BLASTX nr result

ID: Bupleurum21_contig00001177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001177
         (1040 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG29319.1| Beta transducin-like protein, putative [Solanum b...   490   e-136
ref|XP_002520011.1| conserved hypothetical protein [Ricinus comm...   488   e-135
ref|XP_002275116.1| PREDICTED: protein TOPLESS [Vitis vinifera] ...   484   e-134
ref|XP_002328986.1| predicted protein [Populus trichocarpa] gi|2...   468   e-129
ref|NP_001167872.2| ramosa 1 enhancer locus 2 [Zea mays] gi|3033...   467   e-129

>gb|ABG29319.1| Beta transducin-like protein, putative [Solanum bulbocastanum]
          Length = 600

 Score =  490 bits (1262), Expect = e-136
 Identities = 241/335 (71%), Positives = 281/335 (83%), Gaps = 4/335 (1%)
 Frame = -3

Query: 1038 SERNPSGKSTASIVPQLWQPSSGSLMSNDLSDSKTAEESAACIALSKNDSYVMSASGGKV 859
            +ERNPSGKS+A++VPQLWQP++G+LMSND+ D+K+AE++AACIALSKNDSYVMSASGGKV
Sbjct: 275  NERNPSGKSSAAVVPQLWQPTNGALMSNDVGDAKSAEDAAACIALSKNDSYVMSASGGKV 334

Query: 858  SLFNMMTFKVMTTFMXXXXXATYLAFHPQDNNIIAIGMEDSSIQIYNVRVDEVKIKLKGH 679
            SLFNMMTFKVMTTFM     ATYLAFHPQDNN+IA+GMEDS+IQIYNVRVDEVKIKLKGH
Sbjct: 335  SLFNMMTFKVMTTFMPPPPAATYLAFHPQDNNVIAVGMEDSTIQIYNVRVDEVKIKLKGH 394

Query: 678  QKAITGLAFSQSLNILVSSGADAQLCVWNIDGWEKRKARTIQTPPGHPSPLVGDTKVQFH 499
            QK ITGLAFSQSLN+L        LC+W++DGWEK+KAR IQ PPGH +PLVG+T+VQFH
Sbjct: 395  QKRITGLAFSQSLNVL--------LCIWSVDGWEKKKARPIQVPPGHQAPLVGETRVQFH 446

Query: 498  NDQSRLLVVHESQIGVYDSQLGCSCLWSPRDSLXXXXXXXIYSCDGLLVFAGFCDGAVGV 319
            NDQS +LVVHESQIG+YD+QL C   W PRDSL       IYSCDGLL+F GFCDGA+G+
Sbjct: 447  NDQSHILVVHESQIGIYDTQLECQRSWYPRDSLSAPISSAIYSCDGLLIFTGFCDGAIGI 506

Query: 318  FDAERLRLCCRIAPSAYIPPPVSSSNLDAYPVVIAAHPSDPNQFALGMTDGSVHVMEPSD 139
            FDA+ LRL CRIAPSAY+   + S +  A+PVVIAAHPSD NQFALGM+DG+VHV+EPSD
Sbjct: 507  FDADSLRLRCRIAPSAYL-SSIGSGSGAAFPVVIAAHPSDSNQFALGMSDGTVHVIEPSD 565

Query: 138  GENVWGGSLPLENGSTPSLPS----NSQPSTTPSR 46
             E  WGGS   +NG+ PS+PS    NSQPS TPSR
Sbjct: 566  AEPKWGGSSSQDNGAMPSIPSSSALNSQPSETPSR 600


>ref|XP_002520011.1| conserved hypothetical protein [Ricinus communis]
            gi|223540775|gb|EEF42335.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1137

 Score =  488 bits (1256), Expect = e-135
 Identities = 248/335 (74%), Positives = 276/335 (82%), Gaps = 4/335 (1%)
 Frame = -3

Query: 1038 SERNPSGKSTASIVPQLWQPSSGSLMSNDLSDSKTAEESAACIALSKNDSYVMSASGGKV 859
            SERNPSGK+TA + PQLWQP SG+LM+ND+SDSK AEESAACIALSKNDSYVMSASGGKV
Sbjct: 805  SERNPSGKATAYVAPQLWQPPSGTLMTNDISDSKPAEESAACIALSKNDSYVMSASGGKV 864

Query: 858  SLFNMMTFKVMTTFMXXXXXATYLAFHPQDNNIIAIGMEDSSIQIYNVRVDEVKIKLKGH 679
            SLFNMMTFKVMTTFM     AT+LAFHPQDNNIIAIGMEDSS+QIYNVRVDEVK KLKGH
Sbjct: 865  SLFNMMTFKVMTTFMSPPPAATFLAFHPQDNNIIAIGMEDSSVQIYNVRVDEVKTKLKGH 924

Query: 678  QKAITGLAFSQSLNILVSSGADAQLCVWNIDGWEKRKARTIQTPPGHPSPLVGDTKVQFH 499
            Q  ITGLAFSQSLN+LVSSGADAQLCVW+IDGWEK+K+R IQ PPG  SPL G+TKVQFH
Sbjct: 925  QNRITGLAFSQSLNVLVSSGADAQLCVWSIDGWEKKKSRFIQAPPGRQSPLAGETKVQFH 984

Query: 498  NDQSRLLVVHESQIGVYDSQLGCSCLWSPRDSLXXXXXXXIYSCDGLLVFAGFCDGAVGV 319
            NDQ+ LLVVHESQI +YDS+L C   W P+D+L       IYS DGLLV+ GFCDGAVGV
Sbjct: 985  NDQTHLLVVHESQIAIYDSKLECLRSWYPKDTLTAPIASAIYSSDGLLVYTGFCDGAVGV 1044

Query: 318  FDAERLRLCCRIAPSAYIPPPVSSSNLDAYPVVIAAHPSDPNQFALGMTDGSVHVMEPSD 139
            FDA+ LR+ CRIAPSAYIP  V+ +N  AYP+VIAAHPS+PNQ ALGM+DG+VHV+EPSD
Sbjct: 1045 FDADSLRVRCRIAPSAYIPSSVAGNN--AYPLVIAAHPSEPNQIALGMSDGAVHVVEPSD 1102

Query: 138  GENVWGGSLPLENGSTPSLPSN----SQPSTTPSR 46
             E  WGG    +NGS PS  SN     Q S  PSR
Sbjct: 1103 VELKWGGPSSQDNGSHPSNSSNPSLSGQQSEHPSR 1137


>ref|XP_002275116.1| PREDICTED: protein TOPLESS [Vitis vinifera]
            gi|297737353|emb|CBI26554.3| unnamed protein product
            [Vitis vinifera]
          Length = 1135

 Score =  484 bits (1246), Expect = e-134
 Identities = 247/335 (73%), Positives = 273/335 (81%), Gaps = 4/335 (1%)
 Frame = -3

Query: 1038 SERNPSGKSTASIVPQLWQPSSGSLMSNDLSDSKTAEESAACIALSKNDSYVMSASGGKV 859
            SERNP GKSTA +VPQLWQP++G+LM+ND  D+   EESAACIALSKNDSYVMSASGGKV
Sbjct: 803  SERNPLGKSTAYVVPQLWQPANGTLMTNDTGDNNPPEESAACIALSKNDSYVMSASGGKV 862

Query: 858  SLFNMMTFKVMTTFMXXXXXATYLAFHPQDNNIIAIGMEDSSIQIYNVRVDEVKIKLKGH 679
            SLFNMMTFKVMTTFM     AT+LAFHPQDNNIIAIGMEDS+IQIYNVRVDEVK KLKGH
Sbjct: 863  SLFNMMTFKVMTTFMSPPPAATFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGH 922

Query: 678  QKAITGLAFSQSLNILVSSGADAQLCVWNIDGWEKRKARTIQTPPGHPSPLVGDTKVQFH 499
            QK +TGLAFSQ LN LVSSGADAQLCVW+IDGWEKRK+R IQ P G  SPLVGDTKVQFH
Sbjct: 923  QKRVTGLAFSQILNCLVSSGADAQLCVWSIDGWEKRKSRFIQAPAGRSSPLVGDTKVQFH 982

Query: 498  NDQSRLLVVHESQIGVYDSQLGCSCLWSPRDSLXXXXXXXIYSCDGLLVFAGFCDGAVGV 319
            NDQ+ LLVVHESQI VYDS+L C   WSP+DSL       IYSCD +LV+AGF DGAVGV
Sbjct: 983  NDQAHLLVVHESQIAVYDSKLECVRSWSPKDSLPAPISSAIYSCDSMLVYAGFGDGAVGV 1042

Query: 318  FDAERLRLCCRIAPSAYIPPPVSSSNLDAYPVVIAAHPSDPNQFALGMTDGSVHVMEPSD 139
            FDA+ LRL CRIAPSAYIP P  SS +  YP+VIAAHPS+PNQ ALGM+DG+VHV+EP+D
Sbjct: 1043 FDADSLRLRCRIAPSAYIPSPALSSGV--YPLVIAAHPSEPNQIALGMSDGAVHVVEPTD 1100

Query: 138  GENVWGGSLPLENGSTPSLPSN----SQPSTTPSR 46
             E  WGG  P +NGS PS  SN     QP+  P R
Sbjct: 1101 TEPKWGGQPPQDNGSIPSNSSNPALSGQPTELPPR 1135


>ref|XP_002328986.1| predicted protein [Populus trichocarpa] gi|222839220|gb|EEE77571.1|
            predicted protein [Populus trichocarpa]
          Length = 1099

 Score =  468 bits (1203), Expect = e-129
 Identities = 234/321 (72%), Positives = 265/321 (82%)
 Frame = -3

Query: 1023 SGKSTASIVPQLWQPSSGSLMSNDLSDSKTAEESAACIALSKNDSYVMSASGGKVSLFNM 844
            +GK+TAS  PQLWQP SG+ M+ND+++SK AEESAACIALSKNDSYVMSASGGKVSLFNM
Sbjct: 772  AGKATASNAPQLWQPPSGTPMTNDINESKPAEESAACIALSKNDSYVMSASGGKVSLFNM 831

Query: 843  MTFKVMTTFMXXXXXATYLAFHPQDNNIIAIGMEDSSIQIYNVRVDEVKIKLKGHQKAIT 664
            MTFKVMTTFM     AT+LAFHPQDNNIIAIGMEDS++QIYNVRVDEVK KLKGHQ  IT
Sbjct: 832  MTFKVMTTFMSPPPAATFLAFHPQDNNIIAIGMEDSTVQIYNVRVDEVKTKLKGHQNRIT 891

Query: 663  GLAFSQSLNILVSSGADAQLCVWNIDGWEKRKARTIQTPPGHPSPLVGDTKVQFHNDQSR 484
            GLAFSQSLN+LVSSGADAQLCVW+IDGWEK+K R IQ PP   SPLVG+T+VQFHNDQ+ 
Sbjct: 892  GLAFSQSLNVLVSSGADAQLCVWSIDGWEKKKMRFIQAPPSRQSPLVGETRVQFHNDQAH 951

Query: 483  LLVVHESQIGVYDSQLGCSCLWSPRDSLXXXXXXXIYSCDGLLVFAGFCDGAVGVFDAER 304
            LLVVHESQI +YDS+L CS  WSP+D+L       IYS DG LV+ GFCDGAVGVFDA+ 
Sbjct: 952  LLVVHESQIAIYDSKLECSRSWSPKDTLAAPISSAIYSSDGFLVYTGFCDGAVGVFDADS 1011

Query: 303  LRLCCRIAPSAYIPPPVSSSNLDAYPVVIAAHPSDPNQFALGMTDGSVHVMEPSDGENVW 124
            LR+ CRIAPSAYIP   + S   AYP+VIAAHPS+PNQ ALGM+DG+VHV+EPSD E  W
Sbjct: 1012 LRIRCRIAPSAYIPSHPAGST--AYPLVIAAHPSEPNQIALGMSDGAVHVVEPSDVEMKW 1069

Query: 123  GGSLPLENGSTPSLPSNSQPS 61
            GG    +NG+ PS  SN  PS
Sbjct: 1070 GGPSSQDNGTHPSNTSNPSPS 1090


>ref|NP_001167872.2| ramosa 1 enhancer locus 2 [Zea mays] gi|303387473|gb|ADM15670.1|
            ramosa 1 enhancer locus 2 [Zea mays]
            gi|303387475|gb|ADM15671.1| ramosa 1 enhancer locus 2
            [Zea mays] gi|413917313|gb|AFW57245.1| ramosa1 enhancer
            locus2 [Zea mays]
          Length = 1141

 Score =  467 bits (1201), Expect = e-129
 Identities = 226/317 (71%), Positives = 262/317 (82%)
 Frame = -3

Query: 1038 SERNPSGKSTASIVPQLWQPSSGSLMSNDLSDSKTAEESAACIALSKNDSYVMSASGGKV 859
            S+RNPSGKSTAS+ P LWQP++G LM+ND +D    EE+ ACIALSKNDSYVMSASGGKV
Sbjct: 803  SDRNPSGKSTASVAPHLWQPANGILMTNDTNDGNP-EEATACIALSKNDSYVMSASGGKV 861

Query: 858  SLFNMMTFKVMTTFMXXXXXATYLAFHPQDNNIIAIGMEDSSIQIYNVRVDEVKIKLKGH 679
            SLFNMMTFKVMTTFM     AT+LAFHPQDNNIIAIGMEDS+IQIYNVR+D+VK KLKGH
Sbjct: 862  SLFNMMTFKVMTTFMAPPPAATFLAFHPQDNNIIAIGMEDSTIQIYNVRIDDVKSKLKGH 921

Query: 678  QKAITGLAFSQSLNILVSSGADAQLCVWNIDGWEKRKARTIQTPPGHPSPLVGDTKVQFH 499
            QK ITGLAFSQS+N+LVSSGADAQLCVW+IDGWEK+K+R IQ P   P  LVGDT+VQFH
Sbjct: 922  QKKITGLAFSQSMNVLVSSGADAQLCVWSIDGWEKKKSRYIQPPANRPGTLVGDTRVQFH 981

Query: 498  NDQSRLLVVHESQIGVYDSQLGCSCLWSPRDSLXXXXXXXIYSCDGLLVFAGFCDGAVGV 319
            NDQ+ LLVVHESQ+G+YD  L C  LWSPRD+L       IYSCDGLLV+AGFCDGA+GV
Sbjct: 982  NDQTHLLVVHESQLGIYDGNLDCLRLWSPRDALPAPISSAIYSCDGLLVYAGFCDGAIGV 1041

Query: 318  FDAERLRLCCRIAPSAYIPPPVSSSNLDAYPVVIAAHPSDPNQFALGMTDGSVHVMEPSD 139
            F+AE LRL CRIAPSAYIPP + +     YP+V+AAHP +PNQ A+GM+DG VHV+EP D
Sbjct: 1042 FEAESLRLRCRIAPSAYIPPSILACAGRVYPLVVAAHPMEPNQIAIGMSDGKVHVVEPLD 1101

Query: 138  GENVWGGSLPLENGSTP 88
            G+  WG + P +NG+ P
Sbjct: 1102 GDPKWGSAPPQDNGAHP 1118


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