BLASTX nr result

ID: Bupleurum21_contig00001218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001218
         (1454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003816979.1| PREDICTED: uncharacterized protein LOC100991...    60   1e-06
ref|XP_003779416.1| PREDICTED: uncharacterized protein LOC100938...    58   5e-06
gb|EHH51534.1| hypothetical protein EGM_10925, partial [Macaca f...    57   9e-06

>ref|XP_003816979.1| PREDICTED: uncharacterized protein LOC100991173 [Pan paniscus]
          Length = 298

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 12/204 (5%)
 Frame = -1

Query: 968 CVYLIHPCLYLYLHTCIYI-PSLYTCTYLLVNIYIYTCAI*CLS-YTRALILVXXXXXXX 795
           C+Y  +  +Y+Y++ CIY+ P  YT  Y+ +++YI+ C    +  +T   I V       
Sbjct: 31  CIYT-YVYIYIYVYMCIYVYPYTYTYVYICISVYIHICVYMYIRIHTHMCIYVYPYTYTY 89

Query: 794 XXICV-------VS*HT-ICKC*CGCLHT*LXXXXXXSDTHFCVVCYTRFCVVRYTRGCQ 639
             IC+       +  +T +  C   C++T          TH CV  YT  CV  YT  C 
Sbjct: 90  VYICISVCIYVYIHIYTYVYICTHMCIYT---------CTHICVYMYTHMCVHMYTHMCT 140

Query: 638 VAILEV*FLTHLFYRFVIYLYITTHDLLRSST-IHLCINGFALYKCVFNCLH-LNYTCXX 465
              + +   TH+     +Y+ I T+  +      H+CI       CV  C+H   Y C  
Sbjct: 141 YVYMCICVYTHIC--MCVYMCIHTYAYVCVYVYTHICI-------CVCMCIHTYAYVCVC 191

Query: 464 XXXXXXLYIDIRNLLDLLEYYCIY 393
                 + + +   + +  Y C+Y
Sbjct: 192 VYTHMHMCVYVYTHMHICVYVCVY 215


>ref|XP_003779416.1| PREDICTED: uncharacterized protein LOC100938940 [Pongo abelii]
          Length = 292

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 18/210 (8%)
 Frame = -1

Query: 968 CVYL-------IHPCLYLYLHTCIYIP---SLYTCTYLLVNIYIYT-CAI*CLSYTRALI 822
           C+Y+       ++ C+Y+Y++ CIYI     +Y   Y  +  YIYT   I    YT   +
Sbjct: 93  CIYIYLYIYIRVYICIYIYVYMCIYIQMYIRIYMHIYAYIYAYIYTYIHIHICIYTHICV 152

Query: 821 LVXXXXXXXXXICVVS*HTICKC*CGCLHT*LXXXXXXSDTHFCVVCYTRFCV----VRY 654
            +         ICV   HT     C C++T          T+ CV      C+      Y
Sbjct: 153 YICVYMHMYVYICV---HTYV---CVCVYT---------HTYVCVYVCIYVCIHVYMCVY 197

Query: 653 TRGCQVAILEV*FLTHLFYRFVIYLYITTHDLLRSSTIHLCINGFA---LYKCVFNCLHL 483
           T  C    + +   TH+      Y+Y+ TH  +   T H+C+  +    +Y CV+ C+H 
Sbjct: 198 THICVYMCVYMCVYTHICMCIHTYMYVYTHIYVCVYT-HICMCIYVYTHIYVCVYMCIH- 255

Query: 482 NYTCXXXXXXXXLYIDIRNLLDLLEYYCIY 393
            Y C        +Y+ I   +    Y C+Y
Sbjct: 256 TYICVYICVYTRIYVCI--YVSTHVYMCVY 283


>gb|EHH51534.1| hypothetical protein EGM_10925, partial [Macaca fascicularis]
          Length = 234

 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 16/209 (7%)
 Frame = -1

Query: 971 HCVYLIHPCLYLYLHTCIYIPSLYTCTYLLVNIYIYTCAI*CLSYTRALILVXXXXXXXX 792
           H    +  C ++Y++ C+ +   YT TYL V +Y +T    C+ YT A + +        
Sbjct: 52  HICVCVCVCTHIYIYVCVCV---YTYTYLCVCVYTHTYMCMCV-YTYAYMCM-------- 99

Query: 791 XICVVS*HTICKC*CGCLHT*LXXXXXXSDTHFCVVCYTRFCVVRYTRGCQVAILEV--- 621
             CV +   I  C C C+H  +         + CV  YT  CV  YT  C    + +   
Sbjct: 100 --CVYT--YIHMCVCVCIHIYMC-------VYVCVYTYTCVCVYTYTYMCMCVCVHIYTC 148

Query: 620 -*FLTHLF-YRFV-------IYLYITTHDLLRSSTIHLCIN-GFALYKCVFNCLHLN--- 480
               TH++ Y +V       IY+Y+ TH  +    +++C++    +Y CV  C+H++   
Sbjct: 149 MCVCTHIYIYVYVYVCVHIRIYVYVYTHTHI-YVYVYVCVHIRIYIYMCV--CIHIHVYV 205

Query: 479 YTCXXXXXXXXLYIDIRNLLDLLEYYCIY 393
           Y C        +Y+ I   + +  Y  +Y
Sbjct: 206 YVCVHIHIYVYVYVYIYIYIRIYVYVYMY 234


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