BLASTX nr result

ID: Bupleurum21_contig00001293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001293
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001239641.1| uncharacterized protein LOC100806917 [Glycin...   225   3e-57
gb|AFK37420.1| unknown [Lotus japonicus]                              223   1e-56
gb|AFK46510.1| unknown [Medicago truncatula]                          223   1e-56
ref|XP_003624512.1| Ubiquinol-cytochrome c reductase iron-sulfur...   223   1e-56
ref|XP_003518138.1| PREDICTED: cytochrome b-c1 complex subunit R...   219   1e-55

>ref|NP_001239641.1| uncharacterized protein LOC100806917 [Glycine max]
           gi|255642305|gb|ACU21417.1| unknown [Glycine max]
          Length = 264

 Score =  225 bits (573), Expect = 3e-57
 Identities = 113/134 (84%), Positives = 121/134 (90%)
 Frame = -1

Query: 402 RGFAVDVALPKDVNSLIPEIPATVTAVKNPSANIIYDSSNHERFPPGDPSKRAAAYFVLT 223
           RGFA +  +    NS+IPEIPATVTAVKNP++ I+YD  NHERFPPGDPSKRA AYFVLT
Sbjct: 50  RGFATESLIHPIENSIIPEIPATVTAVKNPTSKIVYDEHNHERFPPGDPSKRAFAYFVLT 109

Query: 222 GGRFVYASLIRLLVLKFVISMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRR 43
           GGRF YASL+RLLVLKFV+SMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRR
Sbjct: 110 GGRFAYASLVRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRR 169

Query: 42  TEDDIALANSVDVG 1
           TEDDI LANSVDVG
Sbjct: 170 TEDDIKLANSVDVG 183


>gb|AFK37420.1| unknown [Lotus japonicus]
          Length = 273

 Score =  223 bits (569), Expect = 1e-56
 Identities = 114/134 (85%), Positives = 119/134 (88%)
 Frame = -1

Query: 402 RGFAVDVALPKDVNSLIPEIPATVTAVKNPSANIIYDSSNHERFPPGDPSKRAAAYFVLT 223
           RGFA +  +    NSLIPEIPATV AVKNPS+ I+YD  NHERFPPGDPSKRA  YFVLT
Sbjct: 59  RGFATESLVHTKENSLIPEIPATVAAVKNPSSKIVYDDHNHERFPPGDPSKRAFTYFVLT 118

Query: 222 GGRFVYASLIRLLVLKFVISMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRR 43
           GGRFVYASLIRLLVLKFV+SMSASKDVLALASLEVDLSSIEPGT VTVKWRGKPVFIRRR
Sbjct: 119 GGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTIVTVKWRGKPVFIRRR 178

Query: 42  TEDDIALANSVDVG 1
           TEDDI LANSVDVG
Sbjct: 179 TEDDIKLANSVDVG 192


>gb|AFK46510.1| unknown [Medicago truncatula]
          Length = 273

 Score =  223 bits (568), Expect = 1e-56
 Identities = 111/134 (82%), Positives = 121/134 (90%)
 Frame = -1

Query: 402 RGFAVDVALPKDVNSLIPEIPATVTAVKNPSANIIYDSSNHERFPPGDPSKRAAAYFVLT 223
           RGFA +  +    NS+IPEIPATV+AVKNPS+ I+YD  NHERFPPGDPSKRA AYFVLT
Sbjct: 59  RGFATESLIHTKENSIIPEIPATVSAVKNPSSKIVYDEYNHERFPPGDPSKRAFAYFVLT 118

Query: 222 GGRFVYASLIRLLVLKFVISMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRR 43
           GGRF YASLIRLLVLKFV+SMSASKDVLA+ASLEVDLSSIEPGTTVTVKWRGKPVFIRRR
Sbjct: 119 GGRFAYASLIRLLVLKFVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRR 178

Query: 42  TEDDIALANSVDVG 1
           T+DD+ LANSVDVG
Sbjct: 179 TDDDVKLANSVDVG 192


>ref|XP_003624512.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Medicago
           truncatula] gi|355499527|gb|AES80730.1|
           Ubiquinol-cytochrome c reductase iron-sulfur subunit
           [Medicago truncatula]
          Length = 273

 Score =  223 bits (568), Expect = 1e-56
 Identities = 111/134 (82%), Positives = 121/134 (90%)
 Frame = -1

Query: 402 RGFAVDVALPKDVNSLIPEIPATVTAVKNPSANIIYDSSNHERFPPGDPSKRAAAYFVLT 223
           RGFA +  +    NS+IPEIPATV+AVKNPS+ I+YD  NHERFPPGDPSKRA AYFVLT
Sbjct: 59  RGFATESLIHTKENSIIPEIPATVSAVKNPSSKIVYDEYNHERFPPGDPSKRAFAYFVLT 118

Query: 222 GGRFVYASLIRLLVLKFVISMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRR 43
           GGRF YASLIRLLVLKFV+SMSASKDVLA+ASLEVDLSSIEPGTTVTVKWRGKPVFIRRR
Sbjct: 119 GGRFAYASLIRLLVLKFVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRR 178

Query: 42  TEDDIALANSVDVG 1
           T+DD+ LANSVDVG
Sbjct: 179 TDDDVKLANSVDVG 192


>ref|XP_003518138.1| PREDICTED: cytochrome b-c1 complex subunit Rieske-2,
           mitochondrial-like [Glycine max]
          Length = 266

 Score =  219 bits (559), Expect = 1e-55
 Identities = 109/134 (81%), Positives = 119/134 (88%)
 Frame = -1

Query: 402 RGFAVDVALPKDVNSLIPEIPATVTAVKNPSANIIYDSSNHERFPPGDPSKRAAAYFVLT 223
           RG+A +  +    NS+ PEIP TVTAVKNP++ I+YD  NHERFPPGDPSKRA AYFVLT
Sbjct: 52  RGYATESLIHTKENSITPEIPPTVTAVKNPTSKIVYDDHNHERFPPGDPSKRAFAYFVLT 111

Query: 222 GGRFVYASLIRLLVLKFVISMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRR 43
           GGRF YAS++RLLVLKFV+SMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRR
Sbjct: 112 GGRFAYASVVRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRR 171

Query: 42  TEDDIALANSVDVG 1
           TEDDI LANSVDVG
Sbjct: 172 TEDDIKLANSVDVG 185


Top