BLASTX nr result

ID: Bupleurum21_contig00001193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001193
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36650.1| C3HL domain class transcription factor [Malus x d...   111   8e-23
ref|XP_002269430.1| PREDICTED: zinc finger CCCH domain-containin...   110   2e-22
emb|CAN68018.1| hypothetical protein VITISV_014472 [Vitis vinifera]   110   2e-22
ref|XP_002528295.1| transcription factor, putative [Ricinus comm...   106   3e-21
ref|XP_002316207.1| predicted protein [Populus trichocarpa] gi|2...   104   1e-20

>gb|ADL36650.1| C3HL domain class transcription factor [Malus x domestica]
          Length = 665

 Score =  111 bits (278), Expect = 8e-23
 Identities = 58/97 (59%), Positives = 69/97 (71%), Gaps = 2/97 (2%)
 Frame = +3

Query: 39  PNGRLDWGYQEDINNKLKKSASFGIGSGNAGARNSGMSPSLVDEPDVSWVNSLVKDVSSA 218
           P G+LDWG Q D  NKLKKSASFG  S NAG    G     V+EPDVSWVN+LV+DVSS 
Sbjct: 569 PGGKLDWGMQGDELNKLKKSASFGFRSNNAGP--PGFKTPAVEEPDVSWVNTLVRDVSSE 626

Query: 219 GAGLYSSD--QKHNKGGNGAHEMLSAWAEQMYIEQEQ 323
            + L+ +D  Q+++   NG HEML +WAEQMYIEQEQ
Sbjct: 627 RSELFGADKKQRYHHLNNGGHEMLPSWAEQMYIEQEQ 663


>ref|XP_002269430.1| PREDICTED: zinc finger CCCH domain-containing protein 29-like
           [Vitis vinifera]
          Length = 689

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/98 (59%), Positives = 65/98 (66%)
 Frame = +3

Query: 39  PNGRLDWGYQEDINNKLKKSASFGIGSGNAGARNSGMSPSLVDEPDVSWVNSLVKDVSSA 218
           P+G+LDWG Q D  NKLKKSASFG  + N       M  S  DEPDVSWVNSLVKDV + 
Sbjct: 595 PDGKLDWGIQGDELNKLKKSASFGFRTNNTATATQSMMAS-TDEPDVSWVNSLVKDVPAV 653

Query: 219 GAGLYSSDQKHNKGGNGAHEMLSAWAEQMYIEQEQMVA 332
            +GL+ S Q+    G G HE L  W EQMYIEQEQMVA
Sbjct: 654 SSGLFGSQQR--PYGIGVHEKLPPWVEQMYIEQEQMVA 689


>emb|CAN68018.1| hypothetical protein VITISV_014472 [Vitis vinifera]
          Length = 674

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/98 (59%), Positives = 65/98 (66%)
 Frame = +3

Query: 39  PNGRLDWGYQEDINNKLKKSASFGIGSGNAGARNSGMSPSLVDEPDVSWVNSLVKDVSSA 218
           P+G+LDWG Q D  NKLKKSASFG  + N       M  S  DEPDVSWVNSLVKDV + 
Sbjct: 580 PDGKLDWGIQGDELNKLKKSASFGFRTNNTATATQSMMAS-TDEPDVSWVNSLVKDVPAV 638

Query: 219 GAGLYSSDQKHNKGGNGAHEMLSAWAEQMYIEQEQMVA 332
            +GL+ S Q+    G G HE L  W EQMYIEQEQMVA
Sbjct: 639 SSGLFGSQQR--PYGIGVHEKLPPWVEQMYIEQEQMVA 674


>ref|XP_002528295.1| transcription factor, putative [Ricinus communis]
           gi|223532250|gb|EEF34053.1| transcription factor,
           putative [Ricinus communis]
          Length = 346

 Score =  106 bits (265), Expect = 3e-21
 Identities = 54/98 (55%), Positives = 67/98 (68%)
 Frame = +3

Query: 39  PNGRLDWGYQEDINNKLKKSASFGIGSGNAGARNSGMSPSLVDEPDVSWVNSLVKDVSSA 218
           P+G+LDWG Q D  NKLKKSASFG  S N     +  +   VDEPDVSWVN+LVKDV   
Sbjct: 250 PDGKLDWGVQGDELNKLKKSASFGFRSSNNPTMRTNFALPNVDEPDVSWVNTLVKDVPPV 309

Query: 219 GAGLYSSDQKHNKGGNGAHEMLSAWAEQMYIEQEQMVA 332
           G+ L+ ++++++  G G  E L  W EQMYIEQEQMVA
Sbjct: 310 GSSLFGAERQYSI-GKGVRESLPPWMEQMYIEQEQMVA 346


>ref|XP_002316207.1| predicted protein [Populus trichocarpa] gi|222865247|gb|EEF02378.1|
           predicted protein [Populus trichocarpa]
          Length = 612

 Score =  104 bits (260), Expect = 1e-20
 Identities = 56/99 (56%), Positives = 69/99 (69%), Gaps = 1/99 (1%)
 Frame = +3

Query: 39  PNGRLDWGYQEDINNKLKKSASFGIGSGNAGARNSG-MSPSLVDEPDVSWVNSLVKDVSS 215
           PNG+LDWG Q D  NKLKKSASFG  S N  A  +  ++ S VDEPDVSWVNSLVKDV  
Sbjct: 515 PNGKLDWGIQGDELNKLKKSASFGFRSNNNPATTAASLTASHVDEPDVSWVNSLVKDVPP 574

Query: 216 AGAGLYSSDQKHNKGGNGAHEMLSAWAEQMYIEQEQMVA 332
           AG+  + +++++++   G  E L  W EQMY EQEQMVA
Sbjct: 575 AGSTFFGAEKQYSR-REGVPESLPPWMEQMYREQEQMVA 612


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