BLASTX nr result

ID: Bupleurum21_contig00001068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001068
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522240.1| conserved hypothetical protein [Ricinus comm...    82   1e-13
gb|AFK43794.1| unknown [Lotus japonicus]                               77   4e-12
ref|XP_002277345.1| PREDICTED: uncharacterized protein LOC100260...    77   5e-12
ref|XP_002305058.1| predicted protein [Populus trichocarpa] gi|2...    75   2e-11
gb|ABK93152.1| unknown [Populus trichocarpa]                           75   2e-11

>ref|XP_002522240.1| conserved hypothetical protein [Ricinus communis]
           gi|223538493|gb|EEF40098.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 292

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 45/91 (49%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
 Frame = +3

Query: 432 KRKGKGASTKXXXXXXXXXXKGFMDLGFVFSEGDKNTKLVDIIPGLQRLGXXXXXXXXXX 611
           +RKGK A +K          KGFMDLGFVFSE DK++ LV IIPGLQRLG          
Sbjct: 171 RRKGKKALSKSLSELEFEEVKGFMDLGFVFSEEDKDSSLVSIIPGLQRLGNKDQEEEKKE 230

Query: 612 XXSSA-PAATLKRPYLSQAWEAMEFGRKSEP 701
             +SA     + RPYLS+AWEA++  +K EP
Sbjct: 231 EKNSAFDEGAVSRPYLSEAWEALDNRKKEEP 261


>gb|AFK43794.1| unknown [Lotus japonicus]
          Length = 248

 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 66/203 (32%), Positives = 84/203 (41%), Gaps = 7/203 (3%)
 Frame = +3

Query: 114 SKTKNLTNQVVYNSKVDVDEQPKLARISTS---ADNDDKMMMNTSQEXXXXXXXXXXXXX 284
           +  +N+ NQVV  S     E PKL RI T    + +D  +  + + E             
Sbjct: 31  NSAENVENQVVKESSDS--EVPKLHRIRTGHTRSMSDQSIATSFNHESLS---------- 78

Query: 285 XXPNSVLTRSPVKLQTIFSGXXXXXXXXXXXXXXXXXXXXXXIIHTRGR----KRKGKGA 452
             PNSVL     KLQTIFSG                        +  G     ++K K  
Sbjct: 79  --PNSVLLAP--KLQTIFSGKEVVDSEAEETPVVQHHEVLLSEKNNNGNSTSCEKKKKNR 134

Query: 453 STKXXXXXXXXXXKGFMDLGFVFSEGDKNTKLVDIIPGLQRLGXXXXXXXXXXXXSSAPA 632
            +K          KGFMDLGFVFS  DKN+ L  IIPGLQRLG              +  
Sbjct: 135 GSKSLSDLEFEELKGFMDLGFVFSLEDKNSSLASIIPGLQRLGKKEEEQGEEEEEEDSNE 194

Query: 633 ATLKRPYLSQAWEAMEFGRKSEP 701
           + + RPYLS+AWE     +K  P
Sbjct: 195 SLVPRPYLSEAWEFHGKRKKENP 217


>ref|XP_002277345.1| PREDICTED: uncharacterized protein LOC100260838 [Vitis vinifera]
          Length = 232

 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 44/89 (49%), Positives = 52/89 (58%)
 Frame = +3

Query: 426 GRKRKGKGASTKXXXXXXXXXXKGFMDLGFVFSEGDKNTKLVDIIPGLQRLGXXXXXXXX 605
           GRK KG   S+K          KGFMDLGFVFSE DKN+KLV I+PGLQRLG        
Sbjct: 115 GRKSKG---SSKSLSDLEFEELKGFMDLGFVFSEEDKNSKLVSIVPGLQRLG---KKGGE 168

Query: 606 XXXXSSAPAATLKRPYLSQAWEAMEFGRK 692
                 A   ++ RPYLS+AW+ M+  RK
Sbjct: 169 DDEEEDAKIVSVSRPYLSEAWDVMDRRRK 197


>ref|XP_002305058.1| predicted protein [Populus trichocarpa] gi|222848022|gb|EEE85569.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 42/91 (46%), Positives = 51/91 (56%)
 Frame = +3

Query: 429 RKRKGKGASTKXXXXXXXXXXKGFMDLGFVFSEGDKNTKLVDIIPGLQRLGXXXXXXXXX 608
           R RKGK  ++K          +GFMDLGFVFSE DK++ L  IIPGL RLG         
Sbjct: 120 RGRKGKKVTSKSLSELEYEELRGFMDLGFVFSEEDKDSNLASIIPGLHRLG------KKD 173

Query: 609 XXXSSAPAATLKRPYLSQAWEAMEFGRKSEP 701
              +     T+ RPYLS+AWE +E  RK EP
Sbjct: 174 EEEAILDEPTVCRPYLSEAWEVLEKKRKEEP 204


>gb|ABK93152.1| unknown [Populus trichocarpa]
          Length = 235

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 42/91 (46%), Positives = 51/91 (56%)
 Frame = +3

Query: 429 RKRKGKGASTKXXXXXXXXXXKGFMDLGFVFSEGDKNTKLVDIIPGLQRLGXXXXXXXXX 608
           R RKGK  ++K          +GFMDLGFVFSE DK++ L  IIPGL RLG         
Sbjct: 120 RGRKGKKVTSKSLSELEYEELRGFMDLGFVFSEEDKDSNLASIIPGLHRLG------KKD 173

Query: 609 XXXSSAPAATLKRPYLSQAWEAMEFGRKSEP 701
              +     T+ RPYLS+AWE +E  RK EP
Sbjct: 174 EEEAILDEPTVCRPYLSEAWEVLEKKRKEEP 204


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