BLASTX nr result
ID: Bupleurum21_contig00001227
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00001227
(713 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285721.1| PREDICTED: tubulin alpha-1 chain [Vitis vini... 425 e-117
ref|NP_197478.1| tubulin alpha-3/alpha-5 chain [Arabidopsis thal... 425 e-117
ref|XP_003562846.1| PREDICTED: tubulin alpha-1 chain-like [Brach... 423 e-116
ref|NP_001060075.1| Os07g0574800 [Oryza sativa Japonica Group] g... 423 e-116
sp|Q43473.1|TBA1_HORVU RecName: Full=Tubulin alpha-1 chain gi|14... 423 e-116
>ref|XP_002285721.1| PREDICTED: tubulin alpha-1 chain [Vitis vinifera]
Length = 449
Score = 425 bits (1092), Expect = e-117
Identities = 214/237 (90%), Positives = 218/237 (91%)
Frame = -1
Query: 713 MPSDNTVGVEHDAFNTFFSETGAGKHVPRAIFLDLEPTVIDEVRTGTYRQLFHPEQLISG 534
MPSD TVGV HDAFNTFFSETGAGKHVPRAIF+DLEPTVIDEVRTGTYRQLFHPEQLISG
Sbjct: 36 MPSDTTVGVGHDAFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISG 95
Query: 533 KEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFIVSNAVXXXXXXXXXXXXXX 354
KEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGF+V NAV
Sbjct: 96 KEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
Query: 353 XXSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRK 174
SVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICR+
Sbjct: 156 RLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRR 215
Query: 173 SLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSY 3
SLDIERPTYTNLNRLISQ+ISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSY
Sbjct: 216 SLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSY 272
>ref|NP_197478.1| tubulin alpha-3/alpha-5 chain [Arabidopsis thaliana]
gi|15241179|ref|NP_197479.1| tubulin alpha-3/alpha-5
chain [Arabidopsis thaliana]
gi|297808045|ref|XP_002871906.1| tubulin alpha-3
[Arabidopsis lyrata subsp. lyrata]
gi|297812159|ref|XP_002873963.1| tubulin alpha-3
[Arabidopsis lyrata subsp. lyrata]
gi|408407916|sp|Q56WH1.2|TBA3_ARATH RecName:
Full=Tubulin alpha-3 chain
gi|408407918|sp|B9DHQ0.2|TBA5_ARATH RecName:
Full=Tubulin alpha-5 chain
gi|13605805|gb|AAK32888.1|AF367301_1
AT5g19770/T29J13_190 [Arabidopsis thaliana]
gi|166912|gb|AAA32888.1| alpha-tubulin [Arabidopsis
thaliana] gi|166918|gb|AAA32891.1| alpha-5 tubulin
[Arabidopsis thaliana] gi|14532776|gb|AAK64169.1|
putative tubulin alpha-5 chain [Arabidopsis thaliana]
gi|17473826|gb|AAL38340.1| unknown protein [Arabidopsis
thaliana] gi|19310733|gb|AAL85097.1| putative tubulin
alpha-5 chain [Arabidopsis thaliana]
gi|23397154|gb|AAN31860.1| putative tubulin alpha-5
chain [Arabidopsis thaliana] gi|23397156|gb|AAN31861.1|
putative tubulin alpha-5 chain [Arabidopsis thaliana]
gi|23505949|gb|AAN28834.1| At5g19770/T29J13_190
[Arabidopsis thaliana] gi|24899739|gb|AAN65084.1|
unknown protein [Arabidopsis thaliana]
gi|297317743|gb|EFH48165.1| tubulin alpha-3 [Arabidopsis
lyrata subsp. lyrata] gi|297319800|gb|EFH50222.1|
tubulin alpha-3 [Arabidopsis lyrata subsp. lyrata]
gi|332005364|gb|AED92747.1| tubulin alpha-3/alpha-5
chain [Arabidopsis thaliana] gi|332005365|gb|AED92748.1|
tubulin alpha-3/alpha-5 chain [Arabidopsis thaliana]
Length = 450
Score = 425 bits (1092), Expect = e-117
Identities = 213/237 (89%), Positives = 218/237 (91%)
Frame = -1
Query: 713 MPSDNTVGVEHDAFNTFFSETGAGKHVPRAIFLDLEPTVIDEVRTGTYRQLFHPEQLISG 534
MPSD TVGV HDAFNTFFSETGAGKHVPRA+F+DLEPTVIDEVRTGTYRQLFHPEQLISG
Sbjct: 36 MPSDTTVGVAHDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISG 95
Query: 533 KEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFIVSNAVXXXXXXXXXXXXXX 354
KEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGF+V NAV
Sbjct: 96 KEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
Query: 353 XXSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRK 174
SVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICR+
Sbjct: 156 RLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRR 215
Query: 173 SLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSY 3
SLDIERPTYTNLNRLISQ+ISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSY
Sbjct: 216 SLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSY 272
>ref|XP_003562846.1| PREDICTED: tubulin alpha-1 chain-like [Brachypodium distachyon]
Length = 450
Score = 423 bits (1088), Expect = e-116
Identities = 212/237 (89%), Positives = 218/237 (91%)
Frame = -1
Query: 713 MPSDNTVGVEHDAFNTFFSETGAGKHVPRAIFLDLEPTVIDEVRTGTYRQLFHPEQLISG 534
MPSD+TVGV HDAFNTFFSETGAGKHVPRAIF+DLEPTVIDEVRTG YRQLFHPEQLISG
Sbjct: 36 MPSDSTVGVAHDAFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGAYRQLFHPEQLISG 95
Query: 533 KEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFIVSNAVXXXXXXXXXXXXXX 354
KEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGF+V NAV
Sbjct: 96 KEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
Query: 353 XXSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRK 174
SVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICR+
Sbjct: 156 RLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRR 215
Query: 173 SLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSY 3
SLDIERPTYTNLNRLISQ+ISSLTTSLRFDGAINVD+TEFQTNLVPYPRIHFMLSSY
Sbjct: 216 SLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSY 272
>ref|NP_001060075.1| Os07g0574800 [Oryza sativa Japonica Group]
gi|135399|sp|P28752.1|TBA1_ORYSJ RecName: Full=Tubulin
alpha-1 chain gi|20379|emb|CAA77988.1| alpha 1 tubulin
[Oryza sativa Japonica Group] gi|1136124|emb|CAA62918.1|
alfa-tubulin [Oryza sativa Japonica Group]
gi|34393570|dbj|BAC83168.1| Tubulin alpha-1 chain [Oryza
sativa Japonica Group] gi|50509129|dbj|BAD30236.1|
Tubulin alpha-1 chain [Oryza sativa Japonica Group]
gi|110617750|gb|ABG78594.1| alpha-tubulin [Oryza sativa
Japonica Group] gi|113611611|dbj|BAF21989.1|
Os07g0574800 [Oryza sativa Japonica Group]
gi|125558900|gb|EAZ04436.1| hypothetical protein
OsI_26583 [Oryza sativa Indica Group]
gi|125600815|gb|EAZ40391.1| hypothetical protein
OsJ_24840 [Oryza sativa Japonica Group]
gi|215695370|dbj|BAG90561.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215697286|dbj|BAG91280.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215740861|dbj|BAG97017.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 450
Score = 423 bits (1088), Expect = e-116
Identities = 212/237 (89%), Positives = 218/237 (91%)
Frame = -1
Query: 713 MPSDNTVGVEHDAFNTFFSETGAGKHVPRAIFLDLEPTVIDEVRTGTYRQLFHPEQLISG 534
MPSD TVGV HDAFNTFFSETGAGKHVPRAIF+DLEPTVIDEVRTG+YRQLFHPEQLISG
Sbjct: 36 MPSDTTVGVAHDAFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISG 95
Query: 533 KEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFIVSNAVXXXXXXXXXXXXXX 354
KEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGF+V NAV
Sbjct: 96 KEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
Query: 353 XXSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRK 174
SVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICR+
Sbjct: 156 RLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRR 215
Query: 173 SLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSY 3
SLDIERPTYTNLNRLISQ+ISSLTTSLRFDGAINVD+TEFQTNLVPYPRIHFMLSSY
Sbjct: 216 SLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSY 272
>sp|Q43473.1|TBA1_HORVU RecName: Full=Tubulin alpha-1 chain gi|1477428|emb|CAA67942.1|
alpha-tubulin 1 [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 423 bits (1087), Expect = e-116
Identities = 212/237 (89%), Positives = 217/237 (91%)
Frame = -1
Query: 713 MPSDNTVGVEHDAFNTFFSETGAGKHVPRAIFLDLEPTVIDEVRTGTYRQLFHPEQLISG 534
MPSD TVGV HDAFNTFFSETGAGKHVPRAIF+DLEPTVIDEVRTG YRQLFHPEQLISG
Sbjct: 36 MPSDTTVGVAHDAFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGAYRQLFHPEQLISG 95
Query: 533 KEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFIVSNAVXXXXXXXXXXXXXX 354
KEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGF+V NAV
Sbjct: 96 KEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
Query: 353 XXSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRK 174
SVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICR+
Sbjct: 156 RLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRR 215
Query: 173 SLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSY 3
SLDIERPTYTNLNRLISQ+ISSLTTSLRFDGAINVD+TEFQTNLVPYPRIHFMLSSY
Sbjct: 216 SLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSY 272