BLASTX nr result

ID: Bupleurum21_contig00001003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001003
         (1145 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67649.1| hypothetical protein VITISV_005080 [Vitis vinifera]   404   e-172
ref|XP_002277120.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   404   e-172
emb|CBI40505.3| unnamed protein product [Vitis vinifera]              404   e-172
ref|XP_003548422.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   397   e-169
ref|XP_003529893.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   395   e-169

>emb|CAN67649.1| hypothetical protein VITISV_005080 [Vitis vinifera]
          Length = 863

 Score =  404 bits (1037), Expect(2) = e-172
 Identities = 198/233 (84%), Positives = 217/233 (93%)
 Frame = +2

Query: 446  VRQICHIALKRDHEYINTVEEGSEETHAKVRQTHLVAPLEKHFPLLYALLKEHIADDPDY 625
            VRQICHIALKRDHE+INTV+EGSEETH++VRQTH++APL+KHF LLYALLK+HIADD DY
Sbjct: 595  VRQICHIALKRDHEFINTVQEGSEETHSQVRQTHIIAPLDKHFLLLYALLKDHIADDVDY 654

Query: 626  KVLVFCTTAMVTRLVADLLGVLNLNVREIHSRKQQSYRTRVSDEFRRSKGLILVTSDVSA 805
            KVLVFCTTAMVTRLVADLLG LNLNVREIHSRK Q YRTRVSDEFR+SKGLILVTSDVSA
Sbjct: 655  KVLVFCTTAMVTRLVADLLGELNLNVREIHSRKPQGYRTRVSDEFRKSKGLILVTSDVSA 714

Query: 806  RGVDYPDVTLVIQVGLPSDKEQYIHRLGRTGRKGKEGQGILLLAPWEKFFLSNLNDLPLS 985
            RGVDYPDVTLVIQVGLPSDKEQYIHRLGRTGRKGKEGQGILLLAPWE+FFLS   DLP++
Sbjct: 715  RGVDYPDVTLVIQVGLPSDKEQYIHRLGRTGRKGKEGQGILLLAPWEEFFLSTAKDLPIT 774

Query: 986  EASSPSIDSDTIKKVEKALSNVDMKNKAAAYQAWLGYYNSNKTVGKDKQRLVE 1144
            +A +P +D DT KKVE+ALS V+MK+K AAYQAWLGYYNSNK VG+DK RLVE
Sbjct: 775  KAEAPLVDPDTRKKVERALSQVEMKSKEAAYQAWLGYYNSNKKVGRDKVRLVE 827



 Score =  229 bits (583), Expect(2) = e-172
 Identities = 115/126 (91%), Positives = 121/126 (96%)
 Frame = +1

Query: 4   PPILVLVICPTRELASQAAAEAKKLIKYHTFIGVQVVIGGTRLALEQKRMQANPCQILVA 183
           PPI+VLVICPTRELASQAAAEA  L+KYH  +GVQVVIGGTRLALEQKRMQANPCQILVA
Sbjct: 470 PPIVVLVICPTRELASQAAAEANTLLKYHPSLGVQVVIGGTRLALEQKRMQANPCQILVA 529

Query: 184 TPGRLKDHIENTTGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTLLFSA 363
           TPGRLKDHIENT GFATRLMGVKVLVLDEADHLLDMGFR+DIE+IIAAVPKQRQTLLFSA
Sbjct: 530 TPGRLKDHIENTAGFATRLMGVKVLVLDEADHLLDMGFRKDIEKIIAAVPKQRQTLLFSA 589

Query: 364 TVPQEV 381
           TVP+EV
Sbjct: 590 TVPEEV 595


>ref|XP_002277120.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Vitis
            vinifera]
          Length = 751

 Score =  404 bits (1037), Expect(2) = e-172
 Identities = 198/233 (84%), Positives = 217/233 (93%)
 Frame = +2

Query: 446  VRQICHIALKRDHEYINTVEEGSEETHAKVRQTHLVAPLEKHFPLLYALLKEHIADDPDY 625
            VRQICHIALKRDHE+INTV+EGSEETH++VRQTH++APL+KHF LLYALLK+HIADD DY
Sbjct: 483  VRQICHIALKRDHEFINTVQEGSEETHSQVRQTHIIAPLDKHFLLLYALLKDHIADDVDY 542

Query: 626  KVLVFCTTAMVTRLVADLLGVLNLNVREIHSRKQQSYRTRVSDEFRRSKGLILVTSDVSA 805
            KVLVFCTTAMVTRLVADLLG LNLNVREIHSRK Q YRTRVSDEFR+SKGLILVTSDVSA
Sbjct: 543  KVLVFCTTAMVTRLVADLLGELNLNVREIHSRKPQGYRTRVSDEFRKSKGLILVTSDVSA 602

Query: 806  RGVDYPDVTLVIQVGLPSDKEQYIHRLGRTGRKGKEGQGILLLAPWEKFFLSNLNDLPLS 985
            RGVDYPDVTLVIQVGLPSDKEQYIHRLGRTGRKGKEGQGILLLAPWE+FFLS   DLP++
Sbjct: 603  RGVDYPDVTLVIQVGLPSDKEQYIHRLGRTGRKGKEGQGILLLAPWEEFFLSTAKDLPIT 662

Query: 986  EASSPSIDSDTIKKVEKALSNVDMKNKAAAYQAWLGYYNSNKTVGKDKQRLVE 1144
            +A +P +D DT KKVE+ALS V+MK+K AAYQAWLGYYNSNK VG+DK RLVE
Sbjct: 663  KAEAPLVDPDTRKKVERALSQVEMKSKEAAYQAWLGYYNSNKKVGRDKVRLVE 715



 Score =  229 bits (583), Expect(2) = e-172
 Identities = 115/126 (91%), Positives = 121/126 (96%)
 Frame = +1

Query: 4   PPILVLVICPTRELASQAAAEAKKLIKYHTFIGVQVVIGGTRLALEQKRMQANPCQILVA 183
           PPI+VLVICPTRELASQAAAEA  L+KYH  +GVQVVIGGTRLALEQKRMQANPCQILVA
Sbjct: 358 PPIVVLVICPTRELASQAAAEANTLLKYHPSLGVQVVIGGTRLALEQKRMQANPCQILVA 417

Query: 184 TPGRLKDHIENTTGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTLLFSA 363
           TPGRLKDHIENT GFATRLMGVKVLVLDEADHLLDMGFR+DIE+IIAAVPKQRQTLLFSA
Sbjct: 418 TPGRLKDHIENTAGFATRLMGVKVLVLDEADHLLDMGFRKDIEKIIAAVPKQRQTLLFSA 477

Query: 364 TVPQEV 381
           TVP+EV
Sbjct: 478 TVPEEV 483


>emb|CBI40505.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score =  404 bits (1037), Expect(2) = e-172
 Identities = 198/233 (84%), Positives = 217/233 (93%)
 Frame = +2

Query: 446  VRQICHIALKRDHEYINTVEEGSEETHAKVRQTHLVAPLEKHFPLLYALLKEHIADDPDY 625
            VRQICHIALKRDHE+INTV+EGSEETH++VRQTH++APL+KHF LLYALLK+HIADD DY
Sbjct: 464  VRQICHIALKRDHEFINTVQEGSEETHSQVRQTHIIAPLDKHFLLLYALLKDHIADDVDY 523

Query: 626  KVLVFCTTAMVTRLVADLLGVLNLNVREIHSRKQQSYRTRVSDEFRRSKGLILVTSDVSA 805
            KVLVFCTTAMVTRLVADLLG LNLNVREIHSRK Q YRTRVSDEFR+SKGLILVTSDVSA
Sbjct: 524  KVLVFCTTAMVTRLVADLLGELNLNVREIHSRKPQGYRTRVSDEFRKSKGLILVTSDVSA 583

Query: 806  RGVDYPDVTLVIQVGLPSDKEQYIHRLGRTGRKGKEGQGILLLAPWEKFFLSNLNDLPLS 985
            RGVDYPDVTLVIQVGLPSDKEQYIHRLGRTGRKGKEGQGILLLAPWE+FFLS   DLP++
Sbjct: 584  RGVDYPDVTLVIQVGLPSDKEQYIHRLGRTGRKGKEGQGILLLAPWEEFFLSTAKDLPIT 643

Query: 986  EASSPSIDSDTIKKVEKALSNVDMKNKAAAYQAWLGYYNSNKTVGKDKQRLVE 1144
            +A +P +D DT KKVE+ALS V+MK+K AAYQAWLGYYNSNK VG+DK RLVE
Sbjct: 644  KAEAPLVDPDTRKKVERALSQVEMKSKEAAYQAWLGYYNSNKKVGRDKVRLVE 696



 Score =  229 bits (583), Expect(2) = e-172
 Identities = 115/126 (91%), Positives = 121/126 (96%)
 Frame = +1

Query: 4   PPILVLVICPTRELASQAAAEAKKLIKYHTFIGVQVVIGGTRLALEQKRMQANPCQILVA 183
           PPI+VLVICPTRELASQAAAEA  L+KYH  +GVQVVIGGTRLALEQKRMQANPCQILVA
Sbjct: 339 PPIVVLVICPTRELASQAAAEANTLLKYHPSLGVQVVIGGTRLALEQKRMQANPCQILVA 398

Query: 184 TPGRLKDHIENTTGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTLLFSA 363
           TPGRLKDHIENT GFATRLMGVKVLVLDEADHLLDMGFR+DIE+IIAAVPKQRQTLLFSA
Sbjct: 399 TPGRLKDHIENTAGFATRLMGVKVLVLDEADHLLDMGFRKDIEKIIAAVPKQRQTLLFSA 458

Query: 364 TVPQEV 381
           TVP+EV
Sbjct: 459 TVPEEV 464


>ref|XP_003548422.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Glycine max]
          Length = 806

 Score =  397 bits (1020), Expect(2) = e-169
 Identities = 196/234 (83%), Positives = 217/234 (92%), Gaps = 1/234 (0%)
 Frame = +2

Query: 446  VRQICHIALKRDHEYINTVEEGSEETHAKVRQTHLVAPLEKHFPLLYALLKEHIADDPDY 625
            VRQ+CHIAL+RDHE+INTV+EG+EETH++VRQTHLVAPL+KHF LLY LLK+HIADD DY
Sbjct: 537  VRQVCHIALRRDHEFINTVQEGTEETHSQVRQTHLVAPLDKHFSLLYVLLKDHIADDVDY 596

Query: 626  KVLVFCTTAMVTRLVADLLGVLNLNVREIHSRKQQSYRTRVSDEFRRSKGLILVTSDVSA 805
            KVLVFCTTAMVTRLVA+LLG LNLNVREIHSRK QSYRTRVS+EFRRSKGLILVTSDVSA
Sbjct: 597  KVLVFCTTAMVTRLVAELLGELNLNVREIHSRKPQSYRTRVSEEFRRSKGLILVTSDVSA 656

Query: 806  RGVDYPDVTLVIQVGLPSDKEQYIHRLGRTGRKGKEGQGILLLAPWEKFFLSNLNDLPLS 985
            RGVDYPDVTLVIQVGLP+D+EQYIHRLGRTGR+GKEGQGILLLAPWE FFLS + DLP+ 
Sbjct: 657  RGVDYPDVTLVIQVGLPADREQYIHRLGRTGRRGKEGQGILLLAPWEDFFLSTVKDLPIE 716

Query: 986  EAS-SPSIDSDTIKKVEKALSNVDMKNKAAAYQAWLGYYNSNKTVGKDKQRLVE 1144
            +A   PS+D DT KKVEKALS+V+MKNK AAYQAWLGYYNSNK VG+DK RLVE
Sbjct: 717  KAPVLPSVDPDTKKKVEKALSHVEMKNKEAAYQAWLGYYNSNKKVGRDKYRLVE 770



 Score =  226 bits (577), Expect(2) = e-169
 Identities = 114/126 (90%), Positives = 120/126 (95%)
 Frame = +1

Query: 4   PPILVLVICPTRELASQAAAEAKKLIKYHTFIGVQVVIGGTRLALEQKRMQANPCQILVA 183
           PPI VLVICPTRELASQAAAEA KL+KYH  IGVQVVIGGTRLALEQKRMQANPCQILVA
Sbjct: 412 PPISVLVICPTRELASQAAAEATKLLKYHPTIGVQVVIGGTRLALEQKRMQANPCQILVA 471

Query: 184 TPGRLKDHIENTTGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTLLFSA 363
           TPGRL+DH ENT GFATRLMGVKVLVLDEADHLLDMGFR+DIE+IIAAVPKQRQTL+FSA
Sbjct: 472 TPGRLRDHTENTAGFATRLMGVKVLVLDEADHLLDMGFRKDIEKIIAAVPKQRQTLMFSA 531

Query: 364 TVPQEV 381
           TVP+EV
Sbjct: 532 TVPEEV 537


>ref|XP_003529893.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Glycine max]
          Length = 703

 Score =  395 bits (1014), Expect(2) = e-169
 Identities = 195/234 (83%), Positives = 216/234 (92%), Gaps = 1/234 (0%)
 Frame = +2

Query: 446  VRQICHIALKRDHEYINTVEEGSEETHAKVRQTHLVAPLEKHFPLLYALLKEHIADDPDY 625
            VRQ+CHIAL+RDHE+INTV+EG+EETH++V QTHLVAPL+KHF LLY LLK+HIADD DY
Sbjct: 434  VRQVCHIALRRDHEFINTVQEGTEETHSQVCQTHLVAPLDKHFSLLYVLLKDHIADDVDY 493

Query: 626  KVLVFCTTAMVTRLVADLLGVLNLNVREIHSRKQQSYRTRVSDEFRRSKGLILVTSDVSA 805
            KVLVFCTTAMVTRLVA+LLG LNLNVREIHSRK QSYRTRVS+EFR+SKGLILVTSDVSA
Sbjct: 494  KVLVFCTTAMVTRLVAELLGELNLNVREIHSRKPQSYRTRVSEEFRKSKGLILVTSDVSA 553

Query: 806  RGVDYPDVTLVIQVGLPSDKEQYIHRLGRTGRKGKEGQGILLLAPWEKFFLSNLNDLPLS 985
            RGVDYPDVTLVIQVGLP+D+EQYIHRLGRTGR+GKEGQGILLLAPWE FFLS + DLP+ 
Sbjct: 554  RGVDYPDVTLVIQVGLPADREQYIHRLGRTGRRGKEGQGILLLAPWEDFFLSTVKDLPIE 613

Query: 986  EAS-SPSIDSDTIKKVEKALSNVDMKNKAAAYQAWLGYYNSNKTVGKDKQRLVE 1144
            +A   PS+D DT KKVEKALSNV+MKNK AAYQAWLGYYNSNK VG+DK RLVE
Sbjct: 614  KAPVVPSVDPDTKKKVEKALSNVEMKNKEAAYQAWLGYYNSNKKVGRDKYRLVE 667



 Score =  227 bits (578), Expect(2) = e-169
 Identities = 114/126 (90%), Positives = 120/126 (95%)
 Frame = +1

Query: 4   PPILVLVICPTRELASQAAAEAKKLIKYHTFIGVQVVIGGTRLALEQKRMQANPCQILVA 183
           PPI VLVICPTRELASQAAAEA KL+KYH  IGVQVVIGGTRLALEQKRMQANPCQILVA
Sbjct: 309 PPIAVLVICPTRELASQAAAEATKLLKYHPTIGVQVVIGGTRLALEQKRMQANPCQILVA 368

Query: 184 TPGRLKDHIENTTGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTLLFSA 363
           TPGRL+DH ENT GFATRLMGVKVLVLDEADHLLDMGFR+DIE+IIAAVPKQRQTL+FSA
Sbjct: 369 TPGRLRDHTENTAGFATRLMGVKVLVLDEADHLLDMGFRKDIEKIIAAVPKQRQTLMFSA 428

Query: 364 TVPQEV 381
           TVP+EV
Sbjct: 429 TVPEEV 434


Top