BLASTX nr result

ID: Bupleurum21_contig00001120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001120
         (1910 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274463.1| PREDICTED: AP-1 complex subunit mu-1 [Vitis ...   482   e-133
gb|AEL99016.1| AP-1 complex subunit mu, partial [Silene latifoli...   476   e-132
ref|XP_002527911.1| clathrin coat assembly protein ap-1, putativ...   475   e-131
ref|XP_002511345.1| clathrin coat assembly protein ap-1, putativ...   475   e-131
ref|XP_004155408.1| PREDICTED: AP-1 complex subunit mu-1-like, p...   474   e-131

>ref|XP_002274463.1| PREDICTED: AP-1 complex subunit mu-1 [Vitis vinifera]
            gi|296083422|emb|CBI23375.3| unnamed protein product
            [Vitis vinifera]
          Length = 428

 Score =  482 bits (1240), Expect = e-133
 Identities = 241/252 (95%), Positives = 249/252 (98%)
 Frame = -1

Query: 1100 VVESVNILVNSNGQIIRSEVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRATKGKAIDL 921
            VVESVNILVNSNGQIIRS+VVGALKMRTYLSGMPECKLGLNDRVLLEAQGR+TKGKAIDL
Sbjct: 177  VVESVNILVNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRSTKGKAIDL 236

Query: 920  DDIKFHQCVRLSRFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQVERHSRSRMEI 741
            DDIKFHQCVRL+RFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQVERHSRSR+EI
Sbjct: 237  DDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQVERHSRSRIEI 296

Query: 740  MVKARSQFKERSTATNVEIELPVPSDAINPNLRTSMGSASYAPENDALLWKIKSFPGGKE 561
            MVKARSQFKERSTATNVEIELPVPSDA NPN+RTSMGSA+YAPENDALLWKIKSFPGGKE
Sbjct: 297  MVKARSQFKERSTATNVEIELPVPSDATNPNIRTSMGSAAYAPENDALLWKIKSFPGGKE 356

Query: 560  YMLRAEFNLPSITDEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRY 381
            YMLRAEF+LPSIT EE APERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRY
Sbjct: 357  YMLRAEFSLPSITAEEGAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRY 416

Query: 380  ITMAGEYELRLM 345
            ITMAGEYELRL+
Sbjct: 417  ITMAGEYELRLI 428



 Score =  272 bits (696), Expect = 2e-70
 Identities = 132/148 (89%), Positives = 143/148 (96%)
 Frame = -2

Query: 1678 MSGAASALFLLDIKGRVLVWRDYRGDVTAVQAEKCFTKLIEKEGDPDTQNPVVHDDGVTY 1499
            M+GAASALFLLDIKGRVLVWRDYRGDV+AVQAE+ F KL+EKEGDP++Q+PVV+D+GVTY
Sbjct: 1    MAGAASALFLLDIKGRVLVWRDYRGDVSAVQAERFFAKLMEKEGDPESQDPVVYDNGVTY 60

Query: 1498 MFIQHNNVYLMAASRQNCNAASMFLFLHRVIDVFKHYFEELEEESLRDNFVVVYELLDEM 1319
            MFIQHNNV+LM ASRQNCNAAS  LFLHRV+DVFKHYFEELEEESLRDNFVVVYELLDEM
Sbjct: 61   MFIQHNNVFLMTASRQNCNAASHLLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM 120

Query: 1318 MDFGYPQYTEAKILSEFIKTDAYRMEVS 1235
            MDFGYPQYTEAKILSEFIKTDAYRMEVS
Sbjct: 121  MDFGYPQYTEAKILSEFIKTDAYRMEVS 148


>gb|AEL99016.1| AP-1 complex subunit mu, partial [Silene latifolia]
            gi|343172627|gb|AEL99017.1| AP-1 complex subunit mu,
            partial [Silene latifolia]
          Length = 428

 Score =  476 bits (1226), Expect = e-132
 Identities = 237/252 (94%), Positives = 246/252 (97%)
 Frame = -1

Query: 1100 VVESVNILVNSNGQIIRSEVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRATKGKAIDL 921
            VVESVNILVNSNGQIIRS+VVGALKMRTYLSGMPECKLGLNDRVLLEAQGR TKGKAIDL
Sbjct: 177  VVESVNILVNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRTTKGKAIDL 236

Query: 920  DDIKFHQCVRLSRFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQVERHSRSRMEI 741
            DDIKFHQCVRL+RFENDRTISFIPPDG+FDLMTYRLSTQVKPLIWVEAQ+ERHSRSR+EI
Sbjct: 237  DDIKFHQCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEAQIERHSRSRIEI 296

Query: 740  MVKARSQFKERSTATNVEIELPVPSDAINPNLRTSMGSASYAPENDALLWKIKSFPGGKE 561
            MVKARSQFKERSTATNVEIELPVPSDA NPN+RTSMGSASYAPE DAL+WKIKSFPGGKE
Sbjct: 297  MVKARSQFKERSTATNVEIELPVPSDATNPNIRTSMGSASYAPEKDALVWKIKSFPGGKE 356

Query: 560  YMLRAEFNLPSITDEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRY 381
            YMLRAEF+LPSI  +EA PERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRY
Sbjct: 357  YMLRAEFSLPSIQSDEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRY 416

Query: 380  ITMAGEYELRLM 345
            ITMAGEYELRLM
Sbjct: 417  ITMAGEYELRLM 428



 Score =  271 bits (693), Expect = 4e-70
 Identities = 129/148 (87%), Positives = 143/148 (96%)
 Frame = -2

Query: 1678 MSGAASALFLLDIKGRVLVWRDYRGDVTAVQAEKCFTKLIEKEGDPDTQNPVVHDDGVTY 1499
            MSGAASALFLLDIKGRVL+WRDYRGDVTA QAE+ FTKLIEKEGDP +QNPV +D+GVTY
Sbjct: 1    MSGAASALFLLDIKGRVLIWRDYRGDVTAAQAERFFTKLIEKEGDPQSQNPVAYDNGVTY 60

Query: 1498 MFIQHNNVYLMAASRQNCNAASMFLFLHRVIDVFKHYFEELEEESLRDNFVVVYELLDEM 1319
            M++QHNNVYLMAA+RQNCNAAS+ LFLHR++DVFKHYFEELEEESLRDNFVVVYELLDE+
Sbjct: 61   MYMQHNNVYLMAAARQNCNAASILLFLHRLVDVFKHYFEELEEESLRDNFVVVYELLDEI 120

Query: 1318 MDFGYPQYTEAKILSEFIKTDAYRMEVS 1235
            MDFGYPQ+TEAKILSEFIKTDAYRMEV+
Sbjct: 121  MDFGYPQFTEAKILSEFIKTDAYRMEVT 148


>ref|XP_002527911.1| clathrin coat assembly protein ap-1, putative [Ricinus communis]
            gi|223532686|gb|EEF34468.1| clathrin coat assembly
            protein ap-1, putative [Ricinus communis]
          Length = 309

 Score =  475 bits (1223), Expect = e-131
 Identities = 236/252 (93%), Positives = 248/252 (98%)
 Frame = -1

Query: 1100 VVESVNILVNSNGQIIRSEVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRATKGKAIDL 921
            VVESVNILVNSNGQ+IRS+VVGALKMRTYLSGMPECKLGLNDRVLLEAQGRATKGKAIDL
Sbjct: 58   VVESVNILVNSNGQVIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRATKGKAIDL 117

Query: 920  DDIKFHQCVRLSRFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQVERHSRSRMEI 741
            +DIKFHQCVRL+RFENDRTISFIPPDG+FDLMTYRLSTQVKPLIWVEAQVERHSRSR+EI
Sbjct: 118  EDIKFHQCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEAQVERHSRSRVEI 177

Query: 740  MVKARSQFKERSTATNVEIELPVPSDAINPNLRTSMGSASYAPENDALLWKIKSFPGGKE 561
             VKARSQFKERSTATNVEIELPVP+DA NPN+RTSMGSASYAPENDAL+WKIKSFPGGKE
Sbjct: 178  TVKARSQFKERSTATNVEIELPVPTDASNPNVRTSMGSASYAPENDALMWKIKSFPGGKE 237

Query: 560  YMLRAEFNLPSITDEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRY 381
            YM+RAEF+LPSIT EE APERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRY
Sbjct: 238  YMMRAEFSLPSITAEEGAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRY 297

Query: 380  ITMAGEYELRLM 345
            ITMAGEYELRL+
Sbjct: 298  ITMAGEYELRLI 309



 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = -2

Query: 1321 MMDFGYPQYTEAKILSEFIKTDAYRMEVS 1235
            MMDFGYPQYTEAKILSEFIKTDAYRME +
Sbjct: 1    MMDFGYPQYTEAKILSEFIKTDAYRMETT 29


>ref|XP_002511345.1| clathrin coat assembly protein ap-1, putative [Ricinus communis]
            gi|223550460|gb|EEF51947.1| clathrin coat assembly
            protein ap-1, putative [Ricinus communis]
          Length = 428

 Score =  475 bits (1222), Expect = e-131
 Identities = 237/252 (94%), Positives = 246/252 (97%)
 Frame = -1

Query: 1100 VVESVNILVNSNGQIIRSEVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRATKGKAIDL 921
            VVESVNILVNSNGQIIRS+VVGALKMRTYLSGMPECKLGLNDRVLLEAQGRATKGKAIDL
Sbjct: 177  VVESVNILVNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRATKGKAIDL 236

Query: 920  DDIKFHQCVRLSRFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQVERHSRSRMEI 741
            DDIKFHQCVRL+RFENDRTISFIPPDG+FDLMTYRLSTQVKPLIWVEAQVERHSRSR+E 
Sbjct: 237  DDIKFHQCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEAQVERHSRSRIEF 296

Query: 740  MVKARSQFKERSTATNVEIELPVPSDAINPNLRTSMGSASYAPENDALLWKIKSFPGGKE 561
            MVKARSQFKERSTATNVEIELPVPSDA NPN+R+SMGSA+YAPENDAL+WKIKSFPG KE
Sbjct: 297  MVKARSQFKERSTATNVEIELPVPSDATNPNIRSSMGSATYAPENDALVWKIKSFPGNKE 356

Query: 560  YMLRAEFNLPSITDEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRY 381
            YMLRAEF LPSIT EEA PERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRY
Sbjct: 357  YMLRAEFKLPSITAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRY 416

Query: 380  ITMAGEYELRLM 345
            ITMAGEYELRL+
Sbjct: 417  ITMAGEYELRLI 428



 Score =  268 bits (685), Expect = 4e-69
 Identities = 127/148 (85%), Positives = 145/148 (97%)
 Frame = -2

Query: 1678 MSGAASALFLLDIKGRVLVWRDYRGDVTAVQAEKCFTKLIEKEGDPDTQNPVVHDDGVTY 1499
            M+GAASALFLLDIKGRVL+WRDYRGDV+AVQAE+ FTKLIEKEGDP +Q+PVV+D+GVTY
Sbjct: 1    MAGAASALFLLDIKGRVLIWRDYRGDVSAVQAERFFTKLIEKEGDPQSQDPVVYDNGVTY 60

Query: 1498 MFIQHNNVYLMAASRQNCNAASMFLFLHRVIDVFKHYFEELEEESLRDNFVVVYELLDEM 1319
            MFIQH+N+YLM+ASRQNCNAAS+ LFLHR++DVFKHYFEELEEESLRDNFVVVYELLDE+
Sbjct: 61   MFIQHSNIYLMSASRQNCNAASILLFLHRLVDVFKHYFEELEEESLRDNFVVVYELLDEI 120

Query: 1318 MDFGYPQYTEAKILSEFIKTDAYRMEVS 1235
            MDFG+PQ+TEAKILSEFIKTDAYRMEV+
Sbjct: 121  MDFGFPQFTEAKILSEFIKTDAYRMEVT 148


>ref|XP_004155408.1| PREDICTED: AP-1 complex subunit mu-1-like, partial [Cucumis sativus]
          Length = 428

 Score =  474 bits (1221), Expect = e-131
 Identities = 236/252 (93%), Positives = 246/252 (97%)
 Frame = -1

Query: 1100 VVESVNILVNSNGQIIRSEVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRATKGKAIDL 921
            VVESVNILVNSNGQIIRS+VVGALKMRTYLSGMPECKLGLNDRVLLEAQGR TKGKAIDL
Sbjct: 177  VVESVNILVNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRTTKGKAIDL 236

Query: 920  DDIKFHQCVRLSRFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQVERHSRSRMEI 741
            +DIKFHQCVRL+RFENDRTISFIPPDG+FDLMTYRLSTQVKPLIWVEAQVERHS+SR+EI
Sbjct: 237  EDIKFHQCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEAQVERHSKSRIEI 296

Query: 740  MVKARSQFKERSTATNVEIELPVPSDAINPNLRTSMGSASYAPENDALLWKIKSFPGGKE 561
            MVKARSQFKERSTATNVEIELPVP+DA NPN+RTSMGSASYAPENDAL WKI+SFPGGKE
Sbjct: 297  MVKARSQFKERSTATNVEIELPVPADATNPNVRTSMGSASYAPENDALCWKIRSFPGGKE 356

Query: 560  YMLRAEFNLPSITDEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRY 381
            YMLRAEF LPSIT EEA PERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRY
Sbjct: 357  YMLRAEFRLPSITSEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRY 416

Query: 380  ITMAGEYELRLM 345
            ITMAGEYELRL+
Sbjct: 417  ITMAGEYELRLI 428



 Score =  266 bits (681), Expect = 1e-68
 Identities = 127/146 (86%), Positives = 140/146 (95%)
 Frame = -2

Query: 1672 GAASALFLLDIKGRVLVWRDYRGDVTAVQAEKCFTKLIEKEGDPDTQNPVVHDDGVTYMF 1493
            GAASALFLLDIKGRVL+WRDYRGDV+AVQAE+ FTKLIEKEGDP +Q+PVV+D G++YMF
Sbjct: 3    GAASALFLLDIKGRVLIWRDYRGDVSAVQAERFFTKLIEKEGDPQSQDPVVYDSGISYMF 62

Query: 1492 IQHNNVYLMAASRQNCNAASMFLFLHRVIDVFKHYFEELEEESLRDNFVVVYELLDEMMD 1313
            IQHNNVYLM A+RQNCNAAS+  FLHRV+DVFKHYFEELEEESLRDNFVVVYELLDE+MD
Sbjct: 63   IQHNNVYLMVAARQNCNAASLLSFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEIMD 122

Query: 1312 FGYPQYTEAKILSEFIKTDAYRMEVS 1235
            FGYPQYTEAKILSEFIKTDAYRMEV+
Sbjct: 123  FGYPQYTEAKILSEFIKTDAYRMEVA 148


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