BLASTX nr result

ID: Bupleurum21_contig00001024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001024
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234365.1| DELLA protein GAI [Solanum lycopersicum] gi|...   110   7e-37
ref|XP_002266267.1| PREDICTED: DELLA protein GAI1-like isoform 1...   110   2e-36
emb|CBI33485.3| unnamed protein product [Vitis vinifera]              110   2e-36
emb|CAN59753.1| hypothetical protein VITISV_036639 [Vitis vinifera]   109   4e-36
ref|XP_002302975.1| DELLA domain GRAS family transcription facto...   107   1e-35

>ref|NP_001234365.1| DELLA protein GAI [Solanum lycopersicum]
           gi|75146039|sp|Q7Y1B6.1|GAI_SOLLC RecName: Full=DELLA
           protein GAI; AltName: Full=Gibberellic acid-insensitive
           mutant protein gi|31322802|gb|AAP22369.1| GAI-like
           protein [Solanum lycopersicum]
          Length = 588

 Score =  110 bits (274), Expect(2) = 7e-37
 Identities = 50/57 (87%), Positives = 53/57 (92%)
 Frame = +2

Query: 215 QAILEAFVGANRVHIIDFSLKQGMQWPALFQALALRPGGPPAIRLTGIGPPQPDDTD 385
           QAILEAF G N+VH+IDFSLKQGMQWPAL QALALRPGGPPA RLTGIGPPQPD+TD
Sbjct: 288 QAILEAFTGCNKVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTD 344



 Score = 68.9 bits (167), Expect(2) = 7e-37
 Identities = 32/47 (68%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
 Frame = +3

Query: 3   ADYFALALEKKIYKIFPHEEA-SSYLDMHQMHFYESCPYLKFAHFTA 140
           A YFA AL ++IYKI+P +   SSY D+ QMHFYE+CPYLKFAHFTA
Sbjct: 240 ATYFAEALARRIYKIYPQDSMESSYTDVLQMHFYETCPYLKFAHFTA 286


>ref|XP_002266267.1| PREDICTED: DELLA protein GAI1-like isoform 1 [Vitis vinifera]
          Length = 613

 Score =  110 bits (274), Expect(2) = 2e-36
 Identities = 50/57 (87%), Positives = 53/57 (92%)
 Frame = +2

Query: 215 QAILEAFVGANRVHIIDFSLKQGMQWPALFQALALRPGGPPAIRLTGIGPPQPDDTD 385
           QAILEAF GANRVH+IDF LKQGMQWPAL QALALRPGGPP+ RLTGIGPPQPD+TD
Sbjct: 320 QAILEAFAGANRVHVIDFGLKQGMQWPALMQALALRPGGPPSFRLTGIGPPQPDNTD 376



 Score = 67.4 bits (163), Expect(2) = 2e-36
 Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
 Frame = +3

Query: 3   ADYFALALEKKIYKIFPHEEA-SSYLDMHQMHFYESCPYLKFAHFTA 140
           A YFA AL ++IY+I+P +   SSY D+ QMHFYE+CPYLKFAHFTA
Sbjct: 272 ATYFAEALARRIYRIYPQDSLESSYSDILQMHFYEACPYLKFAHFTA 318


>emb|CBI33485.3| unnamed protein product [Vitis vinifera]
          Length = 263

 Score =  110 bits (274), Expect(2) = 2e-36
 Identities = 50/57 (87%), Positives = 53/57 (92%)
 Frame = +2

Query: 215 QAILEAFVGANRVHIIDFSLKQGMQWPALFQALALRPGGPPAIRLTGIGPPQPDDTD 385
           QAILEAF GANRVH+IDF LKQGMQWPAL QALALRPGGPP+ RLTGIGPPQPD+TD
Sbjct: 186 QAILEAFAGANRVHVIDFGLKQGMQWPALMQALALRPGGPPSFRLTGIGPPQPDNTD 242



 Score = 67.4 bits (163), Expect(2) = 2e-36
 Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
 Frame = +3

Query: 3   ADYFALALEKKIYKIFPHEEA-SSYLDMHQMHFYESCPYLKFAHFTA 140
           A YFA AL ++IY+I+P +   SSY D+ QMHFYE+CPYLKFAHFTA
Sbjct: 138 ATYFAEALARRIYRIYPQDSLESSYSDILQMHFYEACPYLKFAHFTA 184


>emb|CAN59753.1| hypothetical protein VITISV_036639 [Vitis vinifera]
          Length = 580

 Score =  109 bits (272), Expect(2) = 4e-36
 Identities = 50/57 (87%), Positives = 52/57 (91%)
 Frame = +2

Query: 215 QAILEAFVGANRVHIIDFSLKQGMQWPALFQALALRPGGPPAIRLTGIGPPQPDDTD 385
           QAILEAF GANRVH+IDF LKQGMQWPAL QALALRPGGPP  RLTGIGPPQPD+TD
Sbjct: 287 QAILEAFAGANRVHVIDFGLKQGMQWPALMQALALRPGGPPXFRLTGIGPPQPDNTD 343



 Score = 67.4 bits (163), Expect(2) = 4e-36
 Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
 Frame = +3

Query: 3   ADYFALALEKKIYKIFPHEEA-SSYLDMHQMHFYESCPYLKFAHFTA 140
           A YFA AL ++IY+I+P +   SSY D+ QMHFYE+CPYLKFAHFTA
Sbjct: 239 ATYFAEALARRIYRIYPQDSLESSYSDILQMHFYEACPYLKFAHFTA 285


>ref|XP_002302975.1| DELLA domain GRAS family transcription factor rga-like protein
           [Populus trichocarpa] gi|222844701|gb|EEE82248.1| DELLA
           domain GRAS family transcription factor rga-like protein
           [Populus trichocarpa]
          Length = 620

 Score =  107 bits (266), Expect(2) = 1e-35
 Identities = 49/57 (85%), Positives = 52/57 (91%)
 Frame = +2

Query: 215 QAILEAFVGANRVHIIDFSLKQGMQWPALFQALALRPGGPPAIRLTGIGPPQPDDTD 385
           QAILEAF  A+RVH+IDF LKQGMQWPAL QALALRPGGPPA RLTGIGPPQPD+TD
Sbjct: 327 QAILEAFANASRVHVIDFGLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTD 383



 Score = 67.8 bits (164), Expect(2) = 1e-35
 Identities = 32/48 (66%), Positives = 37/48 (77%), Gaps = 2/48 (4%)
 Frame = +3

Query: 3   ADYFALALEKKIYKIFPHEEA--SSYLDMHQMHFYESCPYLKFAHFTA 140
           A YFA AL ++IYKIFP +    SSY D  +MHFYE+CPYLKFAHFTA
Sbjct: 278 ATYFAEALARRIYKIFPQDHCLDSSYSDTLEMHFYETCPYLKFAHFTA 325


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