BLASTX nr result

ID: Bupleurum21_contig00001157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001157
         (853 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603496.1| 60S acidic ribosomal protein p0 [Medicago tr...   430   e-118
ref|XP_002268645.1| PREDICTED: 60S acidic ribosomal protein P0 [...   429   e-118
gb|AFK39880.1| unknown [Medicago truncatula]                          429   e-118
gb|ACJ84880.1| unknown [Medicago truncatula]                          426   e-117
ref|XP_003616595.1| 60S acidic ribosomal protein p0 [Medicago tr...   426   e-117

>ref|XP_003603496.1| 60S acidic ribosomal protein p0 [Medicago truncatula]
           gi|355492544|gb|AES73747.1| 60S acidic ribosomal protein
           p0 [Medicago truncatula]
          Length = 323

 Score =  430 bits (1106), Expect = e-118
 Identities = 221/251 (88%), Positives = 232/251 (92%)
 Frame = +3

Query: 3   EYTQILVAAADNVGSKQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHAEKTGNEAFLNIIP 182
           EYTQILV  ADNVGSKQLQNIR+GLRGDSVVLMGKNTMMKRSVR+HAEKTGN AFLN+IP
Sbjct: 24  EYTQILVVNADNVGSKQLQNIRQGLRGDSVVLMGKNTMMKRSVRMHAEKTGNNAFLNLIP 83

Query: 183 LLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARXXXXXXXXXXXXXGNTGLDPSQTSFFQV 362
           LLVGNVGLIFTKGDLKEVSEEVAKYKVGAPAR             GNTGLDPSQTSFFQV
Sbjct: 84  LLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQV 143

Query: 363 LNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGTVFS 542
           LNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNG+VFS
Sbjct: 144 LNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFS 203

Query: 543 PEVLDMTEDDLVAKFAVGVSMVTSLSLALSYPTLAAAPHMFINAYKNVLAIALETEYSFP 722
           PEVLD+TEDDLVAKFA+GVSMVTSLSLA+SYPTLAAAPHMF+NAYKNVLA A+ TEYSFP
Sbjct: 204 PEVLDLTEDDLVAKFAIGVSMVTSLSLAISYPTLAAAPHMFVNAYKNVLAFAVATEYSFP 263

Query: 723 QAEKVKEYLAD 755
           +A+KVKEYL D
Sbjct: 264 EADKVKEYLKD 274


>ref|XP_002268645.1| PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]
          Length = 320

 Score =  429 bits (1103), Expect = e-118
 Identities = 219/251 (87%), Positives = 232/251 (92%)
 Frame = +3

Query: 3   EYTQILVAAADNVGSKQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHAEKTGNEAFLNIIP 182
           EY+QIL+AAADNVGS QLQNIRKGLRGDSVVLMGKNTMMKRS+R+HAEKTGN AFLN+IP
Sbjct: 24  EYSQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSIRLHAEKTGNTAFLNLIP 83

Query: 183 LLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARXXXXXXXXXXXXXGNTGLDPSQTSFFQV 362
           LLVGNVGLIFTKGDLKEVSEEVAKYKVGAPAR             GNTGLDPSQTSFFQV
Sbjct: 84  LLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVPPGNTGLDPSQTSFFQV 143

Query: 363 LNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGTVFS 542
           LNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNG+VFS
Sbjct: 144 LNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFS 203

Query: 543 PEVLDMTEDDLVAKFAVGVSMVTSLSLALSYPTLAAAPHMFINAYKNVLAIALETEYSFP 722
           PEVLD+TE+DL+ KFA GVSMVTSLSLA+SYPTLAAAPHMFINAYKNVLA+A+ TEYSFP
Sbjct: 204 PEVLDLTEEDLIEKFAAGVSMVTSLSLAISYPTLAAAPHMFINAYKNVLAVAVATEYSFP 263

Query: 723 QAEKVKEYLAD 755
           QA+KVKEYL D
Sbjct: 264 QADKVKEYLKD 274


>gb|AFK39880.1| unknown [Medicago truncatula]
          Length = 323

 Score =  429 bits (1102), Expect = e-118
 Identities = 220/251 (87%), Positives = 231/251 (92%)
 Frame = +3

Query: 3   EYTQILVAAADNVGSKQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHAEKTGNEAFLNIIP 182
           EYTQILV  ADNVGSKQLQNIR+GLRGDSVVLMGKNTMMKRSVR+HAEKTGN AFLN+IP
Sbjct: 24  EYTQILVVNADNVGSKQLQNIRQGLRGDSVVLMGKNTMMKRSVRMHAEKTGNNAFLNLIP 83

Query: 183 LLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARXXXXXXXXXXXXXGNTGLDPSQTSFFQV 362
           LLVGNVGLIFTKGDLKEVSEEVAKYKVGAPAR             GNTGLDPSQTSFFQV
Sbjct: 84  LLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQV 143

Query: 363 LNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGTVFS 542
           LNIPTKINKGT EIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNG+VFS
Sbjct: 144 LNIPTKINKGTAEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFS 203

Query: 543 PEVLDMTEDDLVAKFAVGVSMVTSLSLALSYPTLAAAPHMFINAYKNVLAIALETEYSFP 722
           PEVLD+TEDDLVAKFA+GVSMVTSLSLA+SYPTLAAAPHMF+NAYKNVLA A+ TEYSFP
Sbjct: 204 PEVLDLTEDDLVAKFAIGVSMVTSLSLAISYPTLAAAPHMFVNAYKNVLAFAVATEYSFP 263

Query: 723 QAEKVKEYLAD 755
           +A+KVKEYL D
Sbjct: 264 EADKVKEYLKD 274


>gb|ACJ84880.1| unknown [Medicago truncatula]
          Length = 323

 Score =  426 bits (1096), Expect = e-117
 Identities = 219/251 (87%), Positives = 230/251 (91%)
 Frame = +3

Query: 3   EYTQILVAAADNVGSKQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHAEKTGNEAFLNIIP 182
           EYTQILV  ADNVGSKQLQNIR+GLRGDSVVLMGKNTMMKRSVR+HAEKTGN AFLN+IP
Sbjct: 24  EYTQILVVNADNVGSKQLQNIRQGLRGDSVVLMGKNTMMKRSVRMHAEKTGNNAFLNLIP 83

Query: 183 LLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARXXXXXXXXXXXXXGNTGLDPSQTSFFQV 362
           LLVGNVGLIFTKGDLKEVSEEVAKYKVGAPAR             GNTGLDPSQTSFFQV
Sbjct: 84  LLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQV 143

Query: 363 LNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGTVFS 542
           LNIPTKINKGT EIITPVELIKKGDKVGSSEAALLAKLGI PFSYGLVVLSVYDNG+VFS
Sbjct: 144 LNIPTKINKGTAEIITPVELIKKGDKVGSSEAALLAKLGITPFSYGLVVLSVYDNGSVFS 203

Query: 543 PEVLDMTEDDLVAKFAVGVSMVTSLSLALSYPTLAAAPHMFINAYKNVLAIALETEYSFP 722
           PEVLD+TEDDLVAKFA+GVSMVTSLSLA+SYPTLAAAPHMF+NAYKNVLA A+ TEYSFP
Sbjct: 204 PEVLDLTEDDLVAKFAIGVSMVTSLSLAISYPTLAAAPHMFVNAYKNVLAFAVATEYSFP 263

Query: 723 QAEKVKEYLAD 755
           +A+KVKEYL D
Sbjct: 264 EADKVKEYLKD 274


>ref|XP_003616595.1| 60S acidic ribosomal protein p0 [Medicago truncatula]
           gi|355517930|gb|AES99553.1| 60S acidic ribosomal protein
           p0 [Medicago truncatula]
          Length = 323

 Score =  426 bits (1094), Expect = e-117
 Identities = 217/251 (86%), Positives = 232/251 (92%)
 Frame = +3

Query: 3   EYTQILVAAADNVGSKQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHAEKTGNEAFLNIIP 182
           E+TQIL+  ADNVGSKQLQNIR GLRGDSVVLMGKNTMMKRSVR+HAEKTGN AFLN+IP
Sbjct: 24  EFTQILIVNADNVGSKQLQNIRGGLRGDSVVLMGKNTMMKRSVRMHAEKTGNNAFLNLIP 83

Query: 183 LLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARXXXXXXXXXXXXXGNTGLDPSQTSFFQV 362
           LLVGNVGLIFTKGDLKEVSEEVAKYKVGAPAR             GNTGLDPSQTSFFQV
Sbjct: 84  LLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQV 143

Query: 363 LNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGTVFS 542
           LNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNG+VF+
Sbjct: 144 LNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFN 203

Query: 543 PEVLDMTEDDLVAKFAVGVSMVTSLSLALSYPTLAAAPHMFINAYKNVLAIALETEYSFP 722
           PEVLD+TEDDLVAKFA+GVSMVTSLSLA+SYPTLAAAPHMF+NAYKNVLA+A+ TEYSFP
Sbjct: 204 PEVLDLTEDDLVAKFAIGVSMVTSLSLAISYPTLAAAPHMFVNAYKNVLAVAVATEYSFP 263

Query: 723 QAEKVKEYLAD 755
           +A+KVKE+L D
Sbjct: 264 EADKVKEFLKD 274


Top