BLASTX nr result

ID: Bupleurum21_contig00001078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001078
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632864.1| PREDICTED: uncharacterized protein LOC100265...   222   5e-56
emb|CAN59845.1| hypothetical protein VITISV_004512 [Vitis vinifera]   222   5e-56
ref|XP_004158984.1| PREDICTED: uncharacterized protein LOC101224...   221   8e-56
ref|XP_004141852.1| PREDICTED: uncharacterized protein LOC101221...   221   8e-56
emb|CBI36169.3| unnamed protein product [Vitis vinifera]              220   1e-55

>ref|XP_003632864.1| PREDICTED: uncharacterized protein LOC100265296 [Vitis vinifera]
          Length = 417

 Score =  222 bits (565), Expect = 5e-56
 Identities = 117/158 (74%), Positives = 129/158 (81%), Gaps = 2/158 (1%)
 Frame = +2

Query: 2   LFSNLGTSVVNKGEGSGL--MQEVTVETGEENEKAVFTAESVLFEFLDGGWKERGKGEIK 175
           LF + G  +++K EGSG   +QEV VETGEENEKAVFTA+SVLFEF DGGWKERGKGE+K
Sbjct: 257 LFGSQGAPIISKSEGSGFPSLQEVPVETGEENEKAVFTADSVLFEFFDGGWKERGKGELK 316

Query: 176 VNVSSVGTGKARLVMRARGNYRLILNASLYPAIKLTAMDKKGITFACMNSNDEGKKDGLS 355
           VNVS  G  KARLVMRA+GNYRLILNASLYP +KLT M+K+GITFACMNS  EG KDGLS
Sbjct: 317 VNVSRDGVEKARLVMRAKGNYRLILNASLYPDMKLTNMEKRGITFACMNSIGEG-KDGLS 375

Query: 356 TFALKFKDPSIVEEFRAVVTEHKGNNTTTGLKTPENSP 469
           TFALKFKD SIVEEF   VT HKG  T T + TPENSP
Sbjct: 376 TFALKFKDASIVEEFSVAVTAHKG-KTATVMNTPENSP 412


>emb|CAN59845.1| hypothetical protein VITISV_004512 [Vitis vinifera]
          Length = 449

 Score =  222 bits (565), Expect = 5e-56
 Identities = 117/158 (74%), Positives = 129/158 (81%), Gaps = 2/158 (1%)
 Frame = +2

Query: 2   LFSNLGTSVVNKGEGSGL--MQEVTVETGEENEKAVFTAESVLFEFLDGGWKERGKGEIK 175
           LF + G  +++K EGSG   +QEV VETGEENEKAVFTA+SVLFEF DGGWKERGKGE+K
Sbjct: 289 LFGSQGAPIISKSEGSGFPSLQEVPVETGEENEKAVFTADSVLFEFFDGGWKERGKGELK 348

Query: 176 VNVSSVGTGKARLVMRARGNYRLILNASLYPAIKLTAMDKKGITFACMNSNDEGKKDGLS 355
           VNVS  G  KARLVMRA+GNYRLILNASLYP +KLT M+K+GITFACMNS  EG KDGLS
Sbjct: 349 VNVSRDGVEKARLVMRAKGNYRLILNASLYPDMKLTNMEKRGITFACMNSIGEG-KDGLS 407

Query: 356 TFALKFKDPSIVEEFRAVVTEHKGNNTTTGLKTPENSP 469
           TFALKFKD SIVEEF   VT HKG  T T + TPENSP
Sbjct: 408 TFALKFKDASIVEEFSVAVTAHKG-KTATVMNTPENSP 444


>ref|XP_004158984.1| PREDICTED: uncharacterized protein LOC101224991 [Cucumis sativus]
          Length = 466

 Score =  221 bits (563), Expect = 8e-56
 Identities = 112/158 (70%), Positives = 130/158 (82%), Gaps = 2/158 (1%)
 Frame = +2

Query: 2   LFSNLGTSVVNKGEGSGL--MQEVTVETGEENEKAVFTAESVLFEFLDGGWKERGKGEIK 175
           LF   G+S+V+K E SG   MQEV VETGEENEK VF A+S+LFEF+DG WKERGKGE+K
Sbjct: 310 LFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSWKERGKGELK 369

Query: 176 VNVSSVGTGKARLVMRARGNYRLILNASLYPAIKLTAMDKKGITFACMNSNDEGKKDGLS 355
           VNV + G G+ R++MRARGNYRLILNASLYP +KLT MDK+GITFACMNS ++GK  GLS
Sbjct: 370 VNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNSTNDGKV-GLS 428

Query: 356 TFALKFKDPSIVEEFRAVVTEHKGNNTTTGLKTPENSP 469
           T  +KFKD SIVEEFRA VTEHKG  ++T LKTPENSP
Sbjct: 429 TLGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 466


>ref|XP_004141852.1| PREDICTED: uncharacterized protein LOC101221145 [Cucumis sativus]
          Length = 404

 Score =  221 bits (563), Expect = 8e-56
 Identities = 112/158 (70%), Positives = 130/158 (82%), Gaps = 2/158 (1%)
 Frame = +2

Query: 2   LFSNLGTSVVNKGEGSGL--MQEVTVETGEENEKAVFTAESVLFEFLDGGWKERGKGEIK 175
           LF   G+S+V+K E SG   MQEV VETGEENEK VF A+S+LFEF+DG WKERGKGE+K
Sbjct: 248 LFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSWKERGKGELK 307

Query: 176 VNVSSVGTGKARLVMRARGNYRLILNASLYPAIKLTAMDKKGITFACMNSNDEGKKDGLS 355
           VNV + G G+ R++MRARGNYRLILNASLYP +KLT MDK+GITFACMNS ++GK  GLS
Sbjct: 308 VNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNSTNDGKV-GLS 366

Query: 356 TFALKFKDPSIVEEFRAVVTEHKGNNTTTGLKTPENSP 469
           T  +KFKD SIVEEFRA VTEHKG  ++T LKTPENSP
Sbjct: 367 TLGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 404


>emb|CBI36169.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score =  220 bits (561), Expect = 1e-55
 Identities = 116/153 (75%), Positives = 127/153 (83%), Gaps = 2/153 (1%)
 Frame = +2

Query: 17  GTSVVNKGEGSGL--MQEVTVETGEENEKAVFTAESVLFEFLDGGWKERGKGEIKVNVSS 190
           GT +++K EGSG   +QEV VETGEENEKAVFTA+SVLFEF DGGWKERGKGE+KVNVS 
Sbjct: 151 GTPIISKSEGSGFPSLQEVPVETGEENEKAVFTADSVLFEFFDGGWKERGKGELKVNVSR 210

Query: 191 VGTGKARLVMRARGNYRLILNASLYPAIKLTAMDKKGITFACMNSNDEGKKDGLSTFALK 370
            G  KARLVMRA+GNYRLILNASLYP +KLT M+K+GITFACMNS  EG KDGLSTFALK
Sbjct: 211 DGVEKARLVMRAKGNYRLILNASLYPDMKLTNMEKRGITFACMNSIGEG-KDGLSTFALK 269

Query: 371 FKDPSIVEEFRAVVTEHKGNNTTTGLKTPENSP 469
           FKD SIVEEF   VT HKG  T T + TPENSP
Sbjct: 270 FKDASIVEEFSVAVTAHKG-KTATVMNTPENSP 301


Top