BLASTX nr result

ID: Bupleurum21_contig00001251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001251
         (995 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304492.1| tubulin, beta chain [Populus trichocarpa] gi...   638   0.0  
gb|ABS50665.1| beta-tubulin [Eucalyptus grandis] gi|383081782|db...   638   0.0  
gb|AFY03628.1| beta-tubulin, partial [Eucalyptus globulus]            637   0.0  
ref|XP_002509801.1| tubulin beta chain, putative [Ricinus commun...   637   0.0  
ref|XP_002273514.1| PREDICTED: tubulin beta-1 chain [Vitis vinif...   636   e-180

>ref|XP_002304492.1| tubulin, beta chain [Populus trichocarpa]
           gi|222841924|gb|EEE79471.1| tubulin, beta chain [Populus
           trichocarpa]
          Length = 444

 Score =  638 bits (1645), Expect = 0.0
 Identities = 307/330 (93%), Positives = 314/330 (95%)
 Frame = +1

Query: 4   MREILHIQAGQCGNQIGGKFWEVVCEEHGIDATGNYHGDSHVQLERVNVYYNEASGGRYV 183
           MREILHIQAGQCGNQIGGKFWEVVC+EHGID TGNY G+SHVQLERVNVYYNEASGGRYV
Sbjct: 1   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYTGNSHVQLERVNVYYNEASGGRYV 60

Query: 184 PRAVLVDLEPGTMDSLRTGPYGQIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 363
           PRAVL+DLEPGTMDSLRTGPYG+IFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRTGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 364 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 543
           RKEAENCDCLQGFQ+CH              ISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 544 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 723
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240

Query: 724 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWDSKNMM 903
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR+LTIPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDAKNMM 300

Query: 904 CAADPRHGRYLTASAMFRGKMSTKEVDEQM 993
           CAADPRHGRYLTASAMFRGKMSTKEVDEQM
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQM 330


>gb|ABS50665.1| beta-tubulin [Eucalyptus grandis] gi|383081782|dbj|BAM05543.1|
           beta-tubulin 1 [Eucalyptus pilularis]
          Length = 444

 Score =  638 bits (1645), Expect = 0.0
 Identities = 307/330 (93%), Positives = 313/330 (94%)
 Frame = +1

Query: 4   MREILHIQAGQCGNQIGGKFWEVVCEEHGIDATGNYHGDSHVQLERVNVYYNEASGGRYV 183
           MREILH+QAGQCGNQIGGKFWEVVCEEHGIDA GNY GDSHVQLERVNVYYNEASGGRYV
Sbjct: 1   MREILHVQAGQCGNQIGGKFWEVVCEEHGIDAAGNYTGDSHVQLERVNVYYNEASGGRYV 60

Query: 184 PRAVLVDLEPGTMDSLRTGPYGQIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 363
           PRAVL+DLEPGTMDSLRTGPYG+IFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRTGPYGRIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 364 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 543
           RKEAENCDCLQGFQ+CH              ISKIREE+PDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEFPDRMMLTFSVFPSPKVSDTVV 180

Query: 544 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 723
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL NPSFGDLNHLISTTMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLINPSFGDLNHLISTTMSGVTCCL 240

Query: 724 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWDSKNMM 903
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWDAKNMM 300

Query: 904 CAADPRHGRYLTASAMFRGKMSTKEVDEQM 993
           CAADPRHGRYLTASAMFRGKMSTKEVDEQM
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQM 330


>gb|AFY03628.1| beta-tubulin, partial [Eucalyptus globulus]
          Length = 405

 Score =  637 bits (1644), Expect = 0.0
 Identities = 307/330 (93%), Positives = 313/330 (94%)
 Frame = +1

Query: 4   MREILHIQAGQCGNQIGGKFWEVVCEEHGIDATGNYHGDSHVQLERVNVYYNEASGGRYV 183
           MREILH+QAGQCGNQIGGKFWEVVCEEHGIDA GNY GDSHVQLERVNVYYNEASGGRYV
Sbjct: 1   MREILHVQAGQCGNQIGGKFWEVVCEEHGIDAXGNYTGDSHVQLERVNVYYNEASGGRYV 60

Query: 184 PRAVLVDLEPGTMDSLRTGPYGQIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 363
           PRAVL+DLEPGTMDSLRTGPYG+IFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRTGPYGRIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 364 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 543
           RKEAENCDCLQGFQ+CH              ISKIREE+PDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEFPDRMMLTFSVFPSPKVSDTVV 180

Query: 544 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 723
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL NPSFGDLNHLISTTMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLINPSFGDLNHLISTTMSGVTCCL 240

Query: 724 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWDSKNMM 903
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWDAKNMM 300

Query: 904 CAADPRHGRYLTASAMFRGKMSTKEVDEQM 993
           CAADPRHGRYLTASAMFRGKMSTKEVDEQM
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQM 330


>ref|XP_002509801.1| tubulin beta chain, putative [Ricinus communis]
           gi|223549700|gb|EEF51188.1| tubulin beta chain, putative
           [Ricinus communis]
          Length = 445

 Score =  637 bits (1644), Expect = 0.0
 Identities = 307/330 (93%), Positives = 314/330 (95%)
 Frame = +1

Query: 4   MREILHIQAGQCGNQIGGKFWEVVCEEHGIDATGNYHGDSHVQLERVNVYYNEASGGRYV 183
           MREILHIQAGQCGNQIGGKFWEVVC+EHGID TGNY G+SHVQLERVNVYYNEASGGRYV
Sbjct: 1   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYVGNSHVQLERVNVYYNEASGGRYV 60

Query: 184 PRAVLVDLEPGTMDSLRTGPYGQIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 363
           PRAVL+DLEPGTMDSLRTGPYG+IFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRTGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 364 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 543
           RKEAENCDCLQGFQ+CH              ISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 544 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 723
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240

Query: 724 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWDSKNMM 903
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR+LTIPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDAKNMM 300

Query: 904 CAADPRHGRYLTASAMFRGKMSTKEVDEQM 993
           CAADPRHGRYLTASAMFRGKMSTKEVDEQM
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQM 330


>ref|XP_002273514.1| PREDICTED: tubulin beta-1 chain [Vitis vinifera]
          Length = 444

 Score =  636 bits (1641), Expect = e-180
 Identities = 306/330 (92%), Positives = 313/330 (94%)
 Frame = +1

Query: 4   MREILHIQAGQCGNQIGGKFWEVVCEEHGIDATGNYHGDSHVQLERVNVYYNEASGGRYV 183
           MREILHIQAGQCGNQIGGKFWEVVC+EHGID  GNY GDSH+QLERVNVYYNEASGGRYV
Sbjct: 1   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDTKGNYVGDSHLQLERVNVYYNEASGGRYV 60

Query: 184 PRAVLVDLEPGTMDSLRTGPYGQIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 363
           PRAVL+DLEPGTMDSLRTGPYG+IFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRTGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 364 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 543
           RKEAENCDCLQGFQ+CH              ISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 544 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 723
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240

Query: 724 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWDSKNMM 903
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR+LTIPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDAKNMM 300

Query: 904 CAADPRHGRYLTASAMFRGKMSTKEVDEQM 993
           CAADPRHGRYLTASAMFRGKMSTKEVDEQM
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQM 330


Top