BLASTX nr result
ID: Bupleurum21_contig00001246
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00001246 (404 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK95729.1| unknown [Populus trichocarpa] 64 1e-10 ref|XP_002320843.1| predicted protein [Populus trichocarpa] gi|2... 64 1e-10 gb|AFK45713.1| unknown [Medicago truncatula] 65 2e-10 gb|ACJ83933.1| unknown [Medicago truncatula] 65 2e-10 ref|XP_002280114.1| PREDICTED: uncharacterized protein At4g01150... 61 1e-09 >gb|ABK95729.1| unknown [Populus trichocarpa] Length = 164 Score = 64.3 bits (155), Expect(2) = 1e-10 Identities = 30/41 (73%), Positives = 36/41 (87%), Gaps = 1/41 (2%) Frame = -2 Query: 121 FQIRASSTEET-VDTGEIFADIKEKWDALENKSTVLLYGGG 2 FQ RASS+EE+ VD EIF D+KEKWDA+ENKSTV++YGGG Sbjct: 59 FQTRASSSEESPVDANEIFTDLKEKWDAVENKSTVIIYGGG 99 Score = 26.6 bits (57), Expect(2) = 1e-10 Identities = 9/12 (75%), Positives = 11/12 (91%) Frame = -3 Query: 270 TQCFASPYLPPR 235 T+C+A PYLPPR Sbjct: 22 TRCYALPYLPPR 33 >ref|XP_002320843.1| predicted protein [Populus trichocarpa] gi|222861616|gb|EEE99158.1| predicted protein [Populus trichocarpa] Length = 151 Score = 64.3 bits (155), Expect(2) = 1e-10 Identities = 30/41 (73%), Positives = 36/41 (87%), Gaps = 1/41 (2%) Frame = -2 Query: 121 FQIRASSTEET-VDTGEIFADIKEKWDALENKSTVLLYGGG 2 FQ RASS+EE+ VD EIF D+KEKWDA+ENKSTV++YGGG Sbjct: 46 FQTRASSSEESPVDANEIFTDLKEKWDAVENKSTVIIYGGG 86 Score = 26.6 bits (57), Expect(2) = 1e-10 Identities = 9/12 (75%), Positives = 11/12 (91%) Frame = -3 Query: 270 TQCFASPYLPPR 235 T+C+A PYLPPR Sbjct: 9 TRCYALPYLPPR 20 >gb|AFK45713.1| unknown [Medicago truncatula] Length = 161 Score = 65.5 bits (158), Expect(2) = 2e-10 Identities = 32/42 (76%), Positives = 36/42 (85%), Gaps = 3/42 (7%) Frame = -2 Query: 118 QIRASSTEET---VDTGEIFADIKEKWDALENKSTVLLYGGG 2 Q RASS+EET +DT E+F D+KEKWDALENKSTVLLYGGG Sbjct: 55 QTRASSSEETSTSLDTNELFTDLKEKWDALENKSTVLLYGGG 96 Score = 24.6 bits (52), Expect(2) = 2e-10 Identities = 9/12 (75%), Positives = 10/12 (83%) Frame = -3 Query: 270 TQCFASPYLPPR 235 T+C A PYLPPR Sbjct: 23 TRCSALPYLPPR 34 >gb|ACJ83933.1| unknown [Medicago truncatula] Length = 161 Score = 65.5 bits (158), Expect(2) = 2e-10 Identities = 32/42 (76%), Positives = 36/42 (85%), Gaps = 3/42 (7%) Frame = -2 Query: 118 QIRASSTEET---VDTGEIFADIKEKWDALENKSTVLLYGGG 2 Q RASS+EET +DT E+F D+KEKWDALENKSTVLLYGGG Sbjct: 55 QTRASSSEETSTSLDTNELFTDLKEKWDALENKSTVLLYGGG 96 Score = 24.6 bits (52), Expect(2) = 2e-10 Identities = 9/12 (75%), Positives = 10/12 (83%) Frame = -3 Query: 270 TQCFASPYLPPR 235 T+C A PYLPPR Sbjct: 23 TRCSALPYLPPR 34 >ref|XP_002280114.1| PREDICTED: uncharacterized protein At4g01150, chloroplastic [Vitis vinifera] Length = 166 Score = 61.2 bits (147), Expect(2) = 1e-09 Identities = 29/40 (72%), Positives = 35/40 (87%), Gaps = 1/40 (2%) Frame = -2 Query: 118 QIRASSTEET-VDTGEIFADIKEKWDALENKSTVLLYGGG 2 Q+RASS+EET ++T E+F D+K KWDALENKSTV LYGGG Sbjct: 62 QVRASSSEETSLNTEELFTDLKAKWDALENKSTVFLYGGG 101 Score = 26.2 bits (56), Expect(2) = 1e-09 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 8/24 (33%) Frame = -3 Query: 282 PRLP--------TQCFASPYLPPR 235 PRLP T+C A PYLPPR Sbjct: 21 PRLPATAAANAATRCSALPYLPPR 44