BLASTX nr result

ID: Bupleurum21_contig00001207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001207
         (877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF17670.1| putative pyruvate dehydrogenase E1 beta subunit [...   275   1e-71
emb|CBI28658.3| unnamed protein product [Vitis vinifera]              274   2e-71
ref|XP_002269441.1| PREDICTED: pyruvate dehydrogenase E1 compone...   274   2e-71
ref|XP_002519664.1| pyruvate dehydrogenase, putative [Ricinus co...   272   8e-71
ref|XP_003633031.1| PREDICTED: LOW QUALITY PROTEIN: pyruvate deh...   271   1e-70

>gb|ACF17670.1| putative pyruvate dehydrogenase E1 beta subunit [Capsicum annuum]
          Length = 408

 Score =  275 bits (702), Expect = 1e-71
 Identities = 143/205 (69%), Positives = 157/205 (76%), Gaps = 4/205 (1%)
 Frame = -3

Query: 605 MALIFQAVGATSAISSSASFDFKKLHFA-APRFLSEKKGSFFVVRSDAKMN---NRISSR 438
           MA I Q +GA +A++S  S D KK   + +PR LS +KGS FVV SD +++   N    R
Sbjct: 1   MAAIIQGIGAATALTSPNSLDIKKSFLSISPRSLSVRKGSSFVVSSDGRLSYGLNGRGGR 60

Query: 437 AEKLVXXXXXXXXXXXXXXXXXXSGHELLLFEALREGLEEEMDRDARVCVMGEDVGHYGG 258
           AE  +                   GHELLLFEALREGLEEEMDRD  VCVMGEDVGHYGG
Sbjct: 61  AEHFITNAVAAKEDTAAASTSSKPGHELLLFEALREGLEEEMDRDPTVCVMGEDVGHYGG 120

Query: 257 SYKVTKGLAPKFGDLRVLDTPIAENSFTGMGIGAAMTGLRPVIEGMNMGFLLLAFNQISN 78
           SYKVTKGLAPK+GDLRVLDTPIAENSFTGMGIGAAMTGLRPV+EGMNMGFLLLAFNQISN
Sbjct: 121 SYKVTKGLAPKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPVVEGMNMGFLLLAFNQISN 180

Query: 77  NCGMLHYTSGGQFTIPVVIRGPGGV 3
           NCGMLHYTSGGQF IP+VIRGPGGV
Sbjct: 181 NCGMLHYTSGGQFKIPIVIRGPGGV 205


>emb|CBI28658.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score =  274 bits (701), Expect = 2e-71
 Identities = 144/204 (70%), Positives = 159/204 (77%), Gaps = 3/204 (1%)
 Frame = -3

Query: 605 MALIFQAVGATSAISSSASFDFKKLHFAAPRFLSEKKGSFFVVRSDAKMNNRISSR---A 435
           MA IFQ +GA +A  ++A    +K H  +PRF+S +KGS FVVRSD + +   S R   A
Sbjct: 1   MAAIFQGIGAAAA--AAALPPAEKFHSQSPRFVSARKGSLFVVRSDGRPSLGSSPRSRGA 58

Query: 434 EKLVXXXXXXXXXXXXXXXXXXSGHELLLFEALREGLEEEMDRDARVCVMGEDVGHYGGS 255
           ++L+                   GHELLLFEALREGLEEEMDRD RVCVMGEDVGHYGGS
Sbjct: 59  QRLITNAVAAKADASVTSTASKPGHELLLFEALREGLEEEMDRDPRVCVMGEDVGHYGGS 118

Query: 254 YKVTKGLAPKFGDLRVLDTPIAENSFTGMGIGAAMTGLRPVIEGMNMGFLLLAFNQISNN 75
           YKVTKGLA K+GDLRVLDTPIAENSFTGMGIGAAMTGLRP+IEGMNMGFLLLAFNQISNN
Sbjct: 119 YKVTKGLATKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIIEGMNMGFLLLAFNQISNN 178

Query: 74  CGMLHYTSGGQFTIPVVIRGPGGV 3
           CGMLHYTSGGQF IPVVIRGPGGV
Sbjct: 179 CGMLHYTSGGQFKIPVVIRGPGGV 202


>ref|XP_002269441.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta [Vitis
           vinifera]
          Length = 405

 Score =  274 bits (701), Expect = 2e-71
 Identities = 144/204 (70%), Positives = 159/204 (77%), Gaps = 3/204 (1%)
 Frame = -3

Query: 605 MALIFQAVGATSAISSSASFDFKKLHFAAPRFLSEKKGSFFVVRSDAKMNNRISSR---A 435
           MA IFQ +GA +A  ++A    +K H  +PRF+S +KGS FVVRSD + +   S R   A
Sbjct: 1   MAAIFQGIGAAAA--AAALPPAEKFHSQSPRFVSARKGSLFVVRSDGRPSLGSSPRSRGA 58

Query: 434 EKLVXXXXXXXXXXXXXXXXXXSGHELLLFEALREGLEEEMDRDARVCVMGEDVGHYGGS 255
           ++L+                   GHELLLFEALREGLEEEMDRD RVCVMGEDVGHYGGS
Sbjct: 59  QRLITNAVAAKADASVTSTASKPGHELLLFEALREGLEEEMDRDPRVCVMGEDVGHYGGS 118

Query: 254 YKVTKGLAPKFGDLRVLDTPIAENSFTGMGIGAAMTGLRPVIEGMNMGFLLLAFNQISNN 75
           YKVTKGLA K+GDLRVLDTPIAENSFTGMGIGAAMTGLRP+IEGMNMGFLLLAFNQISNN
Sbjct: 119 YKVTKGLATKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIIEGMNMGFLLLAFNQISNN 178

Query: 74  CGMLHYTSGGQFTIPVVIRGPGGV 3
           CGMLHYTSGGQF IPVVIRGPGGV
Sbjct: 179 CGMLHYTSGGQFKIPVVIRGPGGV 202


>ref|XP_002519664.1| pyruvate dehydrogenase, putative [Ricinus communis]
           gi|223541081|gb|EEF42637.1| pyruvate dehydrogenase,
           putative [Ricinus communis]
          Length = 409

 Score =  272 bits (695), Expect = 8e-71
 Identities = 142/206 (68%), Positives = 153/206 (74%), Gaps = 5/206 (2%)
 Frame = -3

Query: 605 MALIFQAVGATSAISSSASFDFKKLHFAAPRFLSEKKGSFFVVRSDAKMNNRISS----- 441
           MA  FQ +GA +A++ S S D  K    + R LSE+K S  V+RSD   N  + S     
Sbjct: 1   MATTFQGLGAFTALTPSNSIDSNKFKLLSRRSLSERKASLLVIRSDGSNNVNLGSNSRGR 60

Query: 440 RAEKLVXXXXXXXXXXXXXXXXXXSGHELLLFEALREGLEEEMDRDARVCVMGEDVGHYG 261
           RAE L+                   GHELLLFEALREGLEEEMDRD  VCVMGEDVGHYG
Sbjct: 61  RAEHLITNAVATKADASAASSASKPGHELLLFEALREGLEEEMDRDPTVCVMGEDVGHYG 120

Query: 260 GSYKVTKGLAPKFGDLRVLDTPIAENSFTGMGIGAAMTGLRPVIEGMNMGFLLLAFNQIS 81
           GSYKVTKGLA KFGDLRVLDTPIAENSFTGMGIGAAMTGLRPV+EGMNMGFLLLAFNQIS
Sbjct: 121 GSYKVTKGLATKFGDLRVLDTPIAENSFTGMGIGAAMTGLRPVVEGMNMGFLLLAFNQIS 180

Query: 80  NNCGMLHYTSGGQFTIPVVIRGPGGV 3
           NNCGMLHYTSGGQF IP+VIRGPGGV
Sbjct: 181 NNCGMLHYTSGGQFKIPIVIRGPGGV 206


>ref|XP_003633031.1| PREDICTED: LOW QUALITY PROTEIN: pyruvate dehydrogenase E1 component
           subunit beta-like [Vitis vinifera]
          Length = 402

 Score =  271 bits (694), Expect = 1e-70
 Identities = 143/204 (70%), Positives = 156/204 (76%), Gaps = 3/204 (1%)
 Frame = -3

Query: 605 MALIFQAVGATSAISSSASFDFKKLHFAAPRFLSEKKGSFFVVRSDAKMNNRISSR---A 435
           MA IFQ +GA +A+ S+     KK H  + RF+S +KGS FVVRSD + +   S R   A
Sbjct: 1   MAAIFQGIGAAAALPSA-----KKFHSQSRRFVSARKGSLFVVRSDGRPSXGSSPRSRGA 55

Query: 434 EKLVXXXXXXXXXXXXXXXXXXSGHELLLFEALREGLEEEMDRDARVCVMGEDVGHYGGS 255
           + L+                   GHELLLFEALREGLEEEMDRD  VCVMGEDVGHYGGS
Sbjct: 56  QHLITNAVAAKADASATSTASKPGHELLLFEALREGLEEEMDRDPLVCVMGEDVGHYGGS 115

Query: 254 YKVTKGLAPKFGDLRVLDTPIAENSFTGMGIGAAMTGLRPVIEGMNMGFLLLAFNQISNN 75
           YKVTKGLA K+GDLRVLDTPIAENSFTGMGIGAAMTGLRP+IEGMNMGFLLLAFNQISNN
Sbjct: 116 YKVTKGLAAKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIIEGMNMGFLLLAFNQISNN 175

Query: 74  CGMLHYTSGGQFTIPVVIRGPGGV 3
           CGMLHYTSGGQF IPVVIRGPGGV
Sbjct: 176 CGMLHYTSGGQFKIPVVIRGPGGV 199


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