BLASTX nr result

ID: Bupleurum21_contig00001325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001325
         (1202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320625.1| predicted protein [Populus trichocarpa] gi|2...   645   0.0  
gb|ABC01911.1| succinyl CoA ligase beta subunit-like protein [So...   638   0.0  
ref|XP_002275953.1| PREDICTED: succinyl-CoA ligase [ADP-forming]...   638   0.0  
ref|XP_003542431.1| PREDICTED: succinyl-CoA ligase [ADP-forming]...   634   e-179
ref|XP_002301863.1| predicted protein [Populus trichocarpa] gi|2...   632   e-179

>ref|XP_002320625.1| predicted protein [Populus trichocarpa] gi|222861398|gb|EEE98940.1|
            predicted protein [Populus trichocarpa]
          Length = 421

 Score =  645 bits (1665), Expect = 0.0
 Identities = 317/361 (87%), Positives = 344/361 (95%)
 Frame = +1

Query: 118  VRGLLNNLASRSLSVAGKWQQQQLRRLNIHEYQGAELMGKHGINVPKGAAASSIEEVRKV 297
            +RGLLN L S SLSVAGKWQ QQLRRLNIHEYQGAELMGK+G+NVPKG A SS++EV+K 
Sbjct: 1    MRGLLNKLVSCSLSVAGKWQHQQLRRLNIHEYQGAELMGKYGVNVPKGVAVSSLDEVKKA 60

Query: 298  IKDVFPNESELVVKSQILAGGRGLGTFKNGFQGGVHIVKADKVEETAGKMLGQTLVTKQT 477
            I+DVFP ESELVVKSQ+LAGGRGLG FKNGFQGGVHIVKADK+EETAGKMLGQ LVTKQT
Sbjct: 61   IQDVFPGESELVVKSQVLAGGRGLGKFKNGFQGGVHIVKADKIEETAGKMLGQILVTKQT 120

Query: 478  GPQGKVVNKIYLCEKFSLVNEMYFAIMLDRTTAGPLIIACQKGGTSIEDLAEKFPDMIIK 657
            G QGK+V+K+YLCEK SLVNEMYFAIMLDRT+AGPLIIAC+KGGTSIEDLAEKFPD+IIK
Sbjct: 121  GSQGKIVSKVYLCEKLSLVNEMYFAIMLDRTSAGPLIIACKKGGTSIEDLAEKFPDLIIK 180

Query: 658  VPIDVFKGITDEDAAKVVDGLAPKVSDKKESMEQVKKLYKLFCDCDCTMLEINPLAETSD 837
            VPIDVFKGITDEDAAKVVDGLAPKV+D+  S+EQVKKLYKLFC+CDCT+LEINP+AETSD
Sbjct: 181  VPIDVFKGITDEDAAKVVDGLAPKVADRNNSIEQVKKLYKLFCECDCTLLEINPIAETSD 240

Query: 838  NKMVAADAKLNFDDNAYFRQKEIFALRDPSQEDPREVAAAKADLNYIGLDGQIGCMVNGA 1017
             ++VAADAKLNFDDNA FRQKEIFALRDP+QEDPREVAAA ADLNYIGLDG+IGCMVNGA
Sbjct: 241  KQLVAADAKLNFDDNAAFRQKEIFALRDPTQEDPREVAAAMADLNYIGLDGEIGCMVNGA 300

Query: 1018 GLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTADDKVKAILVNIFGGIMKCD 1197
            GLAMATMDI+KLHGGTPANFLDVGGNASEGQVVEAFKILT+DDKVKAILVNIFGGIMKCD
Sbjct: 301  GLAMATMDIVKLHGGTPANFLDVGGNASEGQVVEAFKILTSDDKVKAILVNIFGGIMKCD 360

Query: 1198 V 1200
            V
Sbjct: 361  V 361


>gb|ABC01911.1| succinyl CoA ligase beta subunit-like protein [Solanum tuberosum]
          Length = 421

 Score =  638 bits (1646), Expect = 0.0
 Identities = 315/362 (87%), Positives = 345/362 (95%)
 Frame = +1

Query: 115  MVRGLLNNLASRSLSVAGKWQQQQLRRLNIHEYQGAELMGKHGINVPKGAAASSIEEVRK 294
            MVRG+L  LA++SLSVAGKWQQQQLRRLNIHEYQGAELMGK+GINVPKG A +S++EV+K
Sbjct: 1    MVRGMLRKLANQSLSVAGKWQQQQLRRLNIHEYQGAELMGKYGINVPKGVAVASLDEVKK 60

Query: 295  VIKDVFPNESELVVKSQILAGGRGLGTFKNGFQGGVHIVKADKVEETAGKMLGQTLVTKQ 474
             I+DVFPN+SE+VVKSQ+LAGGRGLGTFKNGFQGGVHIVKAD+ EE A KMLGQ LVTKQ
Sbjct: 61   AIQDVFPNQSEVVVKSQVLAGGRGLGTFKNGFQGGVHIVKADQAEEIASKMLGQILVTKQ 120

Query: 475  TGPQGKVVNKIYLCEKFSLVNEMYFAIMLDRTTAGPLIIACQKGGTSIEDLAEKFPDMII 654
            TG QGKVV+K+YLCEK SLVNEMYF+I+LDR TAGPLIIAC+KGGTSIEDLAEKFPDMII
Sbjct: 121  TGAQGKVVSKVYLCEKMSLVNEMYFSIILDRATAGPLIIACRKGGTSIEDLAEKFPDMII 180

Query: 655  KVPIDVFKGITDEDAAKVVDGLAPKVSDKKESMEQVKKLYKLFCDCDCTMLEINPLAETS 834
            KVPIDVFKGI+DEDAAKVVDGLAPKV+D+ +S+EQVKKLY LFC+ DCTMLEINPLAETS
Sbjct: 181  KVPIDVFKGISDEDAAKVVDGLAPKVADRNDSIEQVKKLYNLFCETDCTMLEINPLAETS 240

Query: 835  DNKMVAADAKLNFDDNAYFRQKEIFALRDPSQEDPREVAAAKADLNYIGLDGQIGCMVNG 1014
            DNK+VAADAKLNFDDNA +RQKEIF+LRD SQEDPREVAAAKADLNYIGLDG+IGCMVNG
Sbjct: 241  DNKLVAADAKLNFDDNAAYRQKEIFSLRDSSQEDPREVAAAKADLNYIGLDGEIGCMVNG 300

Query: 1015 AGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTADDKVKAILVNIFGGIMKC 1194
            AGLAMATMDIIKLHGGTPANFLDVGGNA+EGQVVEAFKILTAD+KVKAILVNIFGGIMKC
Sbjct: 301  AGLAMATMDIIKLHGGTPANFLDVGGNATEGQVVEAFKILTADEKVKAILVNIFGGIMKC 360

Query: 1195 DV 1200
            DV
Sbjct: 361  DV 362


>ref|XP_002275953.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
            mitochondrial [Vitis vinifera]
            gi|147782941|emb|CAN72294.1| hypothetical protein
            VITISV_037293 [Vitis vinifera]
            gi|297744178|emb|CBI37148.3| unnamed protein product
            [Vitis vinifera]
          Length = 423

 Score =  638 bits (1645), Expect = 0.0
 Identities = 315/362 (87%), Positives = 342/362 (94%)
 Frame = +1

Query: 115  MVRGLLNNLASRSLSVAGKWQQQQLRRLNIHEYQGAELMGKHGINVPKGAAASSIEEVRK 294
            MVRGL+N L SRSL+VAGKWQQQQLRRLNIHEYQGAELM K+GINVPKG A  SIEEVRK
Sbjct: 1    MVRGLVNKLVSRSLNVAGKWQQQQLRRLNIHEYQGAELMSKYGINVPKGVAVGSIEEVRK 60

Query: 295  VIKDVFPNESELVVKSQILAGGRGLGTFKNGFQGGVHIVKADKVEETAGKMLGQTLVTKQ 474
             I+DVFP E+ELVVKSQILAGGRGLGTFK+G +GGVHIVK D+VEE AGKMLGQ LVTKQ
Sbjct: 61   TIQDVFPKENELVVKSQILAGGRGLGTFKSGLKGGVHIVKTDQVEELAGKMLGQILVTKQ 120

Query: 475  TGPQGKVVNKIYLCEKFSLVNEMYFAIMLDRTTAGPLIIACQKGGTSIEDLAEKFPDMII 654
            TGPQGKVV+K+YLCEK SLVNEMYFAI LDR++AGP+IIAC+KGGTSIEDLAEKFPDMI+
Sbjct: 121  TGPQGKVVSKVYLCEKMSLVNEMYFAITLDRSSAGPIIIACRKGGTSIEDLAEKFPDMIV 180

Query: 655  KVPIDVFKGITDEDAAKVVDGLAPKVSDKKESMEQVKKLYKLFCDCDCTMLEINPLAETS 834
            KVPIDVF+GITDEDAAKVVDGLAPKV+D+  S+EQVKKLYKLFC+CDCT+LEINP+AETS
Sbjct: 181  KVPIDVFQGITDEDAAKVVDGLAPKVADRNASIEQVKKLYKLFCECDCTLLEINPIAETS 240

Query: 835  DNKMVAADAKLNFDDNAYFRQKEIFALRDPSQEDPREVAAAKADLNYIGLDGQIGCMVNG 1014
            DN++VAADAKLNFDDNA FRQK IFALRD +QEDPREVAAAKADLNYIGLDG+IGCMVNG
Sbjct: 241  DNQLVAADAKLNFDDNAAFRQKHIFALRDATQEDPREVAAAKADLNYIGLDGEIGCMVNG 300

Query: 1015 AGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTADDKVKAILVNIFGGIMKC 1194
            AGLAMATMDIIKLHGGTPANFLDVGGNASE QVVEAFKILTADDKVKAILVNIFGGIMKC
Sbjct: 301  AGLAMATMDIIKLHGGTPANFLDVGGNASESQVVEAFKILTADDKVKAILVNIFGGIMKC 360

Query: 1195 DV 1200
            D+
Sbjct: 361  DI 362


>ref|XP_003542431.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
            mitochondrial-like [Glycine max]
          Length = 422

 Score =  634 bits (1635), Expect = e-179
 Identities = 312/362 (86%), Positives = 340/362 (93%)
 Frame = +1

Query: 115  MVRGLLNNLASRSLSVAGKWQQQQLRRLNIHEYQGAELMGKHGINVPKGAAASSIEEVRK 294
            MVRGLLN L SRSLSVAGKWQ  QLRRLNIHEYQGAELM KHG+NVP+G A SS+EEVRK
Sbjct: 1    MVRGLLNKLVSRSLSVAGKWQHNQLRRLNIHEYQGAELMSKHGVNVPRGVAVSSVEEVRK 60

Query: 295  VIKDVFPNESELVVKSQILAGGRGLGTFKNGFQGGVHIVKADKVEETAGKMLGQTLVTKQ 474
             IKD+FPNE+ELVVKSQILAGGRGLGTFK+G +GGVHIVK D+VE+ AGKMLGQ LVTKQ
Sbjct: 61   AIKDLFPNENELVVKSQILAGGRGLGTFKSGLKGGVHIVKTDQVEDIAGKMLGQILVTKQ 120

Query: 475  TGPQGKVVNKIYLCEKFSLVNEMYFAIMLDRTTAGPLIIACQKGGTSIEDLAEKFPDMII 654
            TGPQGK+V+K+YLCEK SLVNEMYFAI LDRT+AGP+IIAC KGGTSIEDLAEKFPDMII
Sbjct: 121  TGPQGKIVSKVYLCEKLSLVNEMYFAITLDRTSAGPIIIACSKGGTSIEDLAEKFPDMII 180

Query: 655  KVPIDVFKGITDEDAAKVVDGLAPKVSDKKESMEQVKKLYKLFCDCDCTMLEINPLAETS 834
            KVP+DVF+GITDEDAAKVVDGLA KV+D+ +S+EQVK LYKLF DCDCT+LEINP+AET+
Sbjct: 181  KVPVDVFEGITDEDAAKVVDGLALKVADRNKSIEQVKNLYKLFVDCDCTLLEINPIAETA 240

Query: 835  DNKMVAADAKLNFDDNAYFRQKEIFALRDPSQEDPREVAAAKADLNYIGLDGQIGCMVNG 1014
            DN++VAADAKLNFDDNA +RQKEIFALRD +QEDPREV AAKADLNYIGLDG+IGCMVNG
Sbjct: 241  DNQLVAADAKLNFDDNAAYRQKEIFALRDTTQEDPREVTAAKADLNYIGLDGEIGCMVNG 300

Query: 1015 AGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTADDKVKAILVNIFGGIMKC 1194
            AGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTADDKVKAILVNIFGGIMKC
Sbjct: 301  AGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTADDKVKAILVNIFGGIMKC 360

Query: 1195 DV 1200
            DV
Sbjct: 361  DV 362


>ref|XP_002301863.1| predicted protein [Populus trichocarpa] gi|222843589|gb|EEE81136.1|
            predicted protein [Populus trichocarpa]
          Length = 421

 Score =  632 bits (1630), Expect = e-179
 Identities = 313/361 (86%), Positives = 339/361 (93%)
 Frame = +1

Query: 118  VRGLLNNLASRSLSVAGKWQQQQLRRLNIHEYQGAELMGKHGINVPKGAAASSIEEVRKV 297
            +RG LN L SRSLSVAGKWQ QQLRRLNIHEYQGA LMGK+GINVPKG A +S+  V+K 
Sbjct: 1    MRGFLNKLVSRSLSVAGKWQHQQLRRLNIHEYQGAGLMGKYGINVPKGVAVASLHHVQKA 60

Query: 298  IKDVFPNESELVVKSQILAGGRGLGTFKNGFQGGVHIVKADKVEETAGKMLGQTLVTKQT 477
            ++ VFP+ESELVVKSQ+LAGGRGLG FKNGFQGGVHIVK DKVEETAGKMLGQ LVTKQT
Sbjct: 61   LQYVFPSESELVVKSQVLAGGRGLGKFKNGFQGGVHIVKTDKVEETAGKMLGQILVTKQT 120

Query: 478  GPQGKVVNKIYLCEKFSLVNEMYFAIMLDRTTAGPLIIACQKGGTSIEDLAEKFPDMIIK 657
            G QGK+V+K+YLCEK SLVNEMYFAIMLDRTTAGPLIIAC+KGGTSIEDLAEKFPD+IIK
Sbjct: 121  GSQGKIVSKVYLCEKLSLVNEMYFAIMLDRTTAGPLIIACKKGGTSIEDLAEKFPDLIIK 180

Query: 658  VPIDVFKGITDEDAAKVVDGLAPKVSDKKESMEQVKKLYKLFCDCDCTMLEINPLAETSD 837
            VPIDVFKGITDEDA KVVDGLAPKV+D+ +S+EQVKKLYKLFC+ DCT+LEINP+AETSD
Sbjct: 181  VPIDVFKGITDEDAVKVVDGLAPKVADRNDSIEQVKKLYKLFCESDCTLLEINPIAETSD 240

Query: 838  NKMVAADAKLNFDDNAYFRQKEIFALRDPSQEDPREVAAAKADLNYIGLDGQIGCMVNGA 1017
             ++VAADAKLNFDDNA FRQKEIFALRDP+QEDPREVAAAKADLNYIGLDG+IGCMVNGA
Sbjct: 241  KQLVAADAKLNFDDNAAFRQKEIFALRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGA 300

Query: 1018 GLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTADDKVKAILVNIFGGIMKCD 1197
            GLAMATMDIIKLHGGTPANFLDVGGNASE QVVEAFKILT+DDKVKAILVNIFGGIMKCD
Sbjct: 301  GLAMATMDIIKLHGGTPANFLDVGGNASEEQVVEAFKILTSDDKVKAILVNIFGGIMKCD 360

Query: 1198 V 1200
            V
Sbjct: 361  V 361


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