BLASTX nr result

ID: Bupleurum21_contig00001038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001038
         (906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275729.1| PREDICTED: ribulose-1,5 bisphosphate carboxy...   199   3e-86
emb|CBI25318.3| unnamed protein product [Vitis vinifera]              194   6e-83
ref|XP_003535783.1| PREDICTED: histone-lysine N-methyltransferas...   171   9e-79
ref|XP_003592777.1| Ribulose-1,5 bisphosphate carboxylase/oxygen...   171   8e-77
ref|XP_002878015.1| SET domain-containing protein [Arabidopsis l...   163   9e-75

>ref|XP_002275729.1| PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large
           subunit N-methyltransferase, chloroplastic-like [Vitis
           vinifera]
          Length = 480

 Score =  199 bits (506), Expect(2) = 3e-86
 Identities = 95/148 (64%), Positives = 123/148 (83%)
 Frame = +1

Query: 160 DEDCRDFLPWLRQKSGAQISSSLSIGRSTYGRCLFASKCIYAGDVILEVPYTVQLSPNTL 339
           D+DC DFLPWL QK+G +ISS LSIG+STYGR LFASK I  GD IL+VPY VQ+SP+ +
Sbjct: 39  DKDCDDFLPWLEQKAGVEISSVLSIGKSTYGRSLFASKSIQTGDCILKVPYNVQISPDNV 98

Query: 340 LPHIKSLLENEVGDIAKLATVILVEQKLGQDSKWAPYVSRLPRLGDMNSTVFWSKDDLQL 519
              I SLL +EVG+IAKLA VI VE K+GQDS+WAPY++RLP+ G+M+ST+FWS+ +L++
Sbjct: 99  PSKINSLLGDEVGNIAKLAIVISVEWKMGQDSEWAPYINRLPQPGEMHSTIFWSEGELKM 158

Query: 520 IEKSSLYHETIKQRTQIEEDFLAIKPFL 603
           I++SS+Y ETI Q+ QI++DFLAIKP L
Sbjct: 159 IQQSSVYQETINQKAQIQKDFLAIKPVL 186



 Score =  146 bits (369), Expect(2) = 3e-86
 Identities = 68/101 (67%), Positives = 88/101 (87%)
 Frame = +3

Query: 603 SRAWTSPMGVAMIPFADFLNHDGISEADVFCNEAKQLSEVIADRDYAPGDQVLIRYGKFS 782
           SRAW S  G+++IPFADF+NHDG S++ +  +E KQLSEVIADR+YAPG+QVLIRYGKF 
Sbjct: 211 SRAWGSTKGLSLIPFADFVNHDGFSDSVLLGDEDKQLSEVIADRNYAPGEQVLIRYGKFP 270

Query: 783 NRTLLLDFGFTLPTNLYDEVQIELDIPHDDPLRSMKMDLLN 905
           N TLLLDFGFTLP N+YD+VQI+++IPH D LR++K++LL+
Sbjct: 271 NATLLLDFGFTLPYNIYDQVQIQVNIPHHDLLRTLKLELLH 311


>emb|CBI25318.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score =  194 bits (494), Expect(2) = 6e-83
 Identities = 95/149 (63%), Positives = 123/149 (82%), Gaps = 1/149 (0%)
 Frame = +1

Query: 160 DEDCRDFLPWLRQKSGAQISSSLSIGRSTYG-RCLFASKCIYAGDVILEVPYTVQLSPNT 336
           D+DC DFLPWL QK+G +ISS LSIG+STYG R LFASK I  GD IL+VPY VQ+SP+ 
Sbjct: 39  DKDCDDFLPWLEQKAGVEISSVLSIGKSTYGSRSLFASKSIQTGDCILKVPYNVQISPDN 98

Query: 337 LLPHIKSLLENEVGDIAKLATVILVEQKLGQDSKWAPYVSRLPRLGDMNSTVFWSKDDLQ 516
           +   I SLL +EVG+IAKLA VI VE K+GQDS+WAPY++RLP+ G+M+ST+FWS+ +L+
Sbjct: 99  VPSKINSLLGDEVGNIAKLAIVISVEWKMGQDSEWAPYINRLPQPGEMHSTIFWSEGELK 158

Query: 517 LIEKSSLYHETIKQRTQIEEDFLAIKPFL 603
           +I++SS+Y ETI Q+ QI++DFLAIKP L
Sbjct: 159 MIQQSSVYQETINQKAQIQKDFLAIKPVL 187



 Score =  140 bits (352), Expect(2) = 6e-83
 Identities = 68/107 (63%), Positives = 88/107 (82%), Gaps = 6/107 (5%)
 Frame = +3

Query: 603 SRAWTSPMGVAMIPFADFLNHDGISEADVFCNEAKQLSE------VIADRDYAPGDQVLI 764
           SRAW S  G+++IPFADF+NHDG S++ +  +E KQLSE      VIADR+YAPG+QVLI
Sbjct: 212 SRAWGSTKGLSLIPFADFVNHDGFSDSVLLGDEDKQLSESSSTLEVIADRNYAPGEQVLI 271

Query: 765 RYGKFSNRTLLLDFGFTLPTNLYDEVQIELDIPHDDPLRSMKMDLLN 905
           RYGKF N TLLLDFGFTLP N+YD+VQI+++IPH D LR++K++LL+
Sbjct: 272 RYGKFPNATLLLDFGFTLPYNIYDQVQIQVNIPHHDLLRTLKLELLH 318


>ref|XP_003535783.1| PREDICTED: histone-lysine N-methyltransferase setd3-like [Glycine
           max]
          Length = 463

 Score =  171 bits (433), Expect(2) = 9e-79
 Identities = 82/136 (60%), Positives = 110/136 (80%)
 Frame = +1

Query: 187 WLRQKSGAQISSSLSIGRSTYGRCLFASKCIYAGDVILEVPYTVQLSPNTLLPHIKSLLE 366
           WL +K+   ISSSL IG S+YGR LFASK I  GD IL+VPY VQ++ + LLP I+SL+ 
Sbjct: 39  WLERKAACSISSSLFIGNSSYGRSLFASKIIQTGDCILKVPYRVQITADNLLPEIRSLIG 98

Query: 367 NEVGDIAKLATVILVEQKLGQDSKWAPYVSRLPRLGDMNSTVFWSKDDLQLIEKSSLYHE 546
            EVG+IAKLATVIL+E+KLGQ S+W PY+S LP+ G++++TVFW++ +L++I  SS+Y E
Sbjct: 99  EEVGNIAKLATVILIEKKLGQGSEWYPYISCLPQQGELHNTVFWTESELEMIRPSSVYQE 158

Query: 547 TIKQRTQIEEDFLAIK 594
           TI Q++QIE+DFLAIK
Sbjct: 159 TIDQKSQIEKDFLAIK 174



 Score =  149 bits (377), Expect(2) = 9e-79
 Identities = 73/106 (68%), Positives = 87/106 (82%), Gaps = 5/106 (4%)
 Frame = +3

Query: 603 SRAWTSPMGVAMIPFADFLNHDGISEADVFCNEAKQLSEV-----IADRDYAPGDQVLIR 767
           SRAW S  G+A+IPFADFLNHDG+SEA V  ++ KQ SEV     IADRDYAPG+QVLIR
Sbjct: 212 SRAWGSTNGLALIPFADFLNHDGVSEAIVMSDDDKQCSEVQSLQIIADRDYAPGEQVLIR 271

Query: 768 YGKFSNRTLLLDFGFTLPTNLYDEVQIELDIPHDDPLRSMKMDLLN 905
           YGKFSN TL+LDFGFT+P N+YD+VQI+ DIP  DPLR MK++LL+
Sbjct: 272 YGKFSNATLMLDFGFTIPYNIYDQVQIQFDIPKHDPLRDMKLELLH 317


>ref|XP_003592777.1| Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit
           N-methyltransferase [Medicago truncatula]
           gi|355481825|gb|AES63028.1| Ribulose-1,5 bisphosphate
           carboxylase/oxygenase large subunit N-methyltransferase
           [Medicago truncatula]
          Length = 451

 Score =  171 bits (432), Expect(2) = 8e-77
 Identities = 79/141 (56%), Positives = 110/141 (78%)
 Frame = +1

Query: 175 DFLPWLRQKSGAQISSSLSIGRSTYGRCLFASKCIYAGDVILEVPYTVQLSPNTLLPHIK 354
           +FLPWL  K+ + ISSSLSI  S+YG  LFASK I  GD IL+VPY++QL+P+ L P IK
Sbjct: 36  NFLPWLENKASSTISSSLSISNSSYGNSLFASKSIQTGDCILQVPYSLQLTPDNLPPEIK 95

Query: 355 SLLENEVGDIAKLATVILVEQKLGQDSKWAPYVSRLPRLGDMNSTVFWSKDDLQLIEKSS 534
             +  +VG+IAKLATV+L+ + LGQDS+W PY+S LP   +M++T+FW++ +L++I +SS
Sbjct: 96  PFISEDVGNIAKLATVLLIHKNLGQDSEWHPYISCLPPQAEMHNTIFWNESELEMIRQSS 155

Query: 535 LYHETIKQRTQIEEDFLAIKP 597
           +Y ETI Q++QIE+DFL IKP
Sbjct: 156 VYQETIYQKSQIEKDFLEIKP 176



 Score =  143 bits (361), Expect(2) = 8e-77
 Identities = 67/100 (67%), Positives = 82/100 (82%)
 Frame = +3

Query: 603 SRAWTSPMGVAMIPFADFLNHDGISEADVFCNEAKQLSEVIADRDYAPGDQVLIRYGKFS 782
           SRAW S  G+++IPFADFLNHDGISEA V  ++  + SEV +DRDY PG+QVLIRYGKFS
Sbjct: 202 SRAWGSTKGLSLIPFADFLNHDGISEAIVMSDDDNKCSEVFSDRDYVPGEQVLIRYGKFS 261

Query: 783 NRTLLLDFGFTLPTNLYDEVQIELDIPHDDPLRSMKMDLL 902
           N TL+LDFGFT+P N+YD+VQI+ DIP  DPLR  K++LL
Sbjct: 262 NATLMLDFGFTIPYNIYDQVQIQYDIPKYDPLRHTKLELL 301


>ref|XP_002878015.1| SET domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323853|gb|EFH54274.1| SET domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 473

 Score =  163 bits (413), Expect(2) = 9e-75
 Identities = 73/147 (49%), Positives = 113/147 (76%)
 Frame = +1

Query: 172 RDFLPWLRQKSGAQISSSLSIGRSTYGRCLFASKCIYAGDVILEVPYTVQLSPNTLLPHI 351
           +DF+PWL + +GA+I+++LSIG+STYGR LFASK I+AGD +L+VP+ VQ++P+ L P I
Sbjct: 44  KDFIPWLERIAGAKITNTLSIGKSTYGRSLFASKVIHAGDCMLKVPFNVQITPDELSPDI 103

Query: 352 KSLLENEVGDIAKLATVILVEQKLGQDSKWAPYVSRLPRLGDMNSTVFWSKDDLQLIEKS 531
           +  L +EVG+I KLA V++ E+K GQ S+W PY+SRLP+  +M+ST+FW +D+  +I  S
Sbjct: 104 RVSLTDEVGNIGKLAAVLIREKKKGQKSRWVPYISRLPQPAEMHSTIFWGEDEFSMIRCS 163

Query: 532 SLYHETIKQRTQIEEDFLAIKPFLLEH 612
           +++ ET+KQ+ QIE++F  +     +H
Sbjct: 164 AVHKETVKQKAQIEKEFSFVAQAFKQH 190



 Score =  144 bits (362), Expect(2) = 9e-75
 Identities = 63/100 (63%), Positives = 85/100 (85%)
 Frame = +3

Query: 603 SRAWTSPMGVAMIPFADFLNHDGISEADVFCNEAKQLSEVIADRDYAPGDQVLIRYGKFS 782
           SRAW +  G+++IPFADF+NHDG+S + V  +E  QLSEV ADR+Y+PGD+V I+YG+FS
Sbjct: 212 SRAWETSKGISLIPFADFMNHDGLSASIVLSDEDNQLSEVTADRNYSPGDEVFIKYGEFS 271

Query: 783 NRTLLLDFGFTLPTNLYDEVQIELDIPHDDPLRSMKMDLL 902
           N TL+LDFGFT+P N++DEVQI++D+P+DDPLR MK+ LL
Sbjct: 272 NATLMLDFGFTVPYNIHDEVQIQMDVPNDDPLRDMKLGLL 311


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