BLASTX nr result

ID: Bupleurum21_contig00001316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001316
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283650.1| PREDICTED: 30S ribosomal protein S9, chlorop...   224   1e-56
ref|XP_004147796.1| PREDICTED: 30S ribosomal protein S9, chlorop...   223   2e-56
ref|XP_002326903.1| predicted protein [Populus trichocarpa] gi|1...   218   6e-55
ref|XP_002510328.1| ribosomal protein S9, putative [Ricinus comm...   218   8e-55
ref|XP_003544434.1| PREDICTED: 30S ribosomal protein S9, chlorop...   218   1e-54

>ref|XP_002283650.1| PREDICTED: 30S ribosomal protein S9, chloroplastic [Vitis vinifera]
           gi|147855629|emb|CAN79164.1| hypothetical protein
           VITISV_019246 [Vitis vinifera]
           gi|302142422|emb|CBI19625.3| unnamed protein product
           [Vitis vinifera]
          Length = 209

 Score =  224 bits (570), Expect = 1e-56
 Identities = 115/135 (85%), Positives = 119/135 (88%)
 Frame = -1

Query: 653 LPGGFAAQTIFGTGRRKSAIARVVLKEGTGKVIINYRDAKEYLQGNPLWIQYVNFPLLTL 474
           LPGGFAAQTI GTGRRK AIARVVL+EGTGKVIINYRDAKEYLQGNPLW+QYV  PL+TL
Sbjct: 75  LPGGFAAQTIIGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTL 134

Query: 473 GYESSYDVFVKAHGGGLSGQAQAISLGIARALLKVSEDHRTPLRKEGLLTRDARVVEXXX 294
           GYESSYDVFVKAHGGGLSGQAQAISLGIARALLKVSEDHR PLRKEGLLTRD+RVVE   
Sbjct: 135 GYESSYDVFVKAHGGGLSGQAQAISLGIARALLKVSEDHRGPLRKEGLLTRDSRVVERKK 194

Query: 293 XXXXXXXXAPQFSKR 249
                   APQFSKR
Sbjct: 195 VGLKKARKAPQFSKR 209


>ref|XP_004147796.1| PREDICTED: 30S ribosomal protein S9, chloroplastic-like [Cucumis
           sativus] gi|449532978|ref|XP_004173454.1| PREDICTED: 30S
           ribosomal protein S9, chloroplastic-like [Cucumis
           sativus]
          Length = 204

 Score =  223 bits (568), Expect = 2e-56
 Identities = 112/135 (82%), Positives = 121/135 (89%)
 Frame = -1

Query: 653 LPGGFAAQTIFGTGRRKSAIARVVLKEGTGKVIINYRDAKEYLQGNPLWIQYVNFPLLTL 474
           LPGGFAAQT+FGTGRRKSA+ARVVL+EGTGKVIINYR+AKEYLQGNPLW+QYV  PL+TL
Sbjct: 70  LPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYREAKEYLQGNPLWLQYVKIPLVTL 129

Query: 473 GYESSYDVFVKAHGGGLSGQAQAISLGIARALLKVSEDHRTPLRKEGLLTRDARVVEXXX 294
           GYESSYDVFVKA GGGLSGQAQAISLGIARALLKVS+DHR+PL+KEGLLTRDARVVE   
Sbjct: 130 GYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDARVVERKK 189

Query: 293 XXXXXXXXAPQFSKR 249
                   APQFSKR
Sbjct: 190 AGLKKARKAPQFSKR 204


>ref|XP_002326903.1| predicted protein [Populus trichocarpa] gi|118483304|gb|ABK93554.1|
           unknown [Populus trichocarpa]
           gi|222835218|gb|EEE73653.1| predicted protein [Populus
           trichocarpa]
          Length = 210

 Score =  218 bits (556), Expect = 6e-55
 Identities = 109/135 (80%), Positives = 119/135 (88%)
 Frame = -1

Query: 653 LPGGFAAQTIFGTGRRKSAIARVVLKEGTGKVIINYRDAKEYLQGNPLWIQYVNFPLLTL 474
           LPGGFAAQTI GTGRRK AIARVVL+EGTGKVIINYRDAKEYLQGNPLW+QYV  PL+TL
Sbjct: 76  LPGGFAAQTIHGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTL 135

Query: 473 GYESSYDVFVKAHGGGLSGQAQAISLGIARALLKVSEDHRTPLRKEGLLTRDARVVEXXX 294
           GYESSYDVFVKAHGGGL+GQAQAISLG+ARALLKVS+DHR PL++EGLLTRD+R+VE   
Sbjct: 136 GYESSYDVFVKAHGGGLAGQAQAISLGVARALLKVSQDHRIPLKREGLLTRDSRIVERKK 195

Query: 293 XXXXXXXXAPQFSKR 249
                   APQFSKR
Sbjct: 196 VGLKKARKAPQFSKR 210


>ref|XP_002510328.1| ribosomal protein S9, putative [Ricinus communis]
           gi|223551029|gb|EEF52515.1| ribosomal protein S9,
           putative [Ricinus communis]
          Length = 200

 Score =  218 bits (555), Expect = 8e-55
 Identities = 110/135 (81%), Positives = 118/135 (87%)
 Frame = -1

Query: 653 LPGGFAAQTIFGTGRRKSAIARVVLKEGTGKVIINYRDAKEYLQGNPLWIQYVNFPLLTL 474
           LPGGFAAQ IFGTGRRK AIARVVL+EGTGKVIINYRDAKEYLQGNPLW+QYV  PL+TL
Sbjct: 66  LPGGFAAQPIFGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTL 125

Query: 473 GYESSYDVFVKAHGGGLSGQAQAISLGIARALLKVSEDHRTPLRKEGLLTRDARVVEXXX 294
           GYE+SYDVFVKAHGGGLSGQAQAISLG+ARALLKVS+ HR PL+KEGLLTRD+RVVE   
Sbjct: 126 GYENSYDVFVKAHGGGLSGQAQAISLGVARALLKVSDSHRPPLKKEGLLTRDSRVVERKK 185

Query: 293 XXXXXXXXAPQFSKR 249
                   APQFSKR
Sbjct: 186 VGLKKARKAPQFSKR 200


>ref|XP_003544434.1| PREDICTED: 30S ribosomal protein S9, chloroplastic-like [Glycine
           max]
          Length = 207

 Score =  218 bits (554), Expect = 1e-54
 Identities = 110/135 (81%), Positives = 118/135 (87%)
 Frame = -1

Query: 653 LPGGFAAQTIFGTGRRKSAIARVVLKEGTGKVIINYRDAKEYLQGNPLWIQYVNFPLLTL 474
           LPGGFAAQTI GTGRRKSAIARVVL+EGTGK IINYRDAKEYLQGNPLW+QY+  PL+TL
Sbjct: 73  LPGGFAAQTIIGTGRRKSAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLITL 132

Query: 473 GYESSYDVFVKAHGGGLSGQAQAISLGIARALLKVSEDHRTPLRKEGLLTRDARVVEXXX 294
           GYES+YDVFVKA GGGLSGQAQAISLGIARALLKVSEDHR PLR+EGLLTRD+RVVE   
Sbjct: 133 GYESNYDVFVKAEGGGLSGQAQAISLGIARALLKVSEDHRAPLRQEGLLTRDSRVVERKK 192

Query: 293 XXXXXXXXAPQFSKR 249
                   APQ+SKR
Sbjct: 193 VGLKKARKAPQYSKR 207


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