSYRLYACQSHVMYSRPQYFDGVPPLVSRRILETMTYLARNHPYVAKILLQ 2948

Query: 358  FSLP-PSVIESSGLDMTRGKAVMVIDEDEKGQLQHQE 465
            + LP P + E   LD  RGKAVMVI+++   +  HQE
Sbjct: 2949 YRLPHPPLQEPENLDQVRGKAVMVIEDEVVDKKLHQE 2985


>emb|CBI19293.3| unnamed protein product [Vitis vinifera]
          Length = 1824

 Score =  223 bits (569), Expect = 1e-56
 Identities = 116/157 (73%), Positives = 131/157 (83%), Gaps = 2/157 (1%)
 Frame = +1

Query: 1    DGAPLVGTEDLKAMIRLLRVVQPLYKGQLQRLLLNLCAHSETRTALVKILMEMLMLDMRK 180
            DGAPLV TE LKAMIRLLRVVQPLYKGQLQRLLLNLCAHSETR ALVK+LM+MLMLD RK
Sbjct: 949  DGAPLVDTEALKAMIRLLRVVQPLYKGQLQRLLLNLCAHSETRIALVKLLMDMLMLDTRK 1008

Query: 181  PSNLLG-SEPSYRLYACQSHVMYSRPQCFNGVPPLVSRRVLETLAFLARSHPLVAKLFFQ 357
            P+N L  SEPSYRLYACQSHVMYSRPQ F+GVPPLVSRR+LET+ +LAR+HP VAK+  Q
Sbjct: 1009 PANHLNTSEPSYRLYACQSHVMYSRPQYFDGVPPLVSRRILETMTYLARNHPYVAKILLQ 1068

Query: 358  FSLP-PSVIESSGLDMTRGKAVMVIDEDEKGQLQHQE 465
            + LP P + E   LD  RGKAVMVI+++   +  HQE
Sbjct: 1069 YRLPHPPLQEPENLDQVRGKAVMVIEDEVVDKKLHQE 1105


>ref|XP_002527362.1| E3 ubiquitin protein ligase upl2, putative [Ricinus communis]
            gi|223533281|gb|EEF35034.1| E3 ubiquitin protein ligase
            upl2, putative [Ricinus communis]
          Length = 3666

 Score =  211 bits (538), Expect = 4e-53
 Identities = 107/157 (68%), Positives = 129/157 (82%), Gaps = 2/157 (1%)
 Frame = +1

Query: 1    DGAPLVGTEDLKAMIRLLRVVQPLYKGQLQRLLLNLCAHSETRTALVKILMEMLMLDMRK 180
            DGAPLV TE LKAMIR+LR+VQPLYKG LQ+LLLNLCAH ETRT+LVKILM+MLMLD RK
Sbjct: 2748 DGAPLVETESLKAMIRVLRIVQPLYKGPLQKLLLNLCAHGETRTSLVKILMDMLMLDTRK 2807

Query: 181  PSNLL-GSEPSYRLYACQSHVMYSRPQCFNGVPPLVSRRVLETLAFLARSHPLVAKLFFQ 357
            P+N L  +EPSYRLYACQS+VMYSRPQ F+GVPPLVSRR+LETL +LAR+HP VA++  Q
Sbjct: 2808 PANYLNAAEPSYRLYACQSNVMYSRPQTFDGVPPLVSRRILETLTYLARNHPYVARILLQ 2867

Query: 358  FSLP-PSVIESSGLDMTRGKAVMVIDEDEKGQLQHQE 465
              LP P++ ++   D  RGKAVMV++E +     H+E
Sbjct: 2868 SRLPLPALQQAENSDKLRGKAVMVVEEFQDNPKHHEE 2904


>ref|XP_003527888.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3654

 Score =  199 bits (506), Expect = 2e-49
 Identities = 101/148 (68%), Positives = 121/148 (81%), Gaps = 2/148 (1%)
 Frame = +1

Query: 1    DGAPLVGTEDLKAMIRLLRVVQPLYKGQLQRLLLNLCAHSETRTALVKILMEMLMLDMRK 180
            DGAPLV TE L AMIRL RVVQPLYKGQLQRLLLNLCAHSETR +LVKILM++LMLD+RK
Sbjct: 2749 DGAPLVDTEALHAMIRLFRVVQPLYKGQLQRLLLNLCAHSETRISLVKILMDLLMLDVRK 2808

Query: 181  PSNLLGS-EPSYRLYACQSHVMYSRPQCFNGVPPLVSRRVLETLAFLARSHPLVAKLFFQ 357
            P++   + EP YRLY CQS+VMYSRPQ F+GVPPL+SRR+LETL +LAR HP VAK+  Q
Sbjct: 2809 PASYFSAVEPPYRLYGCQSNVMYSRPQSFDGVPPLLSRRILETLTYLARHHPFVAKILLQ 2868

Query: 358  FSL-PPSVIESSGLDMTRGKAVMVIDED 438
            F L PP++ E     +  GKAVMV++++
Sbjct: 2869 FRLHPPALREPDNAGVAPGKAVMVVEDE 2896


>ref|XP_003518270.1| PREDICTED: E3 ubiquitin-protein ligase UPL2-like [Glycine max]
          Length = 3659

 Score =  192 bits (488), Expect = 2e-47
 Identities = 100/147 (68%), Positives = 119/147 (80%), Gaps = 1/147 (0%)
 Frame = +1

Query: 1    DGAPLVGTEDLKAMIRLLRVVQPLYKGQLQRLLLNLCAHSETRTALVKILMEMLMLDMRK 180
            DGAPLV TE L AMIRLLRVVQPLYKGQLQRLLLNLCAHSETRT+LVKILM++LMLD+++
Sbjct: 2753 DGAPLVDTEALHAMIRLLRVVQPLYKGQLQRLLLNLCAHSETRTSLVKILMDLLMLDVKR 2812

Query: 181  PSNLLGS-EPSYRLYACQSHVMYSRPQCFNGVPPLVSRRVLETLAFLARSHPLVAKLFFQ 357
            P +     EP YRLY CQS+VMYSRPQ F+GVPPL+SRR+LETL +LAR+H  VAK+  Q
Sbjct: 2813 PVSYFSKVEPPYRLYGCQSNVMYSRPQSFDGVPPLLSRRILETLTYLARNHLYVAKILLQ 2872

Query: 358  FSLPPSVIESSGLDMTRGKAVMVIDED 438
              LP   I+    D  RGKAVMV++++
Sbjct: 2873 CWLPNPAIKEP--DDARGKAVMVVEDE 2897


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