BLASTX nr result
ID: Bupleurum21_contig00001056
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00001056
(1540 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCO66297.1| polyubiquitin [Bathycoccus prasinos] 184 4e-44
ref|XP_003608276.1| Ubiquitin [Medicago truncatula] gi|355509331... 184 4e-44
gb|ABD61727.1| polyubiquitin [Lupinus albus] 184 4e-44
gb|AAC35858.1| polyubiquitin [Capsicum chinense] 184 4e-44
ref|NP_001148453.1| LOC100282068 [Zea mays] gi|224059606|ref|XP_... 184 4e-44
>emb|CCO66297.1| polyubiquitin [Bathycoccus prasinos]
Length = 359
Score = 184 bits (468), Expect = 4e-44
Identities = 94/94 (100%), Positives = 94/94 (100%)
Frame = +1
Query: 1258 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 1437
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 124 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 183
Query: 1438 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 1539
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT
Sbjct: 184 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 217
Score = 184 bits (468), Expect = 4e-44
Identities = 94/94 (100%), Positives = 94/94 (100%)
Frame = +1
Query: 1258 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 1437
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 200 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 259
Query: 1438 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 1539
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT
Sbjct: 260 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 293
Score = 158 bits (400), Expect = 3e-36
Identities = 80/80 (100%), Positives = 80/80 (100%)
Frame = +1
Query: 1258 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 1437
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 276 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 335
Query: 1438 ADYNIQKESTLHLVLRLRGG 1497
ADYNIQKESTLHLVLRLRGG
Sbjct: 336 ADYNIQKESTLHLVLRLRGG 355
Score = 152 bits (385), Expect = 2e-34
Identities = 90/141 (63%), Positives = 90/141 (63%), Gaps = 51/141 (36%)
Frame = +1
Query: 1270 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG------------------------- 1374
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGTFRVKSRRLKFCLLALLDSATTIES 60
Query: 1375 --------------------------IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 1476
IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL
Sbjct: 61 SLALRSKKSSERREREKESALSRARGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 120
Query: 1477 VLRLRGGMQIFVKTLTGKTIT 1539
VLRLRGGMQIFVKTLTGKTIT
Sbjct: 121 VLRLRGGMQIFVKTLTGKTIT 141
>ref|XP_003608276.1| Ubiquitin [Medicago truncatula] gi|355509331|gb|AES90473.1| Ubiquitin
[Medicago truncatula]
Length = 533
Score = 184 bits (468), Expect = 4e-44
Identities = 94/94 (100%), Positives = 94/94 (100%)
Frame = +1
Query: 1258 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 1437
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 1438 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 1539
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 166
Score = 184 bits (468), Expect = 4e-44
Identities = 94/94 (100%), Positives = 94/94 (100%)
Frame = +1
Query: 1258 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 1437
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 1438 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 1539
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 242
Score = 184 bits (468), Expect = 4e-44
Identities = 94/94 (100%), Positives = 94/94 (100%)
Frame = +1
Query: 1258 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 1437
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 1438 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 1539
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT
Sbjct: 285 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 318
Score = 184 bits (468), Expect = 4e-44
Identities = 94/94 (100%), Positives = 94/94 (100%)
Frame = +1
Query: 1258 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 1437
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 377 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 436
Query: 1438 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 1539
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT
Sbjct: 437 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 470
Score = 181 bits (458), Expect = 6e-43
Identities = 92/94 (97%), Positives = 93/94 (98%)
Frame = +1
Query: 1258 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 1437
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI DKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 301 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKILDKEGIPPDQQRLIFAGKQLEDGRTL 360
Query: 1438 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 1539
+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 394
Score = 176 bits (447), Expect = 1e-41
Identities = 90/90 (100%), Positives = 90/90 (100%)
Frame = +1
Query: 1270 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 1449
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 1450 IQKESTLHLVLRLRGGMQIFVKTLTGKTIT 1539
IQKESTLHLVLRLRGGMQIFVKTLTGKTIT
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTIT 90
Score = 158 bits (400), Expect = 3e-36
Identities = 80/80 (100%), Positives = 80/80 (100%)
Frame = +1
Query: 1258 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 1437
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 453 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 512
Query: 1438 ADYNIQKESTLHLVLRLRGG 1497
ADYNIQKESTLHLVLRLRGG
Sbjct: 513 ADYNIQKESTLHLVLRLRGG 532
>gb|ABD61727.1| polyubiquitin [Lupinus albus]
Length = 132
Score = 184 bits (468), Expect = 4e-44
Identities = 94/94 (100%), Positives = 94/94 (100%)
Frame = +1
Query: 1258 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 1437
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 31 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 90
Query: 1438 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 1539
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT
Sbjct: 91 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 124
Score = 96.3 bits (238), Expect = 2e-17
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +1
Query: 1396 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 1539
LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT
Sbjct: 1 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 48
>gb|AAC35858.1| polyubiquitin [Capsicum chinense]
Length = 265
Score = 184 bits (468), Expect = 4e-44
Identities = 94/94 (100%), Positives = 94/94 (100%)
Frame = +1
Query: 1258 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 1437
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 33 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 92
Query: 1438 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 1539
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT
Sbjct: 93 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 126
Score = 184 bits (468), Expect = 4e-44
Identities = 94/94 (100%), Positives = 94/94 (100%)
Frame = +1
Query: 1258 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 1437
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 109 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 168
Query: 1438 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 1539
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT
Sbjct: 169 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 202
Score = 157 bits (396), Expect = 9e-36
Identities = 79/80 (98%), Positives = 79/80 (98%)
Frame = +1
Query: 1258 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 1437
LRGGMQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 185 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTL 244
Query: 1438 ADYNIQKESTLHLVLRLRGG 1497
ADYNIQKESTLHLVLRLRGG
Sbjct: 245 ADYNIQKESTLHLVLRLRGG 264
Score = 100 bits (248), Expect = 1e-18
Identities = 50/50 (100%), Positives = 50/50 (100%)
Frame = +1
Query: 1390 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 1539
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT
Sbjct: 1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 50
>ref|NP_001148453.1| LOC100282068 [Zea mays] gi|224059606|ref|XP_002299930.1| predicted
protein [Populus trichocarpa]
gi|357474771|ref|XP_003607671.1| Ubiquitin [Medicago
truncatula] gi|902586|gb|AAC49014.1| ubiquitin [Zea mays]
gi|195619382|gb|ACG31521.1| polyubiquitin containing 7
ubiquitin monomers [Zea mays] gi|222847188|gb|EEE84735.1|
predicted protein [Populus trichocarpa]
gi|238013752|gb|ACR37911.1| unknown [Zea mays]
gi|355508726|gb|AES89868.1| Ubiquitin [Medicago
truncatula] gi|413926508|gb|AFW66440.1| putative
ubiquitin family protein isoform 1 [Zea mays]
gi|413926509|gb|AFW66441.1| putative ubiquitin family
protein isoform 2 [Zea mays]
Length = 381
Score = 184 bits (468), Expect = 4e-44
Identities = 94/94 (100%), Positives = 94/94 (100%)
Frame = +1
Query: 1258 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 1437
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 1438 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 1539
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 166
Score = 184 bits (468), Expect = 4e-44
Identities = 94/94 (100%), Positives = 94/94 (100%)
Frame = +1
Query: 1258 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 1437
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 1438 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 1539
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 242
Score = 184 bits (468), Expect = 4e-44
Identities = 94/94 (100%), Positives = 94/94 (100%)
Frame = +1
Query: 1258 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 1437
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 1438 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 1539
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT
Sbjct: 285 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 318
Score = 176 bits (447), Expect = 1e-41
Identities = 90/90 (100%), Positives = 90/90 (100%)
Frame = +1
Query: 1270 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 1449
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 1450 IQKESTLHLVLRLRGGMQIFVKTLTGKTIT 1539
IQKESTLHLVLRLRGGMQIFVKTLTGKTIT
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTIT 90
Score = 158 bits (400), Expect = 3e-36
Identities = 80/80 (100%), Positives = 80/80 (100%)
Frame = +1
Query: 1258 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 1437
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 301 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 360
Query: 1438 ADYNIQKESTLHLVLRLRGG 1497
ADYNIQKESTLHLVLRLRGG
Sbjct: 361 ADYNIQKESTLHLVLRLRGG 380