BLASTX nr result
ID: Bupleurum21_contig00001267
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00001267
(1247 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003213427.1| PREDICTED: transitional endoplasmic reticulu... 285 e-106
ref|XP_002323472.1| predicted protein [Populus trichocarpa] gi|2... 315 1e-83
ref|XP_002326365.1| predicted protein [Populus trichocarpa] gi|2... 315 1e-83
ref|NP_187595.1| cell division control protein 48-A [Arabidopsis... 315 2e-83
pir||T48355 transitional endoplasmic reticulum ATPase - Arabidop... 315 2e-83
>ref|XP_003213427.1| PREDICTED: transitional endoplasmic reticulum ATPase-like, partial
[Meleagris gallopavo]
Length = 674
Score = 285 bits (729), Expect(2) = e-106
Identities = 140/153 (91%), Positives = 149/153 (97%)
Frame = +2
Query: 770 ELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAG 949
ELPLRHP LFK+IGVKPP+GILLYGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAG
Sbjct: 107 ELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAG 166
Query: 950 ESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAH 1129
ESESNLRKAFEEAEKNAP+IIFIDE+D+IAPKREKT+GEVERRIVSQLLTLMDGLK RAH
Sbjct: 167 ESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAH 226
Query: 1130 VIVMGATNRPNSIDPALRRFGRFDREIDIGVPD 1228
VIVM ATNRPNSIDPALRRFGRFDRE+DIG+PD
Sbjct: 227 VIVMAATNRPNSIDPALRRFGRFDREVDIGIPD 259
Score = 129 bits (325), Expect(2) = e-106
Identities = 54/69 (78%), Positives = 65/69 (94%)
Frame = +3
Query: 459 VHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDMFLVRGGMRSV 638
+ C DVKYGKR+H+LP+DDT+EG+TGNLF+ YLKPYFLEAYRP+RKGD+FLVRGGMR+V
Sbjct: 1 IQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAV 60
Query: 639 EFKVIETDP 665
EFKV+ETDP
Sbjct: 61 EFKVVETDP 69
Score = 157 bits (397), Expect = 5e-36
Identities = 76/161 (47%), Positives = 111/161 (68%), Gaps = 3/161 (1%)
Frame = +2
Query: 770 ELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAG 949
+ P+ HP F G+ P KG+L YGPPG GKTL+A+A+ANE A F I GPE+++ G
Sbjct: 362 QYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFG 421
Query: 950 ESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGE---VERRIVSQLLTLMDGLKS 1120
ESE+N+R+ F++A + AP ++F DE+DSIA R G+ R+++Q+LT MDG+ +
Sbjct: 422 ESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMST 481
Query: 1121 RAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 1243
+ +V ++GATNRP+ IDPA+ R GR D+ I I +PDE R+
Sbjct: 482 KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRV 522
>ref|XP_002323472.1| predicted protein [Populus trichocarpa] gi|222868102|gb|EEF05233.1|
predicted protein [Populus trichocarpa]
Length = 802
Score = 315 bits (808), Expect = 1e-83
Identities = 159/159 (100%), Positives = 159/159 (100%)
Frame = +2
Query: 770 ELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAG 949
ELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAG
Sbjct: 225 ELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAG 284
Query: 950 ESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAH 1129
ESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAH
Sbjct: 285 ESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAH 344
Query: 1130 VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 1246
VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE
Sbjct: 345 VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
Score = 259 bits (662), Expect = 1e-66
Identities = 125/130 (96%), Positives = 129/130 (99%)
Frame = +3
Query: 276 LHPDTMEKLQLFRGDTILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVV 455
LHP+TMEKLQLFRGDTILIKGKKRKDTICIALADD+CDEPKIRMNKVVRSNLRVRLGDVV
Sbjct: 46 LHPETMEKLQLFRGDTILIKGKKRKDTICIALADDSCDEPKIRMNKVVRSNLRVRLGDVV 105
Query: 456 SVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDMFLVRGGMRS 635
SVHQC DVKYGKRVHILP+DDTIEGVTGNLFDAYLKPYFLEAYRPVRKGD+FLVRGGMRS
Sbjct: 106 SVHQCPDVKYGKRVHILPIDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRS 165
Query: 636 VEFKVIETDP 665
VEFKVIETDP
Sbjct: 166 VEFKVIETDP 175
Score = 162 bits (409), Expect = 2e-37
Identities = 77/162 (47%), Positives = 115/162 (70%), Gaps = 3/162 (1%)
Frame = +2
Query: 770 ELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAG 949
+ P+ HP+ F+ G+ P KG+L YGPPG GKTL+A+A+ANE A F + GPE+++ G
Sbjct: 498 QYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFG 557
Query: 950 ESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGE---VERRIVSQLLTLMDGLKS 1120
ESE+N+R+ F++A ++AP ++F DE+DSIA +R + G+ R+++QLLT MDG+ +
Sbjct: 558 ESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMTA 617
Query: 1121 RAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 1246
+ V ++GATNRP+ IDPAL R GR D+ I I +PDE R +
Sbjct: 618 KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRFQ 659
>ref|XP_002326365.1| predicted protein [Populus trichocarpa] gi|222833558|gb|EEE72035.1|
predicted protein [Populus trichocarpa]
Length = 810
Score = 315 bits (808), Expect = 1e-83
Identities = 159/159 (100%), Positives = 159/159 (100%)
Frame = +2
Query: 770 ELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAG 949
ELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAG
Sbjct: 227 ELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAG 286
Query: 950 ESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAH 1129
ESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAH
Sbjct: 287 ESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAH 346
Query: 1130 VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 1246
VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE
Sbjct: 347 VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 385
Score = 259 bits (662), Expect = 1e-66
Identities = 125/130 (96%), Positives = 129/130 (99%)
Frame = +3
Query: 276 LHPDTMEKLQLFRGDTILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVV 455
LHP+TMEKLQLFRGDTILIKGKKRKDTICIALADD+CDEPKIRMNKVVRSNLRVRLGDVV
Sbjct: 48 LHPETMEKLQLFRGDTILIKGKKRKDTICIALADDSCDEPKIRMNKVVRSNLRVRLGDVV 107
Query: 456 SVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDMFLVRGGMRS 635
SVHQC DVKYGKRVHILP+DDTIEGVTGNLFDAYLKPYFLEAYRPVRKGD+FLVRGGMRS
Sbjct: 108 SVHQCPDVKYGKRVHILPIDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRS 167
Query: 636 VEFKVIETDP 665
VEFKVIETDP
Sbjct: 168 VEFKVIETDP 177
Score = 162 bits (411), Expect = 1e-37
Identities = 78/162 (48%), Positives = 115/162 (70%), Gaps = 3/162 (1%)
Frame = +2
Query: 770 ELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAG 949
+ P+ HP+ F+ G+ P KG+L YGPPG GKTL+A+A+ANE A F I GPE+++ G
Sbjct: 500 QYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFG 559
Query: 950 ESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGE---VERRIVSQLLTLMDGLKS 1120
ESE+N+R+ F++A ++AP ++F DE+DSIA +R + G+ R+++QLLT MDG+ +
Sbjct: 560 ESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSA 619
Query: 1121 RAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 1246
+ V ++GATNRP+ IDPAL R GR D+ I I +PDE R +
Sbjct: 620 KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRFQ 661
>ref|NP_187595.1| cell division control protein 48-A [Arabidopsis thaliana]
gi|1705677|sp|P54609.1|CD48A_ARATH RecName: Full=Cell
division control protein 48 homolog A; Short=AtCDC48a
gi|6681343|gb|AAF23260.1|AC015985_18 putative
transitional endoplasmic reticulum ATPase [Arabidopsis
thaliana] gi|1019904|gb|AAC49120.1| cell division cycle
protein [Arabidopsis thaliana] gi|17473551|gb|AAL38252.1|
putative transitional endoplasmic reticulum ATPase
[Arabidopsis thaliana] gi|20453130|gb|AAM19807.1|
AT3g09840/F8A24_11 [Arabidopsis thaliana]
gi|110735114|gb|ABG89127.1| CDC48a [synthetic construct]
gi|222424942|dbj|BAH20422.1| AT3G09840 [Arabidopsis
thaliana] gi|332641299|gb|AEE74820.1| cell division
control protein 48-A [Arabidopsis thaliana]
Length = 809
Score = 315 bits (807), Expect = 2e-83
Identities = 158/159 (99%), Positives = 159/159 (100%)
Frame = +2
Query: 770 ELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAG 949
ELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAG
Sbjct: 224 ELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAG 283
Query: 950 ESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAH 1129
ESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAH
Sbjct: 284 ESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAH 343
Query: 1130 VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 1246
VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDE+GRLE
Sbjct: 344 VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLE 382
Score = 255 bits (652), Expect = 1e-65
Identities = 122/130 (93%), Positives = 128/130 (98%)
Frame = +3
Query: 276 LHPDTMEKLQLFRGDTILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVV 455
LHP TMEKLQLFRGDTILIKGKKRKDT+CIALAD+TC+EPKIRMNKVVRSNLRVRLGDV+
Sbjct: 45 LHPATMEKLQLFRGDTILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVI 104
Query: 456 SVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDMFLVRGGMRS 635
SVHQC DVKYGKRVHILPVDDT+EGVTGNLFDAYLKPYFLEAYRPVRKGD+FLVRGGMRS
Sbjct: 105 SVHQCPDVKYGKRVHILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRS 164
Query: 636 VEFKVIETDP 665
VEFKVIETDP
Sbjct: 165 VEFKVIETDP 174
Score = 157 bits (397), Expect = 5e-36
Identities = 77/162 (47%), Positives = 112/162 (69%), Gaps = 4/162 (2%)
Frame = +2
Query: 770 ELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAG 949
+ P+ HP+ F+ G+ P KG+L YGPPG GKTL+A+A+ANE A F + GPE+++ G
Sbjct: 497 QYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFG 556
Query: 950 ESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR----EKTNGEVERRIVSQLLTLMDGLK 1117
ESE+N+R+ F++A ++AP ++F DE+DSIA +R G R+++QLLT MDG+
Sbjct: 557 ESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMN 616
Query: 1118 SRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 1243
++ V ++GATNRP+ ID AL R GR D+ I I +PDE RL
Sbjct: 617 AKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRL 658
>pir||T48355 transitional endoplasmic reticulum ATPase - Arabidopsis thaliana
gi|7378614|emb|CAB83290.1| transitional endoplasmic
reticulum ATPase [Arabidopsis thaliana]
Length = 843
Score = 315 bits (807), Expect = 2e-83
Identities = 158/159 (99%), Positives = 159/159 (100%)
Frame = +2
Query: 770 ELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAG 949
ELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAG
Sbjct: 257 ELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAG 316
Query: 950 ESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAH 1129
ESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAH
Sbjct: 317 ESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAH 376
Query: 1130 VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 1246
VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDE+GRLE
Sbjct: 377 VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLE 415
Score = 256 bits (653), Expect = 1e-65
Identities = 122/130 (93%), Positives = 128/130 (98%)
Frame = +3
Query: 276 LHPDTMEKLQLFRGDTILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVV 455
LHP TMEKLQLFRGDTILIKGKKRKDT+CIALAD+TC+EPKIRMNKVVRSNLRVRLGDV+
Sbjct: 78 LHPTTMEKLQLFRGDTILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVI 137
Query: 456 SVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDMFLVRGGMRS 635
SVHQC DVKYGKRVHILPVDDT+EGVTGNLFDAYLKPYFLEAYRPVRKGD+FLVRGGMRS
Sbjct: 138 SVHQCPDVKYGKRVHILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRS 197
Query: 636 VEFKVIETDP 665
VEFKVIETDP
Sbjct: 198 VEFKVIETDP 207
Score = 160 bits (404), Expect = 8e-37
Identities = 77/161 (47%), Positives = 114/161 (70%), Gaps = 3/161 (1%)
Frame = +2
Query: 770 ELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAG 949
+ P+ HP+ F+ G+ P KG+L YGPPG GKTL+A+A+ANE A F + GPE+++ G
Sbjct: 530 QYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFG 589
Query: 950 ESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGE---VERRIVSQLLTLMDGLKS 1120
ESE+N+R+ F++A ++AP ++F DE+DSIA +R + G+ R+++QLLT MDG+ +
Sbjct: 590 ESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNA 649
Query: 1121 RAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 1243
+ V ++GATNRP+ ID AL R GR D+ I I +PDE RL
Sbjct: 650 KKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRL 690