BLASTX nr result
ID: Bupleurum21_contig00001201
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00001201 (940 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002312936.1| predicted protein [Populus trichocarpa] gi|2... 185 2e-44 gb|AEZ55680.1| geranyl diphosphate synthase small subunit type I... 179 6e-43 ref|XP_004144868.1| PREDICTED: heterodimeric geranylgeranyl pyro... 177 2e-42 ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, puta... 175 2e-41 dbj|BAF98303.1| geranylgeranyl-diphosphate synthase [Hevea brasi... 172 1e-40 >ref|XP_002312936.1| predicted protein [Populus trichocarpa] gi|222849344|gb|EEE86891.1| predicted protein [Populus trichocarpa] Length = 314 Score = 185 bits (469), Expect = 2e-44 Identities = 91/129 (70%), Positives = 105/129 (81%) Frame = -1 Query: 940 LDLEGGPNSVEFVLEKKYGEMGECSAVCGGLIAGASEDEIETLRKYGRAVGVLYQVVDDV 761 LDLEGGPNSVEFV EKK+GEMGECSAVCGGL+AGA +DEI+ LR+YGRAVGVLYQVVDD+ Sbjct: 178 LDLEGGPNSVEFVQEKKFGEMGECSAVCGGLLAGAKDDEIQRLRRYGRAVGVLYQVVDDI 237 Query: 760 LEEKMRSQNXXXXXXXXXXKSYVRVYGVEKAMQVAEDLRGRAKKALDSFDKYGERLLPLY 581 LE K KSYV +YGVEKA++VAE+LR +AK+ LD F+KYGE +LPLY Sbjct: 238 LEAKTMKSKVDEDKKKRKGKSYVALYGVEKAIEVAEELRAKAKEELDGFEKYGESVLPLY 297 Query: 580 SFVDYAADR 554 SFVDYAADR Sbjct: 298 SFVDYAADR 306 >gb|AEZ55680.1| geranyl diphosphate synthase small subunit type II.2 [Salvia miltiorrhiza] Length = 331 Score = 179 bits (455), Expect = 6e-43 Identities = 90/129 (69%), Positives = 107/129 (82%) Frame = -1 Query: 940 LDLEGGPNSVEFVLEKKYGEMGECSAVCGGLIAGASEDEIETLRKYGRAVGVLYQVVDDV 761 LDLEGGPN+V+ V EKK+GEMG+CSAVCGGL+AGAS+DEIE LRKYGRAVG+LY+VVDD+ Sbjct: 197 LDLEGGPNAVDLVQEKKFGEMGQCSAVCGGLLAGASDDEIEHLRKYGRAVGILYEVVDDI 256 Query: 760 LEEKMRSQNXXXXXXXXXXKSYVRVYGVEKAMQVAEDLRGRAKKALDSFDKYGERLLPLY 581 E K+ Q KSYV VYGVEKAM+VAEDLR +AKK L+S +KYG+++LPLY Sbjct: 257 RETKL--QPDEKDKSKSKGKSYVSVYGVEKAMEVAEDLRSQAKKELESLEKYGDKVLPLY 314 Query: 580 SFVDYAADR 554 SFVDYAADR Sbjct: 315 SFVDYAADR 323 >ref|XP_004144868.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Cucumis sativus] gi|449508802|ref|XP_004163415.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Cucumis sativus] Length = 335 Score = 177 bits (450), Expect = 2e-42 Identities = 85/129 (65%), Positives = 105/129 (81%) Frame = -1 Query: 940 LDLEGGPNSVEFVLEKKYGEMGECSAVCGGLIAGASEDEIETLRKYGRAVGVLYQVVDDV 761 LDLEGGPNSVEFV EKK+GEM +CSAVCGGL+AGA + EI+ LR+YGRAVGVLYQVVDD+ Sbjct: 199 LDLEGGPNSVEFVQEKKFGEMAQCSAVCGGLLAGAEDHEIQRLRRYGRAVGVLYQVVDDI 258 Query: 760 LEEKMRSQNXXXXXXXXXXKSYVRVYGVEKAMQVAEDLRGRAKKALDSFDKYGERLLPLY 581 LEE+ + + KSYV VYG+EKA +VAE+LR +AK L+ F+KYG++++PLY Sbjct: 259 LEEQSKKLDYTDESKRSKGKSYVEVYGIEKAKEVAEELRAKAKNELEGFEKYGDQVMPLY 318 Query: 580 SFVDYAADR 554 SFVDYAADR Sbjct: 319 SFVDYAADR 327 >ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] gi|223530713|gb|EEF32584.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] Length = 345 Score = 175 bits (443), Expect = 2e-41 Identities = 88/129 (68%), Positives = 103/129 (79%) Frame = -1 Query: 940 LDLEGGPNSVEFVLEKKYGEMGECSAVCGGLIAGASEDEIETLRKYGRAVGVLYQVVDDV 761 LDLEGGP+ VEF EKKYGEM ECSAVCGGL+AGA +DEI+ LR+YGRAVGVLYQV+DDV Sbjct: 211 LDLEGGPSFVEFAQEKKYGEMSECSAVCGGLLAGAEDDEIQRLRRYGRAVGVLYQVIDDV 270 Query: 760 LEEKMRSQNXXXXXXXXXXKSYVRVYGVEKAMQVAEDLRGRAKKALDSFDKYGERLLPLY 581 LE K + N KSYV +YG+EKAM+VAE+LR +AKK LD F KYG+ ++PLY Sbjct: 271 LEAK--AMNKENEEKRRNGKSYVSLYGIEKAMEVAEELRTQAKKELDGFAKYGDSVMPLY 328 Query: 580 SFVDYAADR 554 SFVDYAADR Sbjct: 329 SFVDYAADR 337 >dbj|BAF98303.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis] Length = 306 Score = 172 bits (436), Expect = 1e-40 Identities = 88/129 (68%), Positives = 103/129 (79%) Frame = -1 Query: 940 LDLEGGPNSVEFVLEKKYGEMGECSAVCGGLIAGASEDEIETLRKYGRAVGVLYQVVDDV 761 LDLEG NS EFV EKKYGEMGECSAVCGGL+AGA +DEI+ LR+YGRAVGVLY+V+DDV Sbjct: 171 LDLEGSLNSAEFVQEKKYGEMGECSAVCGGLLAGAEDDEIQRLRRYGRAVGVLYKVIDDV 230 Query: 760 LEEKMRSQNXXXXXXXXXXKSYVRVYGVEKAMQVAEDLRGRAKKALDSFDKYGERLLPLY 581 LE K S+ KSYV +YGVEKA++VAE+LR +AKK LD F+KYGE + PLY Sbjct: 231 LEAKSMSKE-DEENEKKKAKSYVSLYGVEKAVEVAEELRTKAKKELDGFEKYGESVQPLY 289 Query: 580 SFVDYAADR 554 +FVDYAADR Sbjct: 290 NFVDYAADR 298