BLASTX nr result

ID: Bupleurum21_contig00001164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001164
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADK35887.1| geranylgeranyl reductase [Sesamum indicum]             154   7e-36
sp|Q9ZS34.1|CHLP_TOBAC RecName: Full=Geranylgeranyl diphosphate ...   153   1e-35
ref|XP_002284906.1| PREDICTED: geranylgeranyl diphosphate reduct...   151   5e-35
ref|XP_003524776.1| PREDICTED: geranylgeranyl diphosphate reduct...   149   2e-34
gb|AAD28640.2| geranylgeranyl hydrogenase [Glycine max]               149   2e-34

>gb|ADK35887.1| geranylgeranyl reductase [Sesamum indicum]
          Length = 465

 Score =  154 bits (389), Expect = 7e-36
 Identities = 82/119 (68%), Positives = 90/119 (75%), Gaps = 4/119 (3%)
 Frame = +3

Query: 12  ASIALKTFVGLRHTSPETT-VQSHRP---TTLTYRPLRISAGKFSPKVTGRNLRXXXXXX 179
           ASIALKTFVGLR ++PE   +   +P   TTL YR LR++A K SP+VTGRNLR      
Sbjct: 2   ASIALKTFVGLRQSTPENNAIVLSKPIATTTLPYRRLRVNASKSSPRVTGRNLRVAVVGG 61

Query: 180 XXXXXXXXEILAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKM 356
                   E LAKGGIETFLIERK+DNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKM
Sbjct: 62  GPAGGAAAETLAKGGIETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKM 120


>sp|Q9ZS34.1|CHLP_TOBAC RecName: Full=Geranylgeranyl diphosphate reductase, chloroplastic;
           AltName: Full=Geranylgeranyl reductase; Flags: Precursor
           gi|3821254|emb|CAA07683.1| geranylgeranyl reductase
           [Nicotiana tabacum]
          Length = 464

 Score =  153 bits (387), Expect = 1e-35
 Identities = 81/118 (68%), Positives = 87/118 (73%), Gaps = 3/118 (2%)
 Frame = +3

Query: 12  ASIALKTFVGLRHTSPET---TVQSHRPTTLTYRPLRISAGKFSPKVTGRNLRXXXXXXX 182
           ASIALKTF GLR +SPE    T+    P T T+R LRI+A K SP+V GRNLR       
Sbjct: 2   ASIALKTFTGLRQSSPENNSITLSKSLPFTQTHRRLRINASKSSPRVNGRNLRVAVVGGG 61

Query: 183 XXXXXXXEILAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKM 356
                  E LAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDR+VTKMKM
Sbjct: 62  PAGGAAAETLAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKM 119


>ref|XP_002284906.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic
           [Vitis vinifera]
          Length = 467

 Score =  151 bits (382), Expect = 5e-35
 Identities = 82/121 (67%), Positives = 86/121 (71%), Gaps = 6/121 (4%)
 Frame = +3

Query: 12  ASIALKTFVGLRHTSPETTVQSH------RPTTLTYRPLRISAGKFSPKVTGRNLRXXXX 173
           ASI+LKTFVGLR +S +T    H       P     R LRI AGKFSPKVTGRNLR    
Sbjct: 2   ASISLKTFVGLRQSSSDTYNSGHVFPVKHLPAQPASRGLRIVAGKFSPKVTGRNLRVAVV 61

Query: 174 XXXXXXXXXXEILAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMK 353
                     E LAKGGIETFLIERK+DNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMK
Sbjct: 62  GGGPAGGSAAETLAKGGIETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMK 121

Query: 354 M 356
           M
Sbjct: 122 M 122


>ref|XP_003524776.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like
           [Glycine max]
          Length = 462

 Score =  149 bits (376), Expect = 2e-34
 Identities = 77/115 (66%), Positives = 85/115 (73%), Gaps = 1/115 (0%)
 Frame = +3

Query: 15  SIALKTFVGLRHTSPETTVQSHRPTTLT-YRPLRISAGKFSPKVTGRNLRXXXXXXXXXX 191
           SIA K+FVGLR +SPE    + +P   T +R  R+ AGKFSPK+ GRNLR          
Sbjct: 3   SIAFKSFVGLRQSSPEAPHFAAQPRPATPHRKFRVLAGKFSPKLNGRNLRVAVVGGGPAG 62

Query: 192 XXXXEILAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKM 356
               E LAKGG+ETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKM
Sbjct: 63  GAAAETLAKGGVETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKM 117


>gb|AAD28640.2| geranylgeranyl hydrogenase [Glycine max]
          Length = 462

 Score =  149 bits (376), Expect = 2e-34
 Identities = 77/115 (66%), Positives = 85/115 (73%), Gaps = 1/115 (0%)
 Frame = +3

Query: 15  SIALKTFVGLRHTSPETTVQSHRPTTLT-YRPLRISAGKFSPKVTGRNLRXXXXXXXXXX 191
           SIA K+FVGLR +SPE    + +P   T +R  R+ AGKFSPK+ GRNLR          
Sbjct: 3   SIAFKSFVGLRQSSPEAPHFAAQPRPATPHRKFRVLAGKFSPKLNGRNLRVAVVGGGPAG 62

Query: 192 XXXXEILAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKM 356
               E LAKGG+ETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKM
Sbjct: 63  GAAAETLAKGGVETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKM 117


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