BLASTX nr result

ID: Bupleurum21_contig00001275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001275
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002873569.1| THUMP domain-containing protein [Arabidopsis...   287   1e-75
ref|NP_568274.1| THUMP domain-containing protein [Arabidopsis th...   282   3e-74
ref|XP_002278600.1| PREDICTED: uncharacterized protein LOC100244...   281   4e-74
ref|XP_002513537.1| thump domain protein, putative [Ricinus comm...   281   7e-74
ref|XP_003517517.1| PREDICTED: uncharacterized protein LOC100776...   276   2e-72

>ref|XP_002873569.1| THUMP domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319406|gb|EFH49828.1| THUMP domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 362

 Score =  287 bits (734), Expect = 1e-75
 Identities = 138/178 (77%), Positives = 161/178 (90%)
 Frame = -2

Query: 580 SVDRLIEAELEELKDKSKKRFIFLDSGCNGVVFVQMLRKDGDPSPKDIAQHMIESVASTK 401
           S+D+LIEAEL+EL DKSK+RF+ LD GCNG+VF+QM R+DGDPSPKDIAQH + S A+TK
Sbjct: 185 SIDKLIEAELKELGDKSKRRFMKLDPGCNGLVFIQMKRRDGDPSPKDIAQHAMTSAAATK 244

Query: 400 KHMSRFLLRVLPIEVSCYASEEEISRAIKPLIEQHFPAETETTHKFAVLYEARANTGVDR 221
           KHMSRF+LR+LPIEVSCY SEEEISRAIKPL+EQ+FP ETE   KFAVLY ARANTG+DR
Sbjct: 245 KHMSRFILRLLPIEVSCYPSEEEISRAIKPLVEQYFPIETENPRKFAVLYGARANTGLDR 304

Query: 220 MKIINAVAKSVPQPHKVDLNNPDKNIVVQIAKTVCLIGVVEKYKELAKYNLRQLTSSN 47
           MKIIN +AKS+P PHKVDL+NP+ +IVV++ KTVCLIGVVEKYKELAKYNLRQLTS+N
Sbjct: 305 MKIINTIAKSIPAPHKVDLSNPEMSIVVEVVKTVCLIGVVEKYKELAKYNLRQLTSTN 362


>ref|NP_568274.1| THUMP domain-containing protein [Arabidopsis thaliana]
           gi|14586371|emb|CAC42902.1| putative protein
           [Arabidopsis thaliana] gi|22022558|gb|AAM83236.1|
           At5g12410 [Arabidopsis thaliana]
           gi|24797044|gb|AAN64534.1| At5g12410/At5g12410
           [Arabidopsis thaliana] gi|332004423|gb|AED91806.1| THUMP
           domain-containing protein [Arabidopsis thaliana]
          Length = 376

 Score =  282 bits (722), Expect = 3e-74
 Identities = 136/178 (76%), Positives = 159/178 (89%)
 Frame = -2

Query: 580 SVDRLIEAELEELKDKSKKRFIFLDSGCNGVVFVQMLRKDGDPSPKDIAQHMIESVASTK 401
           S+D+LIEAEL+EL DKSK+RF+ LD GCNG+VF+QM ++DGDPSPK+I QH + S A+TK
Sbjct: 199 SIDKLIEAELKELGDKSKRRFMKLDPGCNGLVFIQMKKRDGDPSPKEIVQHAMTSAAATK 258

Query: 400 KHMSRFLLRVLPIEVSCYASEEEISRAIKPLIEQHFPAETETTHKFAVLYEARANTGVDR 221
           KHMSRF+LR+LPIEVSCY SEEEISRAIKPL+EQ+FP ETE   KFAVLY ARANTG+DR
Sbjct: 259 KHMSRFILRLLPIEVSCYPSEEEISRAIKPLVEQYFPIETENPRKFAVLYGARANTGLDR 318

Query: 220 MKIINAVAKSVPQPHKVDLNNPDKNIVVQIAKTVCLIGVVEKYKELAKYNLRQLTSSN 47
           MKIIN +AKS+P PHKVDL+NP+  IVV+I KTVCLIGVVEKYKELAKYNLRQLTS+N
Sbjct: 319 MKIINTIAKSIPAPHKVDLSNPEMTIVVEIIKTVCLIGVVEKYKELAKYNLRQLTSTN 376


>ref|XP_002278600.1| PREDICTED: uncharacterized protein LOC100244787 [Vitis vinifera]
           gi|297734958|emb|CBI17192.3| unnamed protein product
           [Vitis vinifera]
          Length = 392

 Score =  281 bits (720), Expect = 4e-74
 Identities = 137/176 (77%), Positives = 158/176 (89%)
 Frame = -2

Query: 580 SVDRLIEAELEELKDKSKKRFIFLDSGCNGVVFVQMLRKDGDPSPKDIAQHMIESVASTK 401
           S+D+LIEAEL+EL D++K+RF  LDSGCNGVVFVQM +KDGDPSPK+I QHM+ S AST+
Sbjct: 215 SIDKLIEAELQELGDRNKRRFGNLDSGCNGVVFVQMRKKDGDPSPKEIVQHMMTSAASTR 274

Query: 400 KHMSRFLLRVLPIEVSCYASEEEISRAIKPLIEQHFPAETETTHKFAVLYEARANTGVDR 221
           KHMSRF+LRVLP+E +CYASEEEIS AIKPL+EQ+FP ET+   KFAVLYEAR+NTG+DR
Sbjct: 275 KHMSRFILRVLPVEATCYASEEEISIAIKPLVEQYFPVETQNPKKFAVLYEARSNTGIDR 334

Query: 220 MKIINAVAKSVPQPHKVDLNNPDKNIVVQIAKTVCLIGVVEKYKELAKYNLRQLTS 53
           MKIIN+VAKSVP PHKVDL+NPD  IVVQI KTVCLIG +EKYKELAKYNLRQLTS
Sbjct: 335 MKIINSVAKSVPGPHKVDLSNPDMTIVVQIVKTVCLIGFLEKYKELAKYNLRQLTS 390


>ref|XP_002513537.1| thump domain protein, putative [Ricinus communis]
           gi|223547445|gb|EEF48940.1| thump domain protein,
           putative [Ricinus communis]
          Length = 382

 Score =  281 bits (718), Expect = 7e-74
 Identities = 134/176 (76%), Positives = 159/176 (90%)
 Frame = -2

Query: 580 SVDRLIEAELEELKDKSKKRFIFLDSGCNGVVFVQMLRKDGDPSPKDIAQHMIESVASTK 401
           S+D+LIE EL+EL DKSK+RF  LDSGCNGVVFVQM ++DGDPSPKDIAQH++ S AST+
Sbjct: 205 SIDKLIEDELKELGDKSKRRFTNLDSGCNGVVFVQMRKRDGDPSPKDIAQHIMTSAASTR 264

Query: 400 KHMSRFLLRVLPIEVSCYASEEEISRAIKPLIEQHFPAETETTHKFAVLYEARANTGVDR 221
           KHMSRF+LRVLP+E++CYASEEEIS+A+ P++E++FP +T+   KFAVLYEARANTG+DR
Sbjct: 265 KHMSRFILRVLPVEIACYASEEEISKAMAPIVEKYFPVDTQNPQKFAVLYEARANTGIDR 324

Query: 220 MKIINAVAKSVPQPHKVDLNNPDKNIVVQIAKTVCLIGVVEKYKELAKYNLRQLTS 53
           MKIIN+VAKSVP PHKVDLNNPDK IVV+I KTVCLIG+VE YK LAKYNLRQLTS
Sbjct: 325 MKIINSVAKSVPGPHKVDLNNPDKTIVVEIVKTVCLIGLVENYKGLAKYNLRQLTS 380


>ref|XP_003517517.1| PREDICTED: uncharacterized protein LOC100776466 [Glycine max]
          Length = 384

 Score =  276 bits (706), Expect = 2e-72
 Identities = 135/176 (76%), Positives = 156/176 (88%)
 Frame = -2

Query: 580 SVDRLIEAELEELKDKSKKRFIFLDSGCNGVVFVQMLRKDGDPSPKDIAQHMIESVASTK 401
           S+D+LIE E +EL DK+K+RF+ LDSGCNGVVFVQM +KDGD SPKDI   ++ S AST 
Sbjct: 206 SIDKLIEEEFKELGDKNKRRFVKLDSGCNGVVFVQMRKKDGDRSPKDIVHRIVTSAASTG 265

Query: 400 KHMSRFLLRVLPIEVSCYASEEEISRAIKPLIEQHFPAETETTHKFAVLYEARANTGVDR 221
           KHMSRF+LR+LPIEVSCYAS+EEISR IKPL+EQ+FP ET+   KFAVLYEARANTGVDR
Sbjct: 266 KHMSRFILRILPIEVSCYASKEEISRTIKPLVEQYFPVETQNPLKFAVLYEARANTGVDR 325

Query: 220 MKIINAVAKSVPQPHKVDLNNPDKNIVVQIAKTVCLIGVVEKYKELAKYNLRQLTS 53
           M+II+AVAKSVP PHKVDL NPDK IVV+IA+TVCLIGV+EKYKEL+KYNLRQLTS
Sbjct: 326 MEIIDAVAKSVPGPHKVDLKNPDKTIVVEIARTVCLIGVIEKYKELSKYNLRQLTS 381


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