BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001082
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275908.1| PREDICTED: high mobility group B protein 14 ...   110   6e-30
ref|XP_002305996.1| high mobility group family [Populus trichoca...   107   7e-28
ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus...   102   5e-26
ref|XP_003531090.1| PREDICTED: high mobility group B protein 14-...    96   5e-26
gb|AFK38905.1| unknown [Medicago truncatula]                          100   9e-25

>ref|XP_002275908.1| PREDICTED: high mobility group B protein 14 [Vitis vinifera]
           gi|297740668|emb|CBI30850.3| unnamed protein product
           [Vitis vinifera]
          Length = 175

 Score =  110 bits (274), Expect(2) = 6e-30
 Identities = 51/60 (85%), Positives = 57/60 (95%)
 Frame = -3

Query: 356 KSMRDVGKACGVKWKTMTYEEKVQYYDIATEKRAEFDRAMANYIKKKESGEDTKPEDSES 177
           KSMRD+GKACG KWKTMTYEEKVQYYDIATEKRAEFDRAMA+YIK++ESGED + EDSE+
Sbjct: 114 KSMRDIGKACGEKWKTMTYEEKVQYYDIATEKRAEFDRAMADYIKRQESGEDEEIEDSEA 173



 Score = 47.0 bits (110), Expect(2) = 6e-30
 Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
 Frame = -2

Query: 630 SSRKMVLRVRPTQKMKQ--VETDIIEEPILLRXXXXXXXXXXXXXXXXXXXXXXP--TAF 463
           S+ +MVLRVR T+K+K+  +E+ + E+    R                         TAF
Sbjct: 36  STERMVLRVRSTEKIKRAVMESRVSEKEKKPRSGNKAKAKTKKRSQRVDSKKPKKPPTAF 95

Query: 462 FYFLEDFRKGFQEENPNV 409
           FYFLEDFRK FQE+NP+V
Sbjct: 96  FYFLEDFRKEFQEQNPDV 113


>ref|XP_002305996.1| high mobility group family [Populus trichocarpa]
           gi|222848960|gb|EEE86507.1| high mobility group family
           [Populus trichocarpa]
          Length = 165

 Score =  107 bits (267), Expect(2) = 7e-28
 Identities = 52/64 (81%), Positives = 57/64 (89%)
 Frame = -3

Query: 356 KSMRDVGKACGVKWKTMTYEEKVQYYDIATEKRAEFDRAMANYIKKKESGEDTKPEDSES 177
           KSMR+VGKACG KWKTMTYEEKV+YYDIATEKRAEFDRA + YIK+KESGED  PED+ S
Sbjct: 103 KSMREVGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRATSEYIKRKESGEDEDPEDA-S 161

Query: 176 EHDE 165
           E DE
Sbjct: 162 EFDE 165



 Score = 42.7 bits (99), Expect(2) = 7e-28
 Identities = 18/21 (85%), Positives = 20/21 (95%)
 Frame = -2

Query: 471 TAFFYFLEDFRKGFQEENPNV 409
           TAFFYFLEDFRK FQE+NP+V
Sbjct: 82  TAFFYFLEDFRKEFQEQNPDV 102


>ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus communis]
           gi|223541125|gb|EEF42681.1| DNA-binding protein MNB1B,
           putative [Ricinus communis]
          Length = 198

 Score =  102 bits (254), Expect(2) = 5e-26
 Identities = 50/64 (78%), Positives = 56/64 (87%)
 Frame = -3

Query: 356 KSMRDVGKACGVKWKTMTYEEKVQYYDIATEKRAEFDRAMANYIKKKESGEDTKPEDSES 177
           KSMR++GKACG KWK MTYEEKV+YYDIATEKRAEFD+AMA YIKKKESGE  + ED +S
Sbjct: 136 KSMREIGKACGEKWKMMTYEEKVKYYDIATEKRAEFDKAMAEYIKKKESGEFEEVED-DS 194

Query: 176 EHDE 165
           E DE
Sbjct: 195 EFDE 198



 Score = 41.6 bits (96), Expect(2) = 5e-26
 Identities = 17/21 (80%), Positives = 20/21 (95%)
 Frame = -2

Query: 471 TAFFYFLEDFRKGFQEENPNV 409
           TAFFYFLEDFRK FQ++NP+V
Sbjct: 115 TAFFYFLEDFRKDFQKQNPDV 135


>ref|XP_003531090.1| PREDICTED: high mobility group B protein 14-like [Glycine max]
          Length = 148

 Score = 96.3 bits (238), Expect(2) = 5e-26
 Identities = 47/64 (73%), Positives = 53/64 (82%)
 Frame = -3

Query: 356 KSMRDVGKACGVKWKTMTYEEKVQYYDIATEKRAEFDRAMANYIKKKESGEDTKPEDSES 177
           KSMRD+GKACG KWKTMTYEEKVQYYDIAT+KR EFD AMA + KK E+GE  + +D ES
Sbjct: 86  KSMRDIGKACGEKWKTMTYEEKVQYYDIATKKREEFDNAMAEFNKKMENGEFDETDD-ES 144

Query: 176 EHDE 165
           E DE
Sbjct: 145 EFDE 148



 Score = 47.8 bits (112), Expect(2) = 5e-26
 Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
 Frame = -2

Query: 669 KKARNS-PAPPSTESSRKMVLRVRPTQKMKQV--ETDIIEEPILLRXXXXXXXXXXXXXX 499
           KKA+ S  A  ++ SSRK+VLR++  + +K+   +T+  ++P                  
Sbjct: 3   KKAKGSHSASSASASSRKLVLRIKSNEGIKRSVRQTNSRKKP-------KAKQKKNKQMF 55

Query: 498 XXXXXXXXPTAFFYFLEDFRKGFQEENPNV 409
                   PTAFFYFLEDFRK FQE+NP+V
Sbjct: 56  DAMKPKKPPTAFFYFLEDFRKEFQEQNPDV 85


>gb|AFK38905.1| unknown [Medicago truncatula]
          Length = 152

 Score = 99.8 bits (247), Expect(2) = 9e-25
 Identities = 49/64 (76%), Positives = 53/64 (82%)
 Frame = -3

Query: 356 KSMRDVGKACGVKWKTMTYEEKVQYYDIATEKRAEFDRAMANYIKKKESGEDTKPEDSES 177
           KSMRD+GKACG KWKTMT+EEKVQYYDIATEKRAEFDRA   Y KK ESGE  +  D ES
Sbjct: 90  KSMRDIGKACGEKWKTMTFEEKVQYYDIATEKRAEFDRATTEYNKKMESGE-YEETDEES 148

Query: 176 EHDE 165
           E+DE
Sbjct: 149 EYDE 152



 Score = 40.0 bits (92), Expect(2) = 9e-25
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = -2

Query: 471 TAFFYFLEDFRKGFQEENPNV 409
           TAFFYFLEDFRK F+++NP+V
Sbjct: 69  TAFFYFLEDFRKEFKDQNPDV 89