BLASTX nr result

ID: Bupleurum21_contig00001174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001174
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306329.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
ref|XP_002309996.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_003537506.1| PREDICTED: uncharacterized protein LOC100816...    65   8e-09
ref|XP_002528989.1| conserved hypothetical protein [Ricinus comm...    64   1e-08
ref|XP_003552110.1| PREDICTED: uncharacterized protein LOC100786...    63   2e-08

>ref|XP_002306329.1| predicted protein [Populus trichocarpa] gi|222855778|gb|EEE93325.1|
           predicted protein [Populus trichocarpa]
          Length = 690

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 45/84 (53%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
 Frame = +2

Query: 11  EDRNIQPQNDDSNPPHEGANPNPIDLETQVFEVE-----KVTSDSICTDIVSINEKIELK 175
           ED   Q +N+ S PP E         + QV EV      +V SDSI TD VSINEKIELK
Sbjct: 199 EDSKPQLENESSKPPDENVVLESSAPDNQVSEVNPNLGFQVKSDSISTDSVSINEKIELK 258

Query: 176 DNMIVDDVKLEF-DVKHDREEPSS 244
           DN+I DDVKLE  DVK +  EPSS
Sbjct: 259 DNIIADDVKLELDDVKLEMVEPSS 282


>ref|XP_002309996.1| predicted protein [Populus trichocarpa] gi|222852899|gb|EEE90446.1|
           predicted protein [Populus trichocarpa]
          Length = 582

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 8/87 (9%)
 Frame = +2

Query: 5   KIEDRNIQPQ--NDDSNPPHEGANPNPIDLETQVFEVE-----KVTSDSICTDIVSINEK 163
           ++E+  ++PQ  N++  PP E A  +    + QV EV      +V SDSI TD VSINEK
Sbjct: 101 QLENEGLKPQLENENLKPPDEDATLDSSAPDNQVSEVSPSLGFQVKSDSISTDSVSINEK 160

Query: 164 IELKDNMIVDDVKLEFD-VKHDREEPS 241
           IELKDN+I D+VKLE D VK +  EPS
Sbjct: 161 IELKDNIIADNVKLELDNVKPEMVEPS 187


>ref|XP_003537506.1| PREDICTED: uncharacterized protein LOC100816245 [Glycine max]
          Length = 705

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 8/91 (8%)
 Frame = +2

Query: 5   KIEDRNIQPQND-DSNPPHEGANPNPIDLETQVFEVE-----KVTSDSICTDIVSINEKI 166
           +++  + +PQ D D+ P HE   P+    E QV EV      +V SDSI TD +SIN+K 
Sbjct: 220 QLDGEDSKPQLDYDTKPLHEDPVPDSAVPENQVSEVNPSLGSQVKSDSISTDSLSINQKN 279

Query: 167 ELKDNMIVDDVKLEFDVKHDR--EEPSSRDD 253
           ELKD +I D+VKLE D+      EEPSSR+D
Sbjct: 280 ELKDTIITDNVKLEQDIVKPEMVEEPSSRND 310


>ref|XP_002528989.1| conserved hypothetical protein [Ricinus communis]
           gi|223531579|gb|EEF33408.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 661

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
 Frame = +2

Query: 11  EDRNIQPQNDDSNPPHEGANPNPIDLETQVFEVE-----KVTSDSICTDIVSINEKIELK 175
           ED     +N+    PHE    +      QV EV      +V SDSI TD VSINEK ELK
Sbjct: 240 EDPKPLLENEGLRSPHEDVMHDSSTPNNQVSEVSPNLGFQVKSDSISTDSVSINEKTELK 299

Query: 176 DNMIVDDVKLEFDVKHDREEPSSRD 250
           DN+I D+VKLE DVK +  E SS +
Sbjct: 300 DNIITDNVKLELDVKPEMVEESSNN 324


>ref|XP_003552110.1| PREDICTED: uncharacterized protein LOC100786288 [Glycine max]
          Length = 708

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 8/91 (8%)
 Frame = +2

Query: 5   KIEDRNIQPQND-DSNPPHEGANPNPIDLETQVFEVE-----KVTSDSICTDIVSINEKI 166
           +++  + +PQ D D  P HE   P+    E QV EV      +V SDSI TD +SIN+K 
Sbjct: 221 QLDGEDSKPQLDCDIKPLHEDPVPDSSVPENQVSEVNPSLGSQVKSDSISTDSLSINQKN 280

Query: 167 ELKDNMIVDDVKLEFDVKHDR--EEPSSRDD 253
           ELKD +I D+VKLE D+      EEPSSR+D
Sbjct: 281 ELKDTIITDNVKLEQDIVKPEMVEEPSSRND 311


Top