BLASTX nr result
ID: Bupleurum21_contig00001108
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00001108
(2691 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI36172.3| unnamed protein product [Vitis vinifera] 225 4e-56
ref|XP_002280072.1| PREDICTED: uncharacterized protein LOC100256... 225 4e-56
ref|XP_002528177.1| conserved hypothetical protein [Ricinus comm... 216 3e-53
ref|XP_002298138.1| predicted protein [Populus trichocarpa] gi|2... 201 1e-48
ref|XP_002303278.1| predicted protein [Populus trichocarpa] gi|2... 190 2e-45
>emb|CBI36172.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 225 bits (574), Expect = 4e-56
Identities = 108/162 (66%), Positives = 128/162 (79%), Gaps = 2/162 (1%)
Frame = +2
Query: 1874 VHSNGRGSFPYGGTQVVGASGNLGSTHGDVNFPGMPTFLPVMQFNGQHPGGMGVPAVGMA 2053
V +GRGSF Y G QV+GA+GN+G HGD NFPG P FLPVMQF GQHPGG+GVPAVGMA
Sbjct: 470 VQGSGRGSFLYNGAQVMGATGNMGVGHGDQNFPGTPAFLPVMQFGGQHPGGIGVPAVGMA 529
Query: 2054 FPGYVGNP--GSGNSEMTWLPILAGPAGALSASYNSPHISVDGSYHARPGQVPSLAGASS 2227
FPGYV NP G GNSEMTWLP+LAG AGAL A+Y P+I+VDG+YHARP S AG+S+
Sbjct: 530 FPGYVANPQLGLGNSEMTWLPVLAGAAGALGATYCPPYIAVDGAYHARPSGQTSSAGSSN 589
Query: 2228 KESNINKPAIDLMPSQKQELASNELGQRQNKARRYTEMKFDQ 2353
KE++ +KP+ + PSQ+ EL S+E GQRQNK RRY+EM F Q
Sbjct: 590 KENSSSKPSSEWKPSQRPELVSDEFGQRQNKPRRYSEMNFGQ 631
Score = 180 bits (456), Expect = 2e-42
Identities = 130/366 (35%), Positives = 176/366 (48%), Gaps = 18/366 (4%)
Frame = +1
Query: 670 PSAVPTAGAFYMHDDRFRESPXXXXXXXXXXXXXXWESKDDRRWGHDKFEEMTIQERHYX 849
P AVPTAGAFYMHDDRFR++ WESKDDR+WGHDKFEEMT+QERHY
Sbjct: 79 PFAVPTAGAFYMHDDRFRDNAGGRHRRTLGGRKL-WESKDDRKWGHDKFEEMTMQERHYE 137
Query: 850 XXXXXXXXXXXXXXXXXXXERGYPRGNRHKMFXXXXXXXXXXXXXXXXXXXXXXX----- 1014
+RGY RGNR K +
Sbjct: 138 EGRRNSKGHYHARGKNRGADRGYGRGNRSKAYNNHNNSNNNNNVSSNNNNSNSSSNQNQV 197
Query: 1015 -KGVRGRGPRRYQSDW---NEVP-QNKEHWKSVDGGGSHDTSAEVSERTSTVESHPISDK 1179
+ VRGRGPRRY+ +E P QNK+ KS + SH +S TS V S PI +
Sbjct: 198 PRSVRGRGPRRYEPPARYKSETPTQNKQSGKSFEKA-SHSSSGRAFTPTSNVASDPIPTR 256
Query: 1180 KQVF-SRLXXXXXXXXXXXXXXXENGSTENRDNKDTPLRRNQQSSITDKNFSLSASNRM- 1353
K VF S L E T+ RD RN + S+ +++F S S +
Sbjct: 257 KHVFASSLSSASPPFYPSGSSNKEISLTQKRDLHTGTTNRNIRPSVAEESFGTSQSGALP 316
Query: 1354 RGKNVADFIGINNLHIDEQAPTHHTGKPLTSSQLQGLVHVGTNSSESPHSKVQGRVQTQT 1533
RGKN+ D +G++ L+ID+ + GK L + QL +++SP + QGR +
Sbjct: 317 RGKNIVDSVGMDKLYIDDSL-SPVAGKSLNNLQLPSSGSSLITTTQSPQVRAQGRGLAPS 375
Query: 1534 GKITYQST-QQNQVYRVSNPSQHRNGPQVPALTR-QVSFQASGRQLGQ----GTQDSSSP 1695
G++ +Q T NQ+ R + P+Q + P R Q S Q+S +QLGQ G+Q SS P
Sbjct: 376 GQMNFQPTLSHNQLNRAAPPAQLHAVQRSPVQARVQPSLQSSSQQLGQRPGSGSQTSSPP 435
Query: 1696 DSAFTV 1713
+A ++
Sbjct: 436 KNALSI 441
>ref|XP_002280072.1| PREDICTED: uncharacterized protein LOC100256571 [Vitis vinifera]
Length = 676
Score = 225 bits (574), Expect = 4e-56
Identities = 108/162 (66%), Positives = 128/162 (79%), Gaps = 2/162 (1%)
Frame = +2
Query: 1874 VHSNGRGSFPYGGTQVVGASGNLGSTHGDVNFPGMPTFLPVMQFNGQHPGGMGVPAVGMA 2053
V +GRGSF Y G QV+GA+GN+G HGD NFPG P FLPVMQF GQHPGG+GVPAVGMA
Sbjct: 515 VQGSGRGSFLYNGAQVMGATGNMGVGHGDQNFPGTPAFLPVMQFGGQHPGGIGVPAVGMA 574
Query: 2054 FPGYVGNP--GSGNSEMTWLPILAGPAGALSASYNSPHISVDGSYHARPGQVPSLAGASS 2227
FPGYV NP G GNSEMTWLP+LAG AGAL A+Y P+I+VDG+YHARP S AG+S+
Sbjct: 575 FPGYVANPQLGLGNSEMTWLPVLAGAAGALGATYCPPYIAVDGAYHARPSGQTSSAGSSN 634
Query: 2228 KESNINKPAIDLMPSQKQELASNELGQRQNKARRYTEMKFDQ 2353
KE++ +KP+ + PSQ+ EL S+E GQRQNK RRY+EM F Q
Sbjct: 635 KENSSSKPSSEWKPSQRPELVSDEFGQRQNKPRRYSEMNFGQ 676
Score = 149 bits (375), Expect = 5e-33
Identities = 118/364 (32%), Positives = 164/364 (45%), Gaps = 16/364 (4%)
Frame = +1
Query: 670 PSAVPTAGAFYMHDDRFRESPXXXXXXXXXXXXXXWESKDDRRWGHDKFEEMTIQERHYX 849
P AVPTAGAFYMHDDRFR++ WESKDDR+WGHDKFEEMT+QERHY
Sbjct: 158 PFAVPTAGAFYMHDDRFRDNAGGRHRRTLGGRKL-WESKDDRKWGHDKFEEMTMQERHYE 216
Query: 850 XXXXXXXXXXXXXXXXXXXERGYPRGNRHKMFXXXXXXXXXXXXXXXXXXXXXXX----- 1014
+RGY RGNR K +
Sbjct: 217 EGRRNSKGHYHARGKNRGADRGYGRGNRSKAYNNHNNSNNNNNVSSNNNNSNSSSNQNQV 276
Query: 1015 -KGVRGRGPRRYQSD---WNEVP-QNKEHWKSVDGGGSHDTSAEVSERTSTVESHPISDK 1179
+ VRGRGPRRY+ +E P QNK+ KS + SH +S TS V S PI +
Sbjct: 277 PRSVRGRGPRRYEPPARYKSETPTQNKQSGKSFE-KASHSSSGRAFTPTSNVASDPIPTR 335
Query: 1180 KQVFSRLXXXXXXXXXXXXXXXENGSTENRDNKDTPLRRNQQSSITDKNFSLSASNRMRG 1359
K VF+ + + P S ++K SL+ ++
Sbjct: 336 KHVFA----------------------SSLSSASPPF---YPSGSSNKEISLTQKRDLQ- 369
Query: 1360 KNVADFIGINNLHIDEQAPTHHTGKPLTSSQLQGLVHVGTNSSESPHSKVQGRVQTQTGK 1539
+G++ L+ID+ + GK L + QL +++SP + QGR +G+
Sbjct: 370 ------VGMDKLYIDDSL-SPVAGKSLNNLQLPSSGSSLITTTQSPQVRAQGRGLAPSGQ 422
Query: 1540 ITYQST-QQNQVYRVSNPSQHRNGPQVPALTR-QVSFQASGRQLGQ----GTQDSSSPDS 1701
+ +Q T NQ+ R + P+Q + P R Q S Q+S +QLGQ G+Q SS P +
Sbjct: 423 MNFQPTLSHNQLNRAAPPAQLHAVQRSPVQARVQPSLQSSSQQLGQRPGSGSQTSSPPKN 482
Query: 1702 AFTV 1713
A ++
Sbjct: 483 ALSI 486
>ref|XP_002528177.1| conserved hypothetical protein [Ricinus communis]
gi|223532389|gb|EEF34184.1| conserved hypothetical
protein [Ricinus communis]
Length = 683
Score = 216 bits (549), Expect = 3e-53
Identities = 105/162 (64%), Positives = 126/162 (77%), Gaps = 2/162 (1%)
Frame = +2
Query: 1874 VHSNGRGSFPYGGTQVVGASGNLGSTHGDVNFPGMPTFLPVMQFNGQHPGGMGVPAVGMA 2053
+ +GRGSF YGG QV+GA+GN+ HGD NFPG P FLPVMQF GQHPGG+GVPAVGMA
Sbjct: 518 IQGSGRGSFMYGGAQVMGATGNMNVGHGDQNFPGAPAFLPVMQFGGQHPGGIGVPAVGMA 577
Query: 2054 FPGYVGNP--GSGNSEMTWLPILAGPAGALSASYNSPHISVDGSYHARPGQVPSLAGASS 2227
FPGYV P G GNSEMTWLP+LAG AGAL A+Y SP+I+VDG+YHARP S +G+SS
Sbjct: 578 FPGYVAQPQLGLGNSEMTWLPVLAGAAGALGATYCSPYIAVDGAYHARPSGQTSSSGSSS 637
Query: 2228 KESNINKPAIDLMPSQKQELASNELGQRQNKARRYTEMKFDQ 2353
KE++ NK + + PSQK E+ ++E GQRQ K RRY+EM F Q
Sbjct: 638 KENSTNKSSNEWKPSQKPEIVNDEFGQRQ-KPRRYSEMDFKQ 678
Score = 186 bits (472), Expect = 3e-44
Identities = 136/363 (37%), Positives = 180/363 (49%), Gaps = 15/363 (4%)
Frame = +1
Query: 670 PSAVPTAGAFYMHDDRFRESPXXXXXXXXXXXXXXWESKDDRRWGHDKFEEMTIQERHY- 846
P AVPTAGAFYMHDDRFR++ WESKDD++WGHDKFEEM +QERHY
Sbjct: 144 PFAVPTAGAFYMHDDRFRDNAGGRHRRTYGGRKL-WESKDDKKWGHDKFEEMNLQERHYD 202
Query: 847 XXXXXXXXXXXXXXXXXXXXERGYPRGNRHKMFXXXXXXXXXXXXXXXXXXXXXXXKGVR 1026
+RGY R +R K F KGVR
Sbjct: 203 QGRRGSKGHYQARGGKNQGPDRGYARRSRSKAF-------------SNGNNQNQAPKGVR 249
Query: 1027 GRGPRRYQSDWNE-------VPQNKEHWKSVDGGGSHDTSAEVSERTSTVESHPISDKKQ 1185
GRGPR+Y+ W + QNK+ KS + SH +S V S ES + ++
Sbjct: 250 GRGPRKYEPRWKRSSQSQPPLTQNKQAEKSFE-KTSHGSSGRVFTPASNTESDQVPPARK 308
Query: 1186 VFSRLXXXXXXXXXXXXXXXENGSTENRDNKDTPLRRNQQSSITDKNFSL-SASNRMRGK 1362
S L + T+ RD + RN +S+ D++FS+ AS MRGK
Sbjct: 309 -NSSLSSASPPFYPSGSSNKDVTLTQKRDVQVGSTSRNPPTSVVDESFSMQQASALMRGK 367
Query: 1363 NVADFIGINNLHIDEQAPTHHTGKPLTSSQLQGLVHVGTNSSESPHSKVQGRVQTQTGKI 1542
N+AD IG++ L+ID+ GKPL S Q+Q N+ +S S+ QGR +G++
Sbjct: 368 NIADSIGVDKLYIDDSV-NSTAGKPLNSMQMQPSGSSLANTMQSSQSRAQGRGVAISGQM 426
Query: 1543 TYQSTQ-QNQVYRVSNPSQHRNGPQVPALTR-QVSFQASGRQLGQ----GTQDSSSPDSA 1704
TYQS QNQV RVS+ +Q + PA R Q S QA G QLGQ G+Q SS P++A
Sbjct: 427 TYQSNPLQNQVNRVSSATQPHPVQRNPAQNRVQPSVQAPGLQLGQRSGSGSQASSPPNTA 486
Query: 1705 FTV 1713
++
Sbjct: 487 LSI 489
>ref|XP_002298138.1| predicted protein [Populus trichocarpa] gi|222845396|gb|EEE82943.1|
predicted protein [Populus trichocarpa]
Length = 687
Score = 201 bits (510), Expect = 1e-48
Identities = 96/154 (62%), Positives = 116/154 (75%), Gaps = 2/154 (1%)
Frame = +2
Query: 1874 VHSNGRGSFPYGGTQVVGASGNLGSTHGDVNFPGMPTFLPVMQFNGQHPGGMGVPAVGMA 2053
+ NGRGSF YGG +VVGA+ N+G HGD N PG PTFLPVMQF QHPGG+GVPAVGMA
Sbjct: 528 IQGNGRGSFLYGGAEVVGATRNMGVGHGDQNLPGTPTFLPVMQFGSQHPGGIGVPAVGMA 587
Query: 2054 FPGYVGNP--GSGNSEMTWLPILAGPAGALSASYNSPHISVDGSYHARPGQVPSLAGASS 2227
FPGYV P G GNSEMTWLP+L G AGAL A+Y SP+++VDG+YH RP + S G+SS
Sbjct: 588 FPGYVAQPQLGLGNSEMTWLPVLTGAAGALGATYCSPYLTVDGAYHGRPSRQASCLGSSS 647
Query: 2228 KESNINKPAIDLMPSQKQELASNELGQRQNKARR 2329
+ES+ N P + P+Q+ ELAS+E GQRQ R+
Sbjct: 648 EESSSNVPDNEWKPTQRPELASDEFGQRQKPRRQ 681
Score = 143 bits (360), Expect = 3e-31
Identities = 118/368 (32%), Positives = 167/368 (45%), Gaps = 20/368 (5%)
Frame = +1
Query: 670 PSAVPTAGAFYMHDDRFRESPXXXXXXXXXXXXXXWESKDDRRWGHDKFEEMTIQERHY- 846
P AVPTAGAFYMHDDRFR+S WESKD+++WGHDKFEEMT+QERHY
Sbjct: 151 PFAVPTAGAFYMHDDRFRDSAGGRHRRTLGRRKL-WESKDNKKWGHDKFEEMTLQERHYE 209
Query: 847 XXXXXXXXXXXXXXXXXXXXERGYPRGNRHKMFXXXXXXXXXXXXXXXXXXXXXXXKGVR 1026
E+GY R NR + F K VR
Sbjct: 210 QGRRNAKGNFHARGGKNRGPEQGYARRNRSQSF-------------SDGNNQNQAPKAVR 256
Query: 1027 GRGPRRYQSDW---NEVP--QNKEHWKSVDGGGSHDTSAEVSERTSTVESHPISDKKQVF 1191
GRGPR+ +S + E P Q+K+ K ++ SH +S V S ESH + ++
Sbjct: 257 GRGPRKGESTFKSRRETPPVQSKQPGKPLE-KHSHGSSGRVLISASNTESHQVPTARK-N 314
Query: 1192 SRLXXXXXXXXXXXXXXXENGSTENRDNKDTPLRRNQQSSITDKNFSLSASNRM-RGKNV 1368
S L + + RD +N ++ + D+NF + + + RGKN+
Sbjct: 315 SNLSSASPPFYPSGSSSKDITLGQKRDVHSASTSKNHRTPVIDENFPMQQTIALVRGKNI 374
Query: 1369 ADFIGINNLHIDEQAPTHHTGKPLTSSQLQGLVHVGTNSSESPHSKVQGRVQTQTGKITY 1548
AD + I+ L+ID+ GKPL + Q V ++ +S S+ QGR + + +Y
Sbjct: 375 ADSVAIDKLYIDDSITP--AGKPLNNMQTPPSVSSVVSTIQSSQSRAQGRGVAMSSQRSY 432
Query: 1549 Q-STQQNQVYRVS----------NPSQHRNGPQVPALTR--QVSFQASGRQLGQGTQDSS 1689
Q S Q N R S +P+Q+R P PA R Q + G G+Q SS
Sbjct: 433 QGSPQHNLTNRTSPTTPLHSRQRSPAQNRIQP-APAQNRIQPAPAQPLVQHPGSGSQASS 491
Query: 1690 SPDSAFTV 1713
P +A ++
Sbjct: 492 PPKTALSL 499
>ref|XP_002303278.1| predicted protein [Populus trichocarpa] gi|222840710|gb|EEE78257.1|
predicted protein [Populus trichocarpa]
Length = 656
Score = 190 bits (482), Expect = 2e-45
Identities = 92/128 (71%), Positives = 102/128 (79%), Gaps = 2/128 (1%)
Frame = +2
Query: 1874 VHSNGRGSFPYGGTQVVGASGNLGSTHGDVNFPGMPTFLPVMQFNGQHPGGMGVPAVGMA 2053
+ NGRGSF YGGTQVVGA+GN+ HGD NF G PTFLPVMQF GQHPGG+GVPAVGMA
Sbjct: 514 IQGNGRGSFLYGGTQVVGATGNISVGHGDQNFSGTPTFLPVMQFGGQHPGGLGVPAVGMA 573
Query: 2054 FPGYVGNP--GSGNSEMTWLPILAGPAGALSASYNSPHISVDGSYHARPGQVPSLAGASS 2227
FPGYV P G GNSEMTWLP+LAG AGAL A+Y SP+ISVDG+YHARP S G+SS
Sbjct: 574 FPGYVAQPQLGLGNSEMTWLPVLAGAAGALGATYCSPYISVDGAYHARPSGKTSSLGSSS 633
Query: 2228 KESNINKP 2251
KES+ N P
Sbjct: 634 KESSTNIP 641
Score = 155 bits (391), Expect = 7e-35
Identities = 119/352 (33%), Positives = 163/352 (46%), Gaps = 8/352 (2%)
Frame = +1
Query: 670 PSAVPTAGAFYMHDDRFRESPXXXXXXXXXXXXXXWESKDDRRWGHDKFEEMTIQERHY- 846
P AVPTAGAFYMHDDRFR+S WESKDD++WGHDKFEEMT QERHY
Sbjct: 147 PFAVPTAGAFYMHDDRFRDSAGGRHRRTFGGRNL-WESKDDKKWGHDKFEEMTSQERHYE 205
Query: 847 XXXXXXXXXXXXXXXXXXXXERGYPRGNRHKMFXXXXXXXXXXXXXXXXXXXXXXXKGVR 1026
E GY R NR F K VR
Sbjct: 206 QGRRTAKGNFRARGGKSRGPEWGYARRNRSNSF-------------SDGNNQNQAPKVVR 252
Query: 1027 GRGPRRYQSDW---NEVP--QNKEHWKSVDGGGSHDTSAEVSERTSTVESHPISDKKQVF 1191
GRGPR+++S + E P QNK+ K ++ SH +S + S ES + +K
Sbjct: 253 GRGPRKFESTFKSRRETPPVQNKQPGKPLE-KRSHGSSGRILTSLSNTESDELPTRKH-- 309
Query: 1192 SRLXXXXXXXXXXXXXXXENGSTENRDNKDTPLRRNQQSSITDKNFSLSA-SNRMRGKNV 1368
S L + S++ RD +N ++ + D+NF + S +RGKN+
Sbjct: 310 SSLSSASPPFYPSGSSNKDITSSQKRDIHGASTSKNLRTPVIDENFPMQQHSALVRGKNI 369
Query: 1369 ADFIGINNLHIDEQAPTHHTGKPLTSSQLQGLVHVGTNSSESPHSKVQGRVQTQTGKITY 1548
AD + I+ L+ID+ T GKPL++ Q+ NS S S+ QGR + ++TY
Sbjct: 370 ADSVSIDKLYIDDSI-TPAAGKPLSNMQMPPSGSSVVNSITSSQSRAQGRSAAMSSQMTY 428
Query: 1549 Q-STQQNQVYRVSNPSQHRNGPQVPALTRQVSFQASGRQLGQGTQDSSSPDS 1701
Q + QQNQ+ + S + + ++PA R Q S +QL Q S S
Sbjct: 429 QGAPQQNQINKTSPTAPIHSLQRIPAQNR---IQPSAQQLVQHPSSDSPASS 477