BLASTX nr result
ID: Bupleurum21_contig00001076
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00001076
(1394 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002297878.1| predicted protein [Populus trichocarpa] gi|2... 432 e-170
ref|XP_002280957.1| PREDICTED: glycyl-tRNA synthetase 1, mitocho... 426 e-169
emb|CBI15763.3| unnamed protein product [Vitis vinifera] 426 e-169
ref|XP_002893587.1| glycyl-tRNA synthetase [Arabidopsis lyrata s... 422 e-167
gb|AAK92832.1| putative glycyl tRNA synthetase [Arabidopsis thal... 422 e-167
>ref|XP_002297878.1| predicted protein [Populus trichocarpa] gi|222845136|gb|EEE82683.1|
predicted protein [Populus trichocarpa]
Length = 690
Score = 432 bits (1112), Expect(3) = e-170
Identities = 210/220 (95%), Positives = 215/220 (97%)
Frame = -1
Query: 662 KIKEYGITAPDTKNPLSAPYPFNLMFQTSIGPSGLSPGYMRPETAQGIFVNFKDLYYYNG 483
KIKEYGITAPDTKNPLS PYPFNLMFQTSIGPSGLSPGYMRPETAQGIFVNFKDLYYYNG
Sbjct: 215 KIKEYGITAPDTKNPLSDPYPFNLMFQTSIGPSGLSPGYMRPETAQGIFVNFKDLYYYNG 274
Query: 482 SKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPEDKSHPKFPEVAKLEFLMF 303
+KLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPEDKSHPK+ EVA LEFLMF
Sbjct: 275 NKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPEDKSHPKYSEVADLEFLMF 334
Query: 302 PREDQVSGQSARKIVLGEAVAQGIVNNETLGYFIGRVYLFLTHLGIDKDRLRFRQHLANE 123
PRE QVSGQSA+KI LGEAV++GIVNNETLGYFIGRVYLFLTHLGIDKDRLRFRQHLANE
Sbjct: 335 PREQQVSGQSAKKIRLGEAVSKGIVNNETLGYFIGRVYLFLTHLGIDKDRLRFRQHLANE 394
Query: 122 MAHYAADCWDAEIESSYGWIECVGIADRSAYDLRAHTDKS 3
MAHYAADCWDAEIESSYGWIECVGIADRSAYDLRAHTDKS
Sbjct: 395 MAHYAADCWDAEIESSYGWIECVGIADRSAYDLRAHTDKS 434
Score = 150 bits (378), Expect(3) = e-170
Identities = 69/81 (85%), Positives = 76/81 (93%)
Frame = -3
Query: 993 LEENMLEVDCPCVTPEVVLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDFCKEKLERDA 814
LEENMLEVDCPCVTPEVVLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDFC EK+++D
Sbjct: 128 LEENMLEVDCPCVTPEVVLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDFCNEKIQKDL 187
Query: 813 TLAAEKVSEFKHILAVLDDLS 751
++AEK +E KH+LAVLDDLS
Sbjct: 188 GISAEKAAELKHVLAVLDDLS 208
Score = 65.1 bits (157), Expect(3) = e-170
Identities = 30/33 (90%), Positives = 33/33 (100%)
Frame = -1
Query: 1202 NREAFRQAVVNTLERRLFYIPSFKIYRGVAGLF 1104
N+EAFRQAVVNTLERRLF+IPSFKIYRGVAGL+
Sbjct: 73 NKEAFRQAVVNTLERRLFFIPSFKIYRGVAGLY 105
>ref|XP_002280957.1| PREDICTED: glycyl-tRNA synthetase 1, mitochondrial-like [Vitis
vinifera]
Length = 710
Score = 426 bits (1094), Expect(3) = e-169
Identities = 206/220 (93%), Positives = 214/220 (97%)
Frame = -1
Query: 662 KIKEYGITAPDTKNPLSAPYPFNLMFQTSIGPSGLSPGYMRPETAQGIFVNFKDLYYYNG 483
KIKEYGITAPDTKNPLSAPYPFNLMFQTSIGPSGLSPGYMRPETAQGIFVNFKDLYYYNG
Sbjct: 235 KIKEYGITAPDTKNPLSAPYPFNLMFQTSIGPSGLSPGYMRPETAQGIFVNFKDLYYYNG 294
Query: 482 SKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPEDKSHPKFPEVAKLEFLMF 303
+KLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDP+DKSHPKF EVA LEFLMF
Sbjct: 295 NKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPDDKSHPKFSEVANLEFLMF 354
Query: 302 PREDQVSGQSARKIVLGEAVAQGIVNNETLGYFIGRVYLFLTHLGIDKDRLRFRQHLANE 123
PR +QVSGQSA++ VLGEAV++GIVNNETLGYFIGRVYLFLT LGIDK+RLRFRQHLANE
Sbjct: 355 PRGEQVSGQSAKRTVLGEAVSKGIVNNETLGYFIGRVYLFLTGLGIDKERLRFRQHLANE 414
Query: 122 MAHYAADCWDAEIESSYGWIECVGIADRSAYDLRAHTDKS 3
MAHYAADCWDAEIE SYGWIECVGIADRSAYDLRAHTDKS
Sbjct: 415 MAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAHTDKS 454
Score = 155 bits (391), Expect(3) = e-169
Identities = 72/81 (88%), Positives = 77/81 (95%)
Frame = -3
Query: 993 LEENMLEVDCPCVTPEVVLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDFCKEKLERDA 814
LEENMLEVDCPCVTPE+VLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDFCKEKLE+D
Sbjct: 148 LEENMLEVDCPCVTPEIVLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDFCKEKLEKDL 207
Query: 813 TLAAEKVSEFKHILAVLDDLS 751
T++ EK +E KHILAVLDDLS
Sbjct: 208 TISGEKAAELKHILAVLDDLS 228
Score = 65.9 bits (159), Expect(3) = e-169
Identities = 31/46 (67%), Positives = 37/46 (80%)
Frame = -1
Query: 1241 METVPTTAAQEAKNREAFRQAVVNTLERRLFYIPSFKIYRGVAGLF 1104
++ T A +R+AFRQA+VNTLERRLFYIPSFKIYRGVAGL+
Sbjct: 80 LQAALTNGNDNALSRDAFRQALVNTLERRLFYIPSFKIYRGVAGLY 125
>emb|CBI15763.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 426 bits (1094), Expect(3) = e-169
Identities = 206/220 (93%), Positives = 214/220 (97%)
Frame = -1
Query: 662 KIKEYGITAPDTKNPLSAPYPFNLMFQTSIGPSGLSPGYMRPETAQGIFVNFKDLYYYNG 483
KIKEYGITAPDTKNPLSAPYPFNLMFQTSIGPSGLSPGYMRPETAQGIFVNFKDLYYYNG
Sbjct: 212 KIKEYGITAPDTKNPLSAPYPFNLMFQTSIGPSGLSPGYMRPETAQGIFVNFKDLYYYNG 271
Query: 482 SKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPEDKSHPKFPEVAKLEFLMF 303
+KLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDP+DKSHPKF EVA LEFLMF
Sbjct: 272 NKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPDDKSHPKFSEVANLEFLMF 331
Query: 302 PREDQVSGQSARKIVLGEAVAQGIVNNETLGYFIGRVYLFLTHLGIDKDRLRFRQHLANE 123
PR +QVSGQSA++ VLGEAV++GIVNNETLGYFIGRVYLFLT LGIDK+RLRFRQHLANE
Sbjct: 332 PRGEQVSGQSAKRTVLGEAVSKGIVNNETLGYFIGRVYLFLTGLGIDKERLRFRQHLANE 391
Query: 122 MAHYAADCWDAEIESSYGWIECVGIADRSAYDLRAHTDKS 3
MAHYAADCWDAEIE SYGWIECVGIADRSAYDLRAHTDKS
Sbjct: 392 MAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAHTDKS 431
Score = 155 bits (391), Expect(3) = e-169
Identities = 72/81 (88%), Positives = 77/81 (95%)
Frame = -3
Query: 993 LEENMLEVDCPCVTPEVVLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDFCKEKLERDA 814
LEENMLEVDCPCVTPE+VLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDFCKEKLE+D
Sbjct: 125 LEENMLEVDCPCVTPEIVLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDFCKEKLEKDL 184
Query: 813 TLAAEKVSEFKHILAVLDDLS 751
T++ EK +E KHILAVLDDLS
Sbjct: 185 TISGEKAAELKHILAVLDDLS 205
Score = 65.9 bits (159), Expect(3) = e-169
Identities = 31/46 (67%), Positives = 37/46 (80%)
Frame = -1
Query: 1241 METVPTTAAQEAKNREAFRQAVVNTLERRLFYIPSFKIYRGVAGLF 1104
++ T A +R+AFRQA+VNTLERRLFYIPSFKIYRGVAGL+
Sbjct: 57 LQAALTNGNDNALSRDAFRQALVNTLERRLFYIPSFKIYRGVAGLY 102
>ref|XP_002893587.1| glycyl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata]
gi|297339429|gb|EFH69846.1| glycyl-tRNA synthetase
[Arabidopsis lyrata subsp. lyrata]
Length = 730
Score = 422 bits (1084), Expect(3) = e-167
Identities = 203/220 (92%), Positives = 213/220 (96%)
Frame = -1
Query: 662 KIKEYGITAPDTKNPLSAPYPFNLMFQTSIGPSGLSPGYMRPETAQGIFVNFKDLYYYNG 483
KIKEYGITAPDTKNPLS PYPFNLMFQTSIGPSGL PGYMRPETAQGIFVNFKDLYYYNG
Sbjct: 255 KIKEYGITAPDTKNPLSDPYPFNLMFQTSIGPSGLIPGYMRPETAQGIFVNFKDLYYYNG 314
Query: 482 SKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPEDKSHPKFPEVAKLEFLMF 303
KLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPE+KSHPKF +VAKLEFLMF
Sbjct: 315 KKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPENKSHPKFSDVAKLEFLMF 374
Query: 302 PREDQVSGQSARKIVLGEAVAQGIVNNETLGYFIGRVYLFLTHLGIDKDRLRFRQHLANE 123
PRE+Q+SGQSA+K+ LGEAV++G VNNETLGYFIGRVYLFLT LGIDK+RLRFRQHLANE
Sbjct: 375 PREEQMSGQSAKKLCLGEAVSKGTVNNETLGYFIGRVYLFLTRLGIDKERLRFRQHLANE 434
Query: 122 MAHYAADCWDAEIESSYGWIECVGIADRSAYDLRAHTDKS 3
MAHYAADCWDAEIESSYGWIECVGIADRSAYDLRAH+DKS
Sbjct: 435 MAHYAADCWDAEIESSYGWIECVGIADRSAYDLRAHSDKS 474
Score = 148 bits (374), Expect(3) = e-167
Identities = 68/82 (82%), Positives = 76/82 (92%)
Frame = -3
Query: 993 LEENMLEVDCPCVTPEVVLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDFCKEKLERDA 814
LEENMLEVDCPCVTPEVVLKASGHVDKFTDLMVKDEKTGTCYRADHLLKD+C EKLE+D
Sbjct: 168 LEENMLEVDCPCVTPEVVLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDYCTEKLEKDL 227
Query: 813 TLAAEKVSEFKHILAVLDDLSP 748
T++AEK +E K +LAV++D SP
Sbjct: 228 TISAEKAAELKDVLAVMEDFSP 249
Score = 67.0 bits (162), Expect(3) = e-167
Identities = 31/46 (67%), Positives = 40/46 (86%)
Frame = -1
Query: 1241 METVPTTAAQEAKNREAFRQAVVNTLERRLFYIPSFKIYRGVAGLF 1104
++++ +++ + NREAFR+AVVNTLERRLFYIPSFKIY GVAGLF
Sbjct: 100 LQSIISSSGNGSLNREAFRKAVVNTLERRLFYIPSFKIYSGVAGLF 145
>gb|AAK92832.1| putative glycyl tRNA synthetase [Arabidopsis thaliana]
Length = 729
Score = 422 bits (1084), Expect(3) = e-167
Identities = 203/220 (92%), Positives = 213/220 (96%)
Frame = -1
Query: 662 KIKEYGITAPDTKNPLSAPYPFNLMFQTSIGPSGLSPGYMRPETAQGIFVNFKDLYYYNG 483
KI+EYGITAPDTKNPLS PYPFNLMFQTSIGPSGL PGYMRPETAQGIFVNFKDLYYYNG
Sbjct: 254 KIREYGITAPDTKNPLSDPYPFNLMFQTSIGPSGLIPGYMRPETAQGIFVNFKDLYYYNG 313
Query: 482 SKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPEDKSHPKFPEVAKLEFLMF 303
KLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPE+KSHPKF +VAKLEFLMF
Sbjct: 314 KKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPENKSHPKFSDVAKLEFLMF 373
Query: 302 PREDQVSGQSARKIVLGEAVAQGIVNNETLGYFIGRVYLFLTHLGIDKDRLRFRQHLANE 123
PRE+Q+SGQSA+K+ LGEAVA+G VNNETLGYFIGRVYLFLT LGIDK+RLRFRQHLANE
Sbjct: 374 PREEQMSGQSAKKLCLGEAVAKGTVNNETLGYFIGRVYLFLTRLGIDKERLRFRQHLANE 433
Query: 122 MAHYAADCWDAEIESSYGWIECVGIADRSAYDLRAHTDKS 3
MAHYAADCWDAEIESSYGWIECVGIADRSAYDLRAH+DKS
Sbjct: 434 MAHYAADCWDAEIESSYGWIECVGIADRSAYDLRAHSDKS 473
Score = 148 bits (374), Expect(3) = e-167
Identities = 68/82 (82%), Positives = 76/82 (92%)
Frame = -3
Query: 993 LEENMLEVDCPCVTPEVVLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDFCKEKLERDA 814
LEENMLEVDCPCVTPEVVLKASGHVDKFTDLMVKDEKTGTCYRADHLLKD+C EKLE+D
Sbjct: 167 LEENMLEVDCPCVTPEVVLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDYCTEKLEKDL 226
Query: 813 TLAAEKVSEFKHILAVLDDLSP 748
T++AEK +E K +LAV++D SP
Sbjct: 227 TISAEKAAELKDVLAVMEDFSP 248
Score = 67.0 bits (162), Expect(3) = e-167
Identities = 31/46 (67%), Positives = 40/46 (86%)
Frame = -1
Query: 1241 METVPTTAAQEAKNREAFRQAVVNTLERRLFYIPSFKIYRGVAGLF 1104
++++ +++ + NREAFR+AVVNTLERRLFYIPSFKIY GVAGLF
Sbjct: 99 LQSIISSSGNGSLNREAFRKAVVNTLERRLFYIPSFKIYSGVAGLF 144