BLASTX nr result

ID: Bupleurum21_contig00001155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001155
         (1236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300081.1| predicted protein [Populus trichocarpa] gi|2...   578   e-162
emb|CBI17696.3| unnamed protein product [Vitis vinifera]              555   e-156
ref|XP_002270991.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   555   e-156
ref|XP_002526930.1| ubiquitin-protein ligase, putative [Ricinus ...   549   e-154
gb|ADN34072.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]    525   e-146

>ref|XP_002300081.1| predicted protein [Populus trichocarpa] gi|222847339|gb|EEE84886.1|
            predicted protein [Populus trichocarpa]
          Length = 915

 Score =  578 bits (1490), Expect = e-162
 Identities = 279/413 (67%), Positives = 327/413 (79%), Gaps = 3/413 (0%)
 Frame = +2

Query: 2    PRGSTVSLAVKSVNELAATPAYHWDALVYEAVIDRDNTTIVFVKGLNLRSGRVENASRYE 181
            PRG TVSLA+KS   +   P + WD+LVYEA+IDRDNTT+VFVKGLNLR  ++ NASR+E
Sbjct: 142  PRGYTVSLALKSGGYIHPGPTHKWDSLVYEALIDRDNTTVVFVKGLNLRPEKLSNASRFE 201

Query: 182  CVFGWDFRRQKFLLSSEVVSVAQEIVRCKTPLXXXXXXXXXXXXXXXXXXXXXGRGIFRS 361
            CV+GWDFRR KFLL S+V+S+AQEIVRCKTPL                     GRG   S
Sbjct: 202  CVYGWDFRRPKFLLRSQVISMAQEIVRCKTPLSVLGAPQMVNSSIKASIRVK-GRGTLHS 260

Query: 362  VARPEWRIRPNP--LAHKLHQMCVCTMLRNQARFLKEWVIYNSWVGVQRWFIYDNNSDDD 535
            +ARP  R +P P     K H+MC+CTMLRNQARFL+EWV+Y++ VGVQ W+IYDNNSDDD
Sbjct: 261  IARPGLRSKPQPGPPERKPHEMCICTMLRNQARFLREWVMYHAQVGVQSWYIYDNNSDDD 320

Query: 536  IEKVIELLVKSNHNISRHVWPWIKSQEAGFAHCALRARDSCEWVGFIDVDEFLHFPGDLS 715
            IE V+E LV++  NISRHVWPWIK+QEAGFAHCALRAR+SCEWVGFIDVDEF + P  LS
Sbjct: 321  IEDVMESLVQAGFNISRHVWPWIKTQEAGFAHCALRARESCEWVGFIDVDEFFYSPLGLS 380

Query: 716  LHNVLNNYSGP-SEVAELRSSCYSFGPSGLKHMHVKGVMVGYTCRLAVPERHKSIVKTEA 892
            LH+V++N SG  + VAE+R+SCYSFGPSGLKH+  +GVMVGYTCRL  PERHKSIVK EA
Sbjct: 381  LHDVISNQSGSGNNVAEIRTSCYSFGPSGLKHLPPQGVMVGYTCRLGAPERHKSIVKPEA 440

Query: 893  LNSSLINVVHHFHLSDGYKYVNMNRSVMVINHYKYQVWEVFKEKFYRRVATYVFDWQQAK 1072
            LNS+LINVVHHFHLS+G++YVN +R V+ INHYKYQVWEVFKEKFYRRVATYV DWQ  +
Sbjct: 441  LNSTLINVVHHFHLSEGFRYVNADRGVLAINHYKYQVWEVFKEKFYRRVATYVADWQNEQ 500

Query: 1073 NVESRDRVRGLGTQAIEPPDWSSRFCEVHDTDLKQKVLDTFSDPKTGMLPWQE 1231
            NV S+DR  GLGT+A+EPPDWSSRFCEV DT L+  VL  F DP T  LPW+E
Sbjct: 501  NVGSKDRAPGLGTRAVEPPDWSSRFCEVTDTGLRNLVLQKFMDPLTNHLPWEE 553


>emb|CBI17696.3| unnamed protein product [Vitis vinifera]
          Length = 1019

 Score =  555 bits (1430), Expect = e-156
 Identities = 264/412 (64%), Positives = 318/412 (77%), Gaps = 2/412 (0%)
 Frame = +2

Query: 2    PRGSTVSLAVKSVNELAATPAYHWDALVYEAVIDRDNTTIVFVKGLNLRSGRVENASRYE 181
            PRG T+SL +KS   L   P + WD+LVYEA+IDRDNTT+ FVKGLNLR  R  + +R+E
Sbjct: 170  PRGFTLSLVLKSNALLRPGPTHQWDSLVYEALIDRDNTTVAFVKGLNLRPDRASDPTRFE 229

Query: 182  CVFGWDFRRQKFLLSSEVVSVAQEIVRCKTPLXXXXXXXXXXXXXXXXXXXXXGRGIFRS 361
            CV+GWDFR+ +FLL SEVVS+AQE+VRC+TPL                     G+GI  S
Sbjct: 230  CVYGWDFRKPRFLLRSEVVSIAQEVVRCRTPLSILNNPQRLNSTIKVSVRMK-GKGILNS 288

Query: 362  VARPEWRIRPNPLAHKLHQMCVCTMLRNQARFLKEWVIYNSWVGVQRWFIYDNNSDDDIE 541
            +A P+ R  P+P   K H+MC+CTM+RNQARFL+EW++Y++ +GVQRWFIYDNNS D+IE
Sbjct: 289  IAEPKRRSPPDPPIRKQHEMCICTMVRNQARFLREWIMYHAQIGVQRWFIYDNNSVDNIE 348

Query: 542  KVIELLVKSNHNISRHVWPWIKSQEAGFAHCALRARDSCEWVGFIDVDEFLHFPGDLSLH 721
            KV+E L  +N NISRH+WPWIK+QEAGFAHCALRARDSCEWVGFIDVDEFLH P   SL 
Sbjct: 349  KVLESLETANLNISRHLWPWIKTQEAGFAHCALRARDSCEWVGFIDVDEFLHLPSGASLQ 408

Query: 722  NVLNNYS--GPSEVAELRSSCYSFGPSGLKHMHVKGVMVGYTCRLAVPERHKSIVKTEAL 895
            +V+ N S    + VAELR SCYSFGPSGL  +  KGV VGYTCRL+ PERHKSIV+ EAL
Sbjct: 409  DVVWNQSRSANNNVAELRISCYSFGPSGLTSVPPKGVAVGYTCRLSAPERHKSIVRPEAL 468

Query: 896  NSSLINVVHHFHLSDGYKYVNMNRSVMVINHYKYQVWEVFKEKFYRRVATYVFDWQQAKN 1075
            NS+LINVVHHFHL +G+ +VN++R  MVINHYKYQVWEVFKEKFYRRVA YV DWQ  +N
Sbjct: 469  NSTLINVVHHFHLRNGFDFVNVDRGAMVINHYKYQVWEVFKEKFYRRVAAYVADWQDEEN 528

Query: 1076 VESRDRVRGLGTQAIEPPDWSSRFCEVHDTDLKQKVLDTFSDPKTGMLPWQE 1231
            V S+DR  GLGT+A+EPPDWS+RFCEV DT L+ +VL  F DP+T  +PWQE
Sbjct: 529  VGSKDRAPGLGTRAVEPPDWSTRFCEVTDTGLRDRVLQIFKDPETHRMPWQE 580


>ref|XP_002270991.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Vitis vinifera]
          Length = 908

 Score =  555 bits (1430), Expect = e-156
 Identities = 264/412 (64%), Positives = 318/412 (77%), Gaps = 2/412 (0%)
 Frame = +2

Query: 2    PRGSTVSLAVKSVNELAATPAYHWDALVYEAVIDRDNTTIVFVKGLNLRSGRVENASRYE 181
            PRG T+SL +KS   L   P + WD+LVYEA+IDRDNTT+ FVKGLNLR  R  + +R+E
Sbjct: 137  PRGFTLSLVLKSNALLRPGPTHQWDSLVYEALIDRDNTTVAFVKGLNLRPDRASDPTRFE 196

Query: 182  CVFGWDFRRQKFLLSSEVVSVAQEIVRCKTPLXXXXXXXXXXXXXXXXXXXXXGRGIFRS 361
            CV+GWDFR+ +FLL SEVVS+AQE+VRC+TPL                     G+GI  S
Sbjct: 197  CVYGWDFRKPRFLLRSEVVSIAQEVVRCRTPLSILNNPQRLNSTIKVSVRMK-GKGILNS 255

Query: 362  VARPEWRIRPNPLAHKLHQMCVCTMLRNQARFLKEWVIYNSWVGVQRWFIYDNNSDDDIE 541
            +A P+ R  P+P   K H+MC+CTM+RNQARFL+EW++Y++ +GVQRWFIYDNNS D+IE
Sbjct: 256  IAEPKRRSPPDPPIRKQHEMCICTMVRNQARFLREWIMYHAQIGVQRWFIYDNNSVDNIE 315

Query: 542  KVIELLVKSNHNISRHVWPWIKSQEAGFAHCALRARDSCEWVGFIDVDEFLHFPGDLSLH 721
            KV+E L  +N NISRH+WPWIK+QEAGFAHCALRARDSCEWVGFIDVDEFLH P   SL 
Sbjct: 316  KVLESLETANLNISRHLWPWIKTQEAGFAHCALRARDSCEWVGFIDVDEFLHLPSGASLQ 375

Query: 722  NVLNNYS--GPSEVAELRSSCYSFGPSGLKHMHVKGVMVGYTCRLAVPERHKSIVKTEAL 895
            +V+ N S    + VAELR SCYSFGPSGL  +  KGV VGYTCRL+ PERHKSIV+ EAL
Sbjct: 376  DVVWNQSRSANNNVAELRISCYSFGPSGLTSVPPKGVAVGYTCRLSAPERHKSIVRPEAL 435

Query: 896  NSSLINVVHHFHLSDGYKYVNMNRSVMVINHYKYQVWEVFKEKFYRRVATYVFDWQQAKN 1075
            NS+LINVVHHFHL +G+ +VN++R  MVINHYKYQVWEVFKEKFYRRVA YV DWQ  +N
Sbjct: 436  NSTLINVVHHFHLRNGFDFVNVDRGAMVINHYKYQVWEVFKEKFYRRVAAYVADWQDEEN 495

Query: 1076 VESRDRVRGLGTQAIEPPDWSSRFCEVHDTDLKQKVLDTFSDPKTGMLPWQE 1231
            V S+DR  GLGT+A+EPPDWS+RFCEV DT L+ +VL  F DP+T  +PWQE
Sbjct: 496  VGSKDRAPGLGTRAVEPPDWSTRFCEVTDTGLRDRVLQIFKDPETHRMPWQE 547


>ref|XP_002526930.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|325530316|sp|B9SLR1.1|Y231_RICCO RecName: Full=UPF0392
            protein RCOM_0530710 gi|223533682|gb|EEF35417.1|
            ubiquitin-protein ligase, putative [Ricinus communis]
          Length = 552

 Score =  549 bits (1414), Expect = e-154
 Identities = 260/415 (62%), Positives = 318/415 (76%), Gaps = 6/415 (1%)
 Frame = +2

Query: 2    PRGSTVSLAVKSVNE-LAATPAYHWDALVYEAVIDRDNTTIVFVKGLNLRSGRVENASRY 178
            PRG +VSL +KS    +   P + WD+LVYEA+IDRDNTT+VFVKG NLR+ R+ NAS++
Sbjct: 138  PRGFSVSLELKSGGGYINPGPTHRWDSLVYEAMIDRDNTTVVFVKGFNLRADRIYNASKF 197

Query: 179  ECVFGWDFRRQKFLLSSEVVSVAQEIVRCKTPLXXXXXXXXXXXXXXXXXXXXXGRGIFR 358
            ECV+GWDFR+ KF+L S V+S+AQEIVRC+TPL                     G+G   
Sbjct: 198  ECVYGWDFRKTKFVLRSNVISIAQEIVRCQTPLSILNNQLKVNNAIKVSIRLK-GKGTLH 256

Query: 359  SVARPEWRIRPNP----LAHKLHQMCVCTMLRNQARFLKEWVIYNSWVGVQRWFIYDNNS 526
            S+ARP  ++  +P       K H+MC+CTMLRNQ RFLKEWV+Y+S +GV+RWFIYDNNS
Sbjct: 257  SIARPGVQLLTDPEPGLRGEKPHEMCICTMLRNQGRFLKEWVMYHSQIGVERWFIYDNNS 316

Query: 527  DDDIEKVIELLVKSNHNISRHVWPWIKSQEAGFAHCALRARDSCEWVGFIDVDEFLHFPG 706
            +DDI+ VIE L+ +  NISRHVWPW+K+QEAGFAHCALRAR  CEWVGFIDVDEF H P 
Sbjct: 317  EDDIDSVIESLIDAKFNISRHVWPWVKAQEAGFAHCALRARGLCEWVGFIDVDEFFHLPT 376

Query: 707  DLSLHNVLNNYSGP-SEVAELRSSCYSFGPSGLKHMHVKGVMVGYTCRLAVPERHKSIVK 883
             L+L + + N S   + VAELR SC+SFGPSGLKH+  +GV VGYTCR+ +PERHKSIVK
Sbjct: 377  GLNLQDAVKNQSNSGNNVAELRVSCHSFGPSGLKHVPAQGVTVGYTCRMMLPERHKSIVK 436

Query: 884  TEALNSSLINVVHHFHLSDGYKYVNMNRSVMVINHYKYQVWEVFKEKFYRRVATYVFDWQ 1063
             EALNS+LINVVHHFHL DG++YVN ++ ++VINHYKYQVWEVFKEKFYRRVATYV DWQ
Sbjct: 437  PEALNSTLINVVHHFHLRDGFRYVNADKGILVINHYKYQVWEVFKEKFYRRVATYVVDWQ 496

Query: 1064 QAKNVESRDRVRGLGTQAIEPPDWSSRFCEVHDTDLKQKVLDTFSDPKTGMLPWQ 1228
              +NV S+DR  GLGT+A+EPPDWSSRFCEV DT L+ ++L  F DP T +LPWQ
Sbjct: 497  NEQNVGSKDRAPGLGTRAVEPPDWSSRFCEVSDTGLRDRILQNFLDPLTDLLPWQ 551


>gb|ADN34072.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]
          Length = 555

 Score =  525 bits (1351), Expect = e-146
 Identities = 253/410 (61%), Positives = 304/410 (74%)
 Frame = +2

Query: 2    PRGSTVSLAVKSVNELAATPAYHWDALVYEAVIDRDNTTIVFVKGLNLRSGRVENASRYE 181
            P G TVS+ V+S  +L    ++ WD LVYEA++DRDNTT+VF+KGL LR  RV NAS++E
Sbjct: 130  PPGFTVSIRVRSNPQLQGGNSHQWDFLVYEALVDRDNTTVVFIKGLGLRPERVSNASKFE 189

Query: 182  CVFGWDFRRQKFLLSSEVVSVAQEIVRCKTPLXXXXXXXXXXXXXXXXXXXXXGRGIFRS 361
            CV+GWDFR+ KFLL S V+S+AQEI RC TPL                     G G   S
Sbjct: 190  CVYGWDFRKIKFLLRSNVISIAQEIARCTTPLSVLSNPNRTHDSIKVSIRVKGG-GTLNS 248

Query: 362  VARPEWRIRPNPLAHKLHQMCVCTMLRNQARFLKEWVIYNSWVGVQRWFIYDNNSDDDIE 541
            +ARP    R      K ++MC+CTMLRNQA+FLKEWVIY++ +GV+RWF+YDNNSDDDIE
Sbjct: 249  IARPLLSPRLITPHRKPYEMCLCTMLRNQAQFLKEWVIYHAHLGVRRWFVYDNNSDDDIE 308

Query: 542  KVIELLVKSNHNISRHVWPWIKSQEAGFAHCALRARDSCEWVGFIDVDEFLHFPGDLSLH 721
             VI  +    HNISRH+WPWIK+QEAGFAHCALRAR+SC+WVGFIDVDEF   P  LSL 
Sbjct: 309  DVIASIFNVKHNISRHIWPWIKTQEAGFAHCALRARNSCKWVGFIDVDEFFFLPSGLSLL 368

Query: 722  NVLNNYSGPSEVAELRSSCYSFGPSGLKHMHVKGVMVGYTCRLAVPERHKSIVKTEALNS 901
            +VL N +  + V E+R SC+SFGPSGL  M  +GV VGYTCR A  ERHKSIV  E LNS
Sbjct: 369  DVLRNQAKNASVGEIRVSCHSFGPSGLTRMPPQGVTVGYTCRKATAERHKSIVNPEVLNS 428

Query: 902  SLINVVHHFHLSDGYKYVNMNRSVMVINHYKYQVWEVFKEKFYRRVATYVFDWQQAKNVE 1081
            +LINVVHHFHL DG+ Y+N+ RS MVINHYKYQVWEVFKEKFYRRVATYV DWQ+ +NV 
Sbjct: 429  TLINVVHHFHLRDGFHYMNLERSEMVINHYKYQVWEVFKEKFYRRVATYVADWQEEQNVG 488

Query: 1082 SRDRVRGLGTQAIEPPDWSSRFCEVHDTDLKQKVLDTFSDPKTGMLPWQE 1231
            S+DR  GLGT+A+EP DWSSRFCEV+DT L+  VL   ++ +T +LPWQE
Sbjct: 489  SKDRAPGLGTKAVEPEDWSSRFCEVNDTGLRDMVLQNLANRRTHLLPWQE 538


Top