BLASTX nr result

ID: Bupleurum21_contig00001201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001201
         (940 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312936.1| predicted protein [Populus trichocarpa] gi|2...   185   2e-44
gb|AEZ55680.1| geranyl diphosphate synthase small subunit type I...   179   6e-43
ref|XP_004144868.1| PREDICTED: heterodimeric geranylgeranyl pyro...   177   2e-42
ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, puta...   175   2e-41
dbj|BAF98303.1| geranylgeranyl-diphosphate synthase [Hevea brasi...   172   1e-40

>ref|XP_002312936.1| predicted protein [Populus trichocarpa] gi|222849344|gb|EEE86891.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  185 bits (469), Expect = 2e-44
 Identities = 91/129 (70%), Positives = 105/129 (81%)
 Frame = -1

Query: 940 LDLEGGPNSVEFVLEKKYGEMGECSAVCGGLIAGASEDEIETLRKYGRAVGVLYQVVDDV 761
           LDLEGGPNSVEFV EKK+GEMGECSAVCGGL+AGA +DEI+ LR+YGRAVGVLYQVVDD+
Sbjct: 178 LDLEGGPNSVEFVQEKKFGEMGECSAVCGGLLAGAKDDEIQRLRRYGRAVGVLYQVVDDI 237

Query: 760 LEEKMRSQNXXXXXXXXXXKSYVRVYGVEKAMQVAEDLRGRAKKALDSFDKYGERLLPLY 581
           LE K               KSYV +YGVEKA++VAE+LR +AK+ LD F+KYGE +LPLY
Sbjct: 238 LEAKTMKSKVDEDKKKRKGKSYVALYGVEKAIEVAEELRAKAKEELDGFEKYGESVLPLY 297

Query: 580 SFVDYAADR 554
           SFVDYAADR
Sbjct: 298 SFVDYAADR 306


>gb|AEZ55680.1| geranyl diphosphate synthase small subunit type II.2 [Salvia
           miltiorrhiza]
          Length = 331

 Score =  179 bits (455), Expect = 6e-43
 Identities = 90/129 (69%), Positives = 107/129 (82%)
 Frame = -1

Query: 940 LDLEGGPNSVEFVLEKKYGEMGECSAVCGGLIAGASEDEIETLRKYGRAVGVLYQVVDDV 761
           LDLEGGPN+V+ V EKK+GEMG+CSAVCGGL+AGAS+DEIE LRKYGRAVG+LY+VVDD+
Sbjct: 197 LDLEGGPNAVDLVQEKKFGEMGQCSAVCGGLLAGASDDEIEHLRKYGRAVGILYEVVDDI 256

Query: 760 LEEKMRSQNXXXXXXXXXXKSYVRVYGVEKAMQVAEDLRGRAKKALDSFDKYGERLLPLY 581
            E K+  Q           KSYV VYGVEKAM+VAEDLR +AKK L+S +KYG+++LPLY
Sbjct: 257 RETKL--QPDEKDKSKSKGKSYVSVYGVEKAMEVAEDLRSQAKKELESLEKYGDKVLPLY 314

Query: 580 SFVDYAADR 554
           SFVDYAADR
Sbjct: 315 SFVDYAADR 323


>ref|XP_004144868.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic-like [Cucumis sativus]
           gi|449508802|ref|XP_004163415.1| PREDICTED:
           heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic-like [Cucumis sativus]
          Length = 335

 Score =  177 bits (450), Expect = 2e-42
 Identities = 85/129 (65%), Positives = 105/129 (81%)
 Frame = -1

Query: 940 LDLEGGPNSVEFVLEKKYGEMGECSAVCGGLIAGASEDEIETLRKYGRAVGVLYQVVDDV 761
           LDLEGGPNSVEFV EKK+GEM +CSAVCGGL+AGA + EI+ LR+YGRAVGVLYQVVDD+
Sbjct: 199 LDLEGGPNSVEFVQEKKFGEMAQCSAVCGGLLAGAEDHEIQRLRRYGRAVGVLYQVVDDI 258

Query: 760 LEEKMRSQNXXXXXXXXXXKSYVRVYGVEKAMQVAEDLRGRAKKALDSFDKYGERLLPLY 581
           LEE+ +  +          KSYV VYG+EKA +VAE+LR +AK  L+ F+KYG++++PLY
Sbjct: 259 LEEQSKKLDYTDESKRSKGKSYVEVYGIEKAKEVAEELRAKAKNELEGFEKYGDQVMPLY 318

Query: 580 SFVDYAADR 554
           SFVDYAADR
Sbjct: 319 SFVDYAADR 327


>ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
           gi|223530713|gb|EEF32584.1| geranyl geranyl
           pyrophosphate synthase, putative [Ricinus communis]
          Length = 345

 Score =  175 bits (443), Expect = 2e-41
 Identities = 88/129 (68%), Positives = 103/129 (79%)
 Frame = -1

Query: 940 LDLEGGPNSVEFVLEKKYGEMGECSAVCGGLIAGASEDEIETLRKYGRAVGVLYQVVDDV 761
           LDLEGGP+ VEF  EKKYGEM ECSAVCGGL+AGA +DEI+ LR+YGRAVGVLYQV+DDV
Sbjct: 211 LDLEGGPSFVEFAQEKKYGEMSECSAVCGGLLAGAEDDEIQRLRRYGRAVGVLYQVIDDV 270

Query: 760 LEEKMRSQNXXXXXXXXXXKSYVRVYGVEKAMQVAEDLRGRAKKALDSFDKYGERLLPLY 581
           LE K  + N          KSYV +YG+EKAM+VAE+LR +AKK LD F KYG+ ++PLY
Sbjct: 271 LEAK--AMNKENEEKRRNGKSYVSLYGIEKAMEVAEELRTQAKKELDGFAKYGDSVMPLY 328

Query: 580 SFVDYAADR 554
           SFVDYAADR
Sbjct: 329 SFVDYAADR 337


>dbj|BAF98303.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
          Length = 306

 Score =  172 bits (436), Expect = 1e-40
 Identities = 88/129 (68%), Positives = 103/129 (79%)
 Frame = -1

Query: 940 LDLEGGPNSVEFVLEKKYGEMGECSAVCGGLIAGASEDEIETLRKYGRAVGVLYQVVDDV 761
           LDLEG  NS EFV EKKYGEMGECSAVCGGL+AGA +DEI+ LR+YGRAVGVLY+V+DDV
Sbjct: 171 LDLEGSLNSAEFVQEKKYGEMGECSAVCGGLLAGAEDDEIQRLRRYGRAVGVLYKVIDDV 230

Query: 760 LEEKMRSQNXXXXXXXXXXKSYVRVYGVEKAMQVAEDLRGRAKKALDSFDKYGERLLPLY 581
           LE K  S+           KSYV +YGVEKA++VAE+LR +AKK LD F+KYGE + PLY
Sbjct: 231 LEAKSMSKE-DEENEKKKAKSYVSLYGVEKAVEVAEELRTKAKKELDGFEKYGESVQPLY 289

Query: 580 SFVDYAADR 554
           +FVDYAADR
Sbjct: 290 NFVDYAADR 298


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