BLASTX nr result

ID: Bupleurum21_contig00001264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001264
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   236   1e-60
emb|CBI38032.3| unnamed protein product [Vitis vinifera]              236   1e-60
emb|CBI18352.3| unnamed protein product [Vitis vinifera]              234   7e-60
ref|XP_002270644.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   234   7e-60
emb|CAN74342.1| hypothetical protein VITISV_005473 [Vitis vinifera]   234   7e-60

>ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
           vinifera]
          Length = 712

 Score =  236 bits (603), Expect = 1e-60
 Identities = 130/164 (79%), Positives = 144/164 (87%), Gaps = 2/164 (1%)
 Frame = -1

Query: 486 QVVGVLDAIPSSNFKPENE--ELDEKKIYRTTHMFTATMPLPPAVEHLARKYLRNPVVVS 313
           QVVGVLDA+PSSN KPENE  ELDEKKIYRTT+MF+ATMP  PAVE LARKYLRNPVVV+
Sbjct: 462 QVVGVLDAMPSSNLKPENEDEELDEKKIYRTTYMFSATMP--PAVERLARKYLRNPVVVT 519

Query: 312 IGTTGEATTDLITQHVIMVKESEKMRMLQKLLDDLGDKTAIVFLNTKKAAYSVLEGLDKI 133
           IGT G+AT DLITQHVIM+KESEKM  LQKLLD+LGDKTAIVF+NTKK+A ++ +GLDK 
Sbjct: 520 IGTAGKAT-DLITQHVIMMKESEKMFKLQKLLDELGDKTAIVFINTKKSADNLAKGLDKA 578

Query: 132 EYQVTTLHNCMSQEQREISLEGFRNKKYNVLVATDVAVAGRGID 1
            Y+VTTLH   SQEQREISLEGFR K+YNVLVATD  VAGRGID
Sbjct: 579 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATD--VAGRGID 620


>emb|CBI38032.3| unnamed protein product [Vitis vinifera]
          Length = 797

 Score =  236 bits (603), Expect = 1e-60
 Identities = 130/164 (79%), Positives = 144/164 (87%), Gaps = 2/164 (1%)
 Frame = -1

Query: 486 QVVGVLDAIPSSNFKPENE--ELDEKKIYRTTHMFTATMPLPPAVEHLARKYLRNPVVVS 313
           QVVGVLDA+PSSN KPENE  ELDEKKIYRTT+MF+ATMP  PAVE LARKYLRNPVVV+
Sbjct: 476 QVVGVLDAMPSSNLKPENEDEELDEKKIYRTTYMFSATMP--PAVERLARKYLRNPVVVT 533

Query: 312 IGTTGEATTDLITQHVIMVKESEKMRMLQKLLDDLGDKTAIVFLNTKKAAYSVLEGLDKI 133
           IGT G+AT DLITQHVIM+KESEKM  LQKLLD+LGDKTAIVF+NTKK+A ++ +GLDK 
Sbjct: 534 IGTAGKAT-DLITQHVIMMKESEKMFKLQKLLDELGDKTAIVFINTKKSADNLAKGLDKA 592

Query: 132 EYQVTTLHNCMSQEQREISLEGFRNKKYNVLVATDVAVAGRGID 1
            Y+VTTLH   SQEQREISLEGFR K+YNVLVATD  VAGRGID
Sbjct: 593 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATD--VAGRGID 634


>emb|CBI18352.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  234 bits (596), Expect = 7e-60
 Identities = 129/164 (78%), Positives = 142/164 (86%), Gaps = 2/164 (1%)
 Frame = -1

Query: 486 QVVGVLDAIPSSNFKPENE--ELDEKKIYRTTHMFTATMPLPPAVEHLARKYLRNPVVVS 313
           QVVGVLDA+PSSN KPENE  ELDEKKIYRTT+MF+ATMP  PAVE LARKYLRNPVVV+
Sbjct: 380 QVVGVLDAMPSSNLKPENEDEELDEKKIYRTTYMFSATMP--PAVERLARKYLRNPVVVT 437

Query: 312 IGTTGEATTDLITQHVIMVKESEKMRMLQKLLDDLGDKTAIVFLNTKKAAYSVLEGLDKI 133
           IGT G+AT DLITQHVIMVK SEKM  LQKLLD+LGDKTAIVF+NTKK+  ++ +GLDK 
Sbjct: 438 IGTAGKAT-DLITQHVIMVKGSEKMPKLQKLLDELGDKTAIVFINTKKSTDTLAKGLDKA 496

Query: 132 EYQVTTLHNCMSQEQREISLEGFRNKKYNVLVATDVAVAGRGID 1
            Y+VTTLH   SQEQREISLEGFR K+YNVLVATD  VAGRGID
Sbjct: 497 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATD--VAGRGID 538


>ref|XP_002270644.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
           vinifera]
          Length = 709

 Score =  234 bits (596), Expect = 7e-60
 Identities = 129/164 (78%), Positives = 142/164 (86%), Gaps = 2/164 (1%)
 Frame = -1

Query: 486 QVVGVLDAIPSSNFKPENE--ELDEKKIYRTTHMFTATMPLPPAVEHLARKYLRNPVVVS 313
           QVVGVLDA+PSSN KPENE  ELDEKKIYRTT+MF+ATMP  PAVE LARKYLRNPVVV+
Sbjct: 459 QVVGVLDAMPSSNLKPENEDEELDEKKIYRTTYMFSATMP--PAVERLARKYLRNPVVVT 516

Query: 312 IGTTGEATTDLITQHVIMVKESEKMRMLQKLLDDLGDKTAIVFLNTKKAAYSVLEGLDKI 133
           IGT G+AT DLITQHVIMVK SEKM  LQKLLD+LGDKTAIVF+NTKK+  ++ +GLDK 
Sbjct: 517 IGTAGKAT-DLITQHVIMVKGSEKMPKLQKLLDELGDKTAIVFINTKKSTDTLAKGLDKA 575

Query: 132 EYQVTTLHNCMSQEQREISLEGFRNKKYNVLVATDVAVAGRGID 1
            Y+VTTLH   SQEQREISLEGFR K+YNVLVATD  VAGRGID
Sbjct: 576 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATD--VAGRGID 617


>emb|CAN74342.1| hypothetical protein VITISV_005473 [Vitis vinifera]
          Length = 661

 Score =  234 bits (596), Expect = 7e-60
 Identities = 129/164 (78%), Positives = 142/164 (86%), Gaps = 2/164 (1%)
 Frame = -1

Query: 486 QVVGVLDAIPSSNFKPENE--ELDEKKIYRTTHMFTATMPLPPAVEHLARKYLRNPVVVS 313
           QVVGVLDA+PSSN KPENE  ELDEKKIYRTT+MF+ATMP  PAVE LARKYLRNPVVV+
Sbjct: 411 QVVGVLDAMPSSNLKPENEDEELDEKKIYRTTYMFSATMP--PAVERLARKYLRNPVVVT 468

Query: 312 IGTTGEATTDLITQHVIMVKESEKMRMLQKLLDDLGDKTAIVFLNTKKAAYSVLEGLDKI 133
           IGT G+AT DLITQHVIMVK SEKM  LQKLLD+LGDKTAIVF+NTKK+  ++ +GLDK 
Sbjct: 469 IGTAGKAT-DLITQHVIMVKGSEKMPKLQKLLDELGDKTAIVFINTKKSTDTLAKGLDKA 527

Query: 132 EYQVTTLHNCMSQEQREISLEGFRNKKYNVLVATDVAVAGRGID 1
            Y+VTTLH   SQEQREISLEGFR K+YNVLVATD  VAGRGID
Sbjct: 528 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATD--VAGRGID 569


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