BLASTX nr result

ID: Bupleurum21_contig00001100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001100
         (1131 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283079.1| PREDICTED: CBS domain-containing protein CBS...   299   1e-78
ref|XP_003611689.1| Inosine-5'-monophosphate dehydrogenase [Medi...   295   1e-77
ref|NP_195409.1| cystathionine beta-synthase domain-containing p...   293   4e-77
ref|XP_002306482.1| predicted protein [Populus trichocarpa] gi|2...   293   4e-77
gb|ACJ86133.1| unknown [Medicago truncatula] gi|388495112|gb|AFK...   293   5e-77

>ref|XP_002283079.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
           [Vitis vinifera]
          Length = 246

 Score =  299 bits (765), Expect = 1e-78
 Identities = 154/195 (78%), Positives = 171/195 (87%)
 Frame = +2

Query: 272 SKAVSLTAGRRSPWSLKPLASSSTLTPNSVPPRNGLYTVGDFMTKKEELHVVKPTTTVDE 451
           S++  ++  RRSP     LA++ TL  NSVP +NG+YTVGDFMT+KE+LHVVK TTTV+E
Sbjct: 54  SRSERISGIRRSP----ALAAAGTLMANSVPSKNGVYTVGDFMTRKEDLHVVKATTTVEE 109

Query: 452 ALNALVENRITGFPVIDDEWKLVGLVSDYDLLALDSVSGTGRSDTNMFPEVDSTWKTFNE 631
           AL  LVENRITGFPVIDD+WKLVGLVSDYDLLALDS+SG G +DT MFPEVDSTWKTFNE
Sbjct: 110 ALEILVENRITGFPVIDDDWKLVGLVSDYDLLALDSISGGGLTDTIMFPEVDSTWKTFNE 169

Query: 632 VQNLLSKTNGKVVGDLMTPAPMVVRECTNLEDAARLLLETKYRRLPVVDDVGRLVGIITR 811
           +Q LLSKTNGKVVGDLMTPAP+VVRE TNLEDAARLLLETKYRRLPVVD  G+LVGIITR
Sbjct: 170 LQKLLSKTNGKVVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDSDGKLVGIITR 229

Query: 812 GNVVRAALQIKRAAE 856
           GNVVRAALQIKRA E
Sbjct: 230 GNVVRAALQIKRAVE 244


>ref|XP_003611689.1| Inosine-5'-monophosphate dehydrogenase [Medicago truncatula]
           gi|355513024|gb|AES94647.1| Inosine-5'-monophosphate
           dehydrogenase [Medicago truncatula]
          Length = 224

 Score =  295 bits (756), Expect = 1e-77
 Identities = 145/181 (80%), Positives = 167/181 (92%)
 Frame = +2

Query: 323 PLASSSTLTPNSVPPRNGLYTVGDFMTKKEELHVVKPTTTVDEALNALVENRITGFPVID 502
           PL +++TLT NSVPP+NG+YTVGDFMTKK+ELH VKPTTTVDEAL++LVE+RITGFPVID
Sbjct: 44  PLFAANTLTANSVPPKNGVYTVGDFMTKKDELHTVKPTTTVDEALDSLVEHRITGFPVID 103

Query: 503 DEWKLVGLVSDYDLLALDSVSGTGRSDTNMFPEVDSTWKTFNEVQNLLSKTNGKVVGDLM 682
           D WKLVG+VSDYDLLALDS+SG G++D ++FP+VDSTWKTFNEVQ LLSKTNGKV+G+LM
Sbjct: 104 DNWKLVGVVSDYDLLALDSISGQGQTDNSLFPDVDSTWKTFNEVQRLLSKTNGKVIGELM 163

Query: 683 TPAPMVVRECTNLEDAARLLLETKYRRLPVVDDVGRLVGIITRGNVVRAALQIKRAAEAG 862
           T APMVVRE TNLEDAARLLLETK+RRLPVVD  GRLVGIITRGNVVRAALQ+KR ++  
Sbjct: 164 TTAPMVVRETTNLEDAARLLLETKFRRLPVVDAEGRLVGIITRGNVVRAALQMKRDSQKK 223

Query: 863 A 865
           A
Sbjct: 224 A 224


>ref|NP_195409.1| cystathionine beta-synthase domain-containing protein [Arabidopsis
           thaliana] gi|75219197|sp|O23193.2|CBSX1_ARATH RecName:
           Full=CBS domain-containing protein CBSX1, chloroplastic;
           AltName: Full=CBS domain-containing protein 2;
           Short=AtCDCP2; AltName: Full=Protein LOSS OF THE TIMING
           OF ET AND JA BIOSYNTHESIS 2; Short=AtLEJ2; Flags:
           Precursor gi|4006881|emb|CAB16799.1| putative protein
           [Arabidopsis thaliana] gi|7270640|emb|CAB80357.1|
           putative protein [Arabidopsis thaliana]
           gi|21537376|gb|AAM61717.1| unknown [Arabidopsis
           thaliana] gi|28392900|gb|AAO41886.1| unknown protein
           [Arabidopsis thaliana] gi|28827758|gb|AAO50723.1|
           unknown protein [Arabidopsis thaliana]
           gi|332661316|gb|AEE86716.1| cystathionine beta-synthase
           domain-containing protein [Arabidopsis thaliana]
          Length = 236

 Score =  293 bits (751), Expect = 4e-77
 Identities = 158/243 (65%), Positives = 189/243 (77%)
 Frame = +2

Query: 137 LLYMMALIFTPETLSLSLISSNDCNSSAVVVAAVLHCRRSSSLPFSKAVSLTAGRRSPWS 316
           +LY + L FTP      L +S+  +S  +++   L  +      FS+  S  +  R P +
Sbjct: 4   VLYSVPLSFTP------LRASSSPSSPYLLLPRFLSVQPCHKFTFSR--SFPSKSRIPSA 55

Query: 317 LKPLASSSTLTPNSVPPRNGLYTVGDFMTKKEELHVVKPTTTVDEALNALVENRITGFPV 496
               A+ STL  NS  PR+G+YTVG+FMTKKE+LHVVKPTTTVDEAL  LVENRITGFPV
Sbjct: 56  SS--AAGSTLMTNSSSPRSGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPV 113

Query: 497 IDDEWKLVGLVSDYDLLALDSVSGTGRSDTNMFPEVDSTWKTFNEVQNLLSKTNGKVVGD 676
           ID++WKLVGLVSDYDLLALDS+SG+GR++ +MFPEVDSTWKTFN VQ LLSKTNGK+VGD
Sbjct: 114 IDEDWKLVGLVSDYDLLALDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGD 173

Query: 677 LMTPAPMVVRECTNLEDAARLLLETKYRRLPVVDDVGRLVGIITRGNVVRAALQIKRAAE 856
           LMTPAP+VV E TNLEDAA++LLETKYRRLPVVD  G+LVGIITRGNVVRAALQIKR+ +
Sbjct: 174 LMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRSGD 233

Query: 857 AGA 865
             A
Sbjct: 234 RNA 236


>ref|XP_002306482.1| predicted protein [Populus trichocarpa] gi|222855931|gb|EEE93478.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  293 bits (751), Expect = 4e-77
 Identities = 158/205 (77%), Positives = 174/205 (84%), Gaps = 3/205 (1%)
 Frame = +2

Query: 260 SLPFSKAVSLTA---GRRSPWSLKPLASSSTLTPNSVPPRNGLYTVGDFMTKKEELHVVK 430
           S P  K VSL++    RRSP SL   ASS TL  NS  P++G+YTVGDFMT+KE+LHVVK
Sbjct: 7   STPGRKLVSLSSISWPRRSP-SLIAAASSGTLMANS--PKSGVYTVGDFMTRKEDLHVVK 63

Query: 431 PTTTVDEALNALVENRITGFPVIDDEWKLVGLVSDYDLLALDSVSGTGRSDTNMFPEVDS 610
           PTTTV+EAL  LVE RITGFPVIDD+WKLVGLVSDYDLLALDS+SG GR++TNMFPEVDS
Sbjct: 64  PTTTVNEALETLVERRITGFPVIDDDWKLVGLVSDYDLLALDSISGGGRTETNMFPEVDS 123

Query: 611 TWKTFNEVQNLLSKTNGKVVGDLMTPAPMVVRECTNLEDAARLLLETKYRRLPVVDDVGR 790
           TWKTFNEVQ LL+KTNGKVVGDLMTPAP+VVRE TNLED+ RLLLETKYRRLPVVD  G+
Sbjct: 124 TWKTFNEVQMLLNKTNGKVVGDLMTPAPVVVRETTNLEDSVRLLLETKYRRLPVVDADGK 183

Query: 791 LVGIITRGNVVRAALQIKRAAEAGA 865
           LVGIITRGNVVRAAL IK A E  A
Sbjct: 184 LVGIITRGNVVRAALHIKHAMERKA 208


>gb|ACJ86133.1| unknown [Medicago truncatula] gi|388495112|gb|AFK35622.1| unknown
           [Medicago truncatula]
          Length = 224

 Score =  293 bits (750), Expect = 5e-77
 Identities = 144/181 (79%), Positives = 166/181 (91%)
 Frame = +2

Query: 323 PLASSSTLTPNSVPPRNGLYTVGDFMTKKEELHVVKPTTTVDEALNALVENRITGFPVID 502
           PL +++TLT NSVPP+NG+YTVGDFMTKK+ELH VKPTTTVDEAL++LVE+RITGFPVID
Sbjct: 44  PLFAANTLTANSVPPKNGVYTVGDFMTKKDELHTVKPTTTVDEALDSLVEHRITGFPVID 103

Query: 503 DEWKLVGLVSDYDLLALDSVSGTGRSDTNMFPEVDSTWKTFNEVQNLLSKTNGKVVGDLM 682
           D WKLVG+VSDYDLLALDS+SG G++D ++FP+VDSTWKTFNEVQ L SKTNGKV+G+LM
Sbjct: 104 DNWKLVGVVSDYDLLALDSISGQGQTDNSLFPDVDSTWKTFNEVQRLQSKTNGKVIGELM 163

Query: 683 TPAPMVVRECTNLEDAARLLLETKYRRLPVVDDVGRLVGIITRGNVVRAALQIKRAAEAG 862
           T APMVVRE TNLEDAARLLLETK+RRLPVVD  GRLVGIITRGNVVRAALQ+KR ++  
Sbjct: 164 TTAPMVVRETTNLEDAARLLLETKFRRLPVVDAEGRLVGIITRGNVVRAALQMKRDSQKK 223

Query: 863 A 865
           A
Sbjct: 224 A 224


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