BLASTX nr result
ID: Bupleurum21_contig00001238
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00001238
(1647 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271605.1| PREDICTED: protein MEI2-like 2-like [Vitis v... 629 e-178
ref|XP_003546575.1| PREDICTED: protein MEI2-like 2-like [Glycine... 606 e-171
ref|XP_003533847.1| PREDICTED: protein MEI2-like 2-like [Glycine... 605 e-170
ref|XP_003595581.1| Polyadenylate-binding protein [Medicago trun... 594 e-167
gb|AAT39004.1| AML1 [Citrus unshiu] 593 e-167
>ref|XP_002271605.1| PREDICTED: protein MEI2-like 2-like [Vitis vinifera]
Length = 860
Score = 629 bits (1623), Expect = e-178
Identities = 347/559 (62%), Positives = 390/559 (69%), Gaps = 19/559 (3%)
Frame = +1
Query: 1 LPVLPHGKLKLNHAEDGFQSVDDLSSTLNKVHTDEDA-ESLGDDKYHAIGNLLPDDENEL 177
LPVLPH KL LN E QS+DD L+K+ D +A ESL DD HAIG+LLPDDE+EL
Sbjct: 51 LPVLPHEKLNLNDTEHCCQSIDDAG--LDKLQQDVEAGESLEDDGIHAIGSLLPDDEDEL 108
Query: 178 LAGIVDGFDLSGCQN---QXXXXXXXXXXXXXXXXXXXXXXXXXRVSKIGVSNSLGRSGV 348
LAGI+D FDLSG N ++K+ +S+ + +G+
Sbjct: 109 LAGIMDDFDLSGLSNPMEDVEEYDLFGSGGGMELEIDPQESLNMGMAKVSLSDGVVGNGL 168
Query: 349 LPYSPSNCLGAVVGEHP-----SRTLFVRNINSNVEDSELRTMFEQYGDIRTLYTACKHR 513
Y N G V GEHP SRTLFVRNINSNVEDSELRT+FEQYG IRTLYTACKHR
Sbjct: 169 AQYGLPNGSGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRTLFEQYGAIRTLYTACKHR 228
Query: 514 GFVMISYYDIRAARTAMRALQNKPLRGRKLDIHFSIPKDNPSDKDMNQGTLVVFNLDPSV 693
GFVMISYYDIRAARTAMRALQNKPLR RKLDIHFSIPKDNPSDKD+NQGTLVVFNLDPSV
Sbjct: 229 GFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSV 288
Query: 694 SNDVLLQIFGEYGEVKEIRETPHKRHHKFVEFYDVRASEAALKSLNRSDIAGKRIKLEPS 873
SND L QIFG YGEVKEIRETPHKRHHKF+EFYDVRA+EAAL+SLNRSDIAGKRIKLEPS
Sbjct: 289 SNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRSLNRSDIAGKRIKLEPS 348
Query: 874 RPGGIRRNFMLQLSQDLEQDDSRSFRLQVGSSIANSTPGIWAHYSNPSEHSSLQSL-KSP 1050
RPGG RRN MLQL+Q+LEQD+SRSFR VGS +ANS PG WA +S+P EHS LQSL KSP
Sbjct: 349 RPGGARRNLMLQLNQELEQDESRSFRHHVGSPMANSPPGSWAQFSSPIEHSPLQSLSKSP 408
Query: 1051 VLGSMIPAVGNSLPGLASILHPQLSNPRKIAPIGKDLGRGTVGEHTYMNGNLNHGVGYMQ 1230
++ P N LPGLASIL+ Q+SN K+APIGKD GRG E+ + N N NHG + Q
Sbjct: 409 GFRTVSPTTSNHLPGLASILNSQISNSVKVAPIGKDQGRGIHVENIFNNTNSNHGTAFQQ 468
Query: 1231 SHSLPESKMNHYSAI-STFSDSTSYGSGVETLSGPQFLWGSPNFKREQPNLSMWQPPPMK 1407
SHS E + Y S+F STS GSG+ETLSGPQFLWGSP E N S WQPP M
Sbjct: 469 SHSFSEPNLGPYPGNGSSFGASTSNGSGIETLSGPQFLWGSPAPYSEHTNSSAWQPPSMG 528
Query: 1408 PAY------HGFTYGGHHASVMGSSQPSRQHHLHKFESAPSGNPFESHFGHYQESSDPLH 1569
+ GF Y G H S +GS SR HH H SAPSG P E HFG++ ES +
Sbjct: 529 HPFASNGQGRGFPYSGRHGSFLGS---SRHHHHHHVGSAPSGVPLERHFGYFPESPEASF 585
Query: 1570 FNRPAFGDM--VYNDKSFM 1620
AFG M +ND SFM
Sbjct: 586 MTPVAFGGMGLAHNDGSFM 604
>ref|XP_003546575.1| PREDICTED: protein MEI2-like 2-like [Glycine max]
Length = 862
Score = 606 bits (1563), Expect = e-171
Identities = 334/559 (59%), Positives = 382/559 (68%), Gaps = 19/559 (3%)
Frame = +1
Query: 1 LPVLPHGKLKLNHAEDGFQSVDDLSSTLNKVHTDEDAE-SLGDDKYHAIGNLLPDDENEL 177
LPVLPH KL LN +G+QS+DD+SS K+H D D SL D HAIG LPDDE EL
Sbjct: 51 LPVLPHEKLNLNETANGYQSIDDISSGFKKLHQDADGNGSLEDGDTHAIGPALPDDEEEL 110
Query: 178 LAGIVDGFDLSGCQNQXXXXXXXXXXXXXXXXXXXXXXXXXR---VSKIGVSNSLGRSGV 348
LAGI D FDLSG +SK+ ++S +G+
Sbjct: 111 LAGITDDFDLSGLPGSLEDLEEYDLFGSGGGMELETDPQEGLTVGLSKLSFADSTVGNGL 170
Query: 349 LPYSPSNCLGAVVGEHP-----SRTLFVRNINSNVEDSELRTMFEQYGDIRTLYTACKHR 513
PYS N +G V GEHP SRTLFVRNINSNVEDSELR +FEQYGDIRTLYTACKHR
Sbjct: 171 PPYSFPNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHR 230
Query: 514 GFVMISYYDIRAARTAMRALQNKPLRGRKLDIHFSIPKDNPSDKDMNQGTLVVFNLDPSV 693
GFVMISYYDIRAARTAMRALQNKPLR RKLDIHFSIPKDNPSDKD+NQGTLVVFNLDPSV
Sbjct: 231 GFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDINQGTLVVFNLDPSV 290
Query: 694 SNDVLLQIFGEYGEVKEIRETPHKRHHKFVEFYDVRASEAALKSLNRSDIAGKRIKLEPS 873
SN+ L QIFG YGEVKEIRETPHKRHHKF+EFYDVRA+EAALKSLNRSDIAGKRIKLEPS
Sbjct: 291 SNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 350
Query: 874 RPGGIRRNFMLQLSQDLEQDDSRSFRLQVGSSIANSTPGIWAHYSNPSEHSSLQSLK-SP 1050
RPGG RRN MLQL+Q+L+QD+SRSFR QVGS +ANS PG W +++P E +S+Q++ SP
Sbjct: 351 RPGGARRNLMLQLNQELDQDESRSFRYQVGSPVANSPPGNWLQFNSPVEQNSMQTINYSP 410
Query: 1051 VLGSMIPAVGNSLPGLASILHPQLSNPRKIAPIGKDLGRGTVGEHTYMNGNLNHGVGYMQ 1230
+ P GN LPGLASIL PQ+SN K A IG DL R + GEH + N +HG + Q
Sbjct: 411 GSRIISPTTGNHLPGLASILQPQVSNTVKAAAIGNDLERSSQGEHIFTGMNSSHGATF-Q 469
Query: 1231 SHSLPESKMNHY-SAISTFSDSTSYGSGVETLSGPQFLWGSPNFKREQPNLSMW------ 1389
SHSLPE K + Y A+S+ STS GS VETLSGPQFLWGSP E S W
Sbjct: 470 SHSLPEPKFSQYRGALSSIGPSTSNGSSVETLSGPQFLWGSPTLYSEHTKPSAWPRSSVG 529
Query: 1390 QPPPMKPAYHGFTYGGHHASVMGSSQPSRQHHLHKFESAPSGNPFESHFGHYQESSDPLH 1569
P H F Y ++S +GSSQ HH+ SAPSG PFE HFG + ESS+
Sbjct: 530 HPFASNGKSHAFPYSTQNSSFVGSSQHLHHHHV---GSAPSGLPFERHFGFHPESSETSF 586
Query: 1570 FNRPAFGDM--VYNDKSFM 1620
N +G + +ND + M
Sbjct: 587 MNNVGYGGIGPGHNDGNHM 605
>ref|XP_003533847.1| PREDICTED: protein MEI2-like 2-like [Glycine max]
Length = 862
Score = 605 bits (1559), Expect = e-170
Identities = 331/560 (59%), Positives = 385/560 (68%), Gaps = 20/560 (3%)
Frame = +1
Query: 1 LPVLPHGKLKLNHAEDGFQSVDDLSSTLNKVHTDEDAE-SLGDDKYHAIGNLLPDDENEL 177
LPVLPH KL LN + +QS+DD+SS K+H D + SL D HAIG LPDDE EL
Sbjct: 51 LPVLPHEKLNLNETANAYQSIDDISSGFKKLHQDAEGNGSLEDGDTHAIGPALPDDEEEL 110
Query: 178 LAGIVDGFDLSGCQNQXXXXXXXXXXXXXXXXXXXXXXXXXR---VSKIGVSNSLGRSGV 348
LAGI+D FDLSG +SK+ ++S S +
Sbjct: 111 LAGIMDDFDLSGLPGSLEDLEEYDLFGCGGGMELETDPQESLTVGISKLSFADSTVGSVL 170
Query: 349 LPYSPSNCLGAVVGEHP-----SRTLFVRNINSNVEDSELRTMFEQYGDIRTLYTACKHR 513
PYS N +GAV GEHP SRTLFVRNINSNVEDSELR +FEQYGDIRTLYTACKHR
Sbjct: 171 PPYSFPNGVGAVAGEHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHR 230
Query: 514 GFVMISYYDIRAARTAMRALQNKPLRGRKLDIHFSIPKDNPSDKDMNQGTLVVFNLDPSV 693
GFVMISYYDIRAARTAMR+LQNKPLR RKLDIHFSIPKDNPSDKD+NQGTLVVFNLDPSV
Sbjct: 231 GFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPKDNPSDKDINQGTLVVFNLDPSV 290
Query: 694 SNDVLLQIFGEYGEVKEIRETPHKRHHKFVEFYDVRASEAALKSLNRSDIAGKRIKLEPS 873
SN+ L QIFG YGEVKEIRETPHKRHHKF+EFYDVRA+EAALKSLNRSDIAGKRIKLEPS
Sbjct: 291 SNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 350
Query: 874 RPGGIRRNFMLQLSQDLEQDDSRSFRLQVGSSIANSTPGIWAHYSNPSEHSSLQSLK-SP 1050
RPGG RRN MLQL+Q+L+Q++SRSFR QV S +ANS PG W +++P E +S+Q++ SP
Sbjct: 351 RPGGARRNLMLQLNQELDQEESRSFRYQVSSPVANSPPGNWLQFNSPVEQNSMQTINHSP 410
Query: 1051 VLGSMIPAVGNSLPGLASILHPQLSNPRKIAPIGKDLGRGTVGEHTYMNGNLNHGVGYMQ 1230
+ P GN LPGLASIL PQ+SN K A IG DLGR + GEH + N +HG + Q
Sbjct: 411 GSRIISPTTGNHLPGLASILQPQVSNAVKAAAIGNDLGRSSQGEHIFSGMNSSHGATF-Q 469
Query: 1231 SHSLPESKMNHY-SAISTFSDSTSYGSGVETLSGPQFLWGSPNFKREQPNLSMWQPPPMK 1407
SHSLPE K + Y A+S+ STS GS VETLSGPQFLWGSP E S+W +
Sbjct: 470 SHSLPEPKFSQYRGALSSIGPSTSNGSSVETLSGPQFLWGSPTLYSEHTKPSVWPRSSVG 529
Query: 1408 PAY-------HGFTYGGHHASVMGSSQPSRQHHLHKFESAPSGNPFESHFGHYQESSDPL 1566
+ H F Y ++S +GSSQ HH H SAPSG PFE HFG + ESS+
Sbjct: 530 HPFAASNGKSHAFPYSTQNSSFVGSSQ---HHHHHHVGSAPSGLPFERHFGFHPESSETS 586
Query: 1567 HFNRPAFG--DMVYNDKSFM 1620
N +G + +ND ++M
Sbjct: 587 FMNNVGYGGIGLGHNDGNYM 606
>ref|XP_003595581.1| Polyadenylate-binding protein [Medicago truncatula]
gi|47834691|gb|AAT38999.1| AML5 [Medicago truncatula]
gi|87241360|gb|ABD33218.1| RNA-binding region RNP-1 (RNA
recognition motif); RNA recognition motif 2 [Medicago
truncatula] gi|355484629|gb|AES65832.1|
Polyadenylate-binding protein [Medicago truncatula]
Length = 865
Score = 594 bits (1531), Expect = e-167
Identities = 331/570 (58%), Positives = 386/570 (67%), Gaps = 23/570 (4%)
Frame = +1
Query: 1 LPVLPHGKLKLNHAEDGFQSVDDLSSTLNKVHTDEDAE-SLGDDKYHAIGNLLPDDENEL 177
LPVLPH KL LN E+GFQSVDD+S+ K H + + SL + HAIG +LPDD+ EL
Sbjct: 51 LPVLPHEKLNLNETENGFQSVDDISTNFKKHHQEAELNGSLDNGNNHAIGTMLPDDDEEL 110
Query: 178 LAGIVDGFDLSGCQNQXXXXXXXXXXXXXXXXXXXXXXXXXR---VSKIGVSNSLGRSGV 348
LAGI+D FDL G +SK+ +S+S + +
Sbjct: 111 LAGIMDDFDLRGLPGSLEDLEEYDLFDSSGGLELETDPQESLSVGISKLSLSDSSVGNSM 170
Query: 349 LPYSPSNCLGAVV-------GEHPSRTLFVRNINSNVEDSELRTMFEQYGDIRTLYTACK 507
PYS N +G GEHPSRTLFVRNINSNVED+ELRT+FEQYGDIRTLYTACK
Sbjct: 171 PPYSLPNGVGGGAVAGEHPYGEHPSRTLFVRNINSNVEDTELRTLFEQYGDIRTLYTACK 230
Query: 508 HRGFVMISYYDIRAARTAMRALQNKPLRGRKLDIHFSIPKDNPSDKDMNQGTLVVFNLDP 687
HRGFVMISYYDIRAARTAMRALQNKPLR RKLDIHFSIPKDNPSDKD+NQGTLVVFNLDP
Sbjct: 231 HRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDINQGTLVVFNLDP 290
Query: 688 SVSNDVLLQIFGEYGEVKEIRETPHKRHHKFVEFYDVRASEAALKSLNRSDIAGKRIKLE 867
SVSN+ L QIFG YGEVKEIRETPHKRHHKF+E+YDVRA+EAALKSLNRSDIAGKRIKLE
Sbjct: 291 SVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLE 350
Query: 868 PSRPGGIRRNFMLQLSQDLEQDDSRSFRLQVGSSIANSTPGIWAHYSNPSEHSSLQSLK- 1044
PSRPGG RRN MLQL+Q+L+QD+SRSFR QVGS +A S PG W +++P E SSL +L
Sbjct: 351 PSRPGGARRNLMLQLNQELDQDESRSFRYQVGSPLAGSPPGNWLQFNSPIEQSSLPNLNH 410
Query: 1045 SPVLGSMIPAVGNSLPGLASILHPQLSNPRKIAPIGKDLGRGTVGEHTYMNGNLNHGVGY 1224
SP M P N LPGLASIL PQLSN K A IG+D+GR + G+H + N + G +
Sbjct: 411 SPGSKIMSPTTSNHLPGLASILQPQLSNTVKAATIGQDIGRSSHGDHIFPNKISSAGSNF 470
Query: 1225 MQSHSLPESKMNHY-SAISTFSDSTSYGSGVETLSGPQFLWGSPNFKREQPNLSMWQPPP 1401
SHSLPE K + Y A+S+F STS GS VETL+ PQFLWGSPN E S W P
Sbjct: 471 -NSHSLPEPKFSPYRGALSSFGASTSNGSSVETLTAPQFLWGSPNLSSEPTKPSAWPRPS 529
Query: 1402 M-------KPAYHGFTYGGHHASVMGSSQPSRQHHLHKFESAPSGNPFESHFGHYQESSD 1560
+ H F Y + S + SSQ +QHH H SAPSG PFE HFG + +SS+
Sbjct: 530 VGHQLSTSNGTSHAFPYSSQNNSFVSSSQ--QQHHHHHVGSAPSGLPFERHFGFFPKSSE 587
Query: 1561 PLHFNRPAFGDM--VYNDKSFM-GARSSGN 1641
N + M +ND ++M + SGN
Sbjct: 588 TSLMNNVGYRGMGLGHNDGNYMLNSGISGN 617
>gb|AAT39004.1| AML1 [Citrus unshiu]
Length = 858
Score = 593 bits (1530), Expect = e-167
Identities = 339/572 (59%), Positives = 387/572 (67%), Gaps = 25/572 (4%)
Frame = +1
Query: 1 LPVLPHGKLKLNHAEDGFQSVDDLSSTLNKVH----TDEDAESLGDDKYHAIGNLLPDDE 168
LPVLPH KL LN G QSVD++SS L+KVH +D+ E + + AIGN LPDDE
Sbjct: 50 LPVLPHEKLNLNAMGLGRQSVDNISSGLSKVHHGVSSDDPLEGIMNP---AIGNSLPDDE 106
Query: 169 NELLAGIVDGFDLSGCQNQXXXXXXXXXXXXXXXXXXXXXXXXX---RVSKIGVSNSLGR 339
+ELLAGI+D FDL G + +SKI +S+S
Sbjct: 107 DELLAGIMDDFDLRGLPSSLEDLEDYDIFGSGGGMELEGEPQESLSMSMSKISISDSASG 166
Query: 340 SGVLPYSPSNCLGAVVGEHP-----SRTLFVRNINSNVEDSELRTMFEQYGDIRTLYTAC 504
+G+L YS N G V GEHP SRTLFVRNINSNVEDSELR +FEQYGDIRTLYTAC
Sbjct: 167 NGLLHYSVPNGAGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTAC 226
Query: 505 KHRGFVMISYYDIRAARTAMRALQNKPLRGRKLDIHFSIPKDNPSDKDMNQGTLVVFNLD 684
KHRGFVMISYYDIRAARTAMRALQNKPLR RKLDIHFSIPKDNPSDKD+NQGTLVVFNLD
Sbjct: 227 KHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLD 286
Query: 685 PSVSNDVLLQIFGEYGEVKEIRETPHKRHHKFVEFYDVRASEAALKSLNRSDIAGKRIKL 864
PSVSN+ L QIFG YGEVKEIRETPHKRHHKF+EFYDVRA+EAALKSLNRSDIAGKRIKL
Sbjct: 287 PSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKL 346
Query: 865 EPSRPGGIRRNFMLQLSQDLEQDDSRSFRLQVGSSIANSTPGIWAHYSNPSEHSSLQSL- 1041
EPSRPGG RRN MLQL+Q+LEQD+SR + QVGS I NS PG W +S+P EH+ LQ++
Sbjct: 347 EPSRPGGARRNLMLQLNQELEQDESRILQHQVGSPITNSPPGNWVQFSSPIEHNPLQTIS 406
Query: 1042 KSPVLGSMIPAVGNSLPGLASILHPQLSNPRKIAPIGKDLGRGTVGEHTYMNGNLNHGVG 1221
KSP +M P N +PGLASILHPQ+S KIAPIGKD GRG++ EH N +G
Sbjct: 407 KSPNFRNMSPTTSNHMPGLASILHPQVSTLEKIAPIGKDQGRGSLMEHALTNTISANGAS 466
Query: 1222 YMQSHSLPESKMNHY-SAISTFSDSTSYGSGVETLSGPQFLWGSPNFKREQPNLSMWQPP 1398
+ QS+S E K+ Y +S+F S S GSGVETLSGPQFLWGSP+ E + WQ
Sbjct: 467 FQQSNSFSEPKIGLYRGTVSSFGPSPSNGSGVETLSGPQFLWGSPSRYSEHSSSPAWQTS 526
Query: 1399 PMKPAY------HGFTYGGHHASVMGSSQPSRQHHLHKFESAPSGNPFESHFGHYQESSD 1560
M + HG Y G S +GSSQ HH+ SAPSG P E FG ES +
Sbjct: 527 SMGHPFSSNGKIHGLPYSGRQGSFLGSSQ---HHHI---GSAPSGVPLERRFGFLPESPE 580
Query: 1561 PLHFNRPAFGDM--VYNDKSF---MGARSSGN 1641
N AF M ND SF MG+R+S N
Sbjct: 581 TSFMNPVAFCGMGIGQNDGSFMVNMGSRASVN 612