BLASTX nr result
ID: Bupleurum21_contig00000495
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00000495
(2767 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2... 625 e-176
ref|XP_002324218.1| predicted protein [Populus trichocarpa] gi|2... 619 e-174
ref|XP_004148391.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 618 e-174
ref|XP_004162977.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 614 e-173
ref|XP_002516507.1| Protein pim1, putative [Ricinus communis] gi... 598 e-168
>ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
Length = 564
Score = 625 bits (1613), Expect = e-176
Identities = 323/537 (60%), Positives = 375/537 (69%), Gaps = 1/537 (0%)
Frame = -3
Query: 1685 TGDGSVYSWGRGMFGRLGNGTEADVLTPSLVNFELAQNGEEISKVKIVGIAAGSYHSLAL 1506
TGDG VYSWGRG FGRLG G+EAD L P + F+ A+ + VK VGIAAG+YHS+AL
Sbjct: 31 TGDGRVYSWGRGTFGRLGTGSEADELFPVPIKFDSAEKSDS-KGVKFVGIAAGAYHSVAL 89
Query: 1505 ADDGSVWSWGYNCYGQLGFEGDNCLVPHLLENFHEFESADSITDGSRAKTKPSLKXXXXX 1326
ADDG+VW WGYN DNCLVPHLLE F S S+TD S K K LK
Sbjct: 90 ADDGTVWCWGYN---SCILSDDNCLVPHLLELFLGLGSLGSLTDESDTKNKTPLKVNAV- 145
Query: 1325 XXXXXXXXXXXXXXXXXXXKAGGMMSLAIDDRGTLWIWGNHPQYILGNEAEVSHGNSSTP 1146
KAGGMMSLAID+ G LW+WGN P+ ++ E S +S TP
Sbjct: 146 -------------------KAGGMMSLAIDNLGGLWMWGNVPESS-PDKGEFSLVSSFTP 185
Query: 1145 IPLRDFHGHTVVKVACGNEHVVALVSARETSNGDDLICYSWGINRHGQLGLGDKESRLSP 966
IP+ DFHGHTVVKVACGNEHVVALVS ET G DLICYSWG N HGQLGLGD E+RL P
Sbjct: 186 IPVWDFHGHTVVKVACGNEHVVALVSHGETYKGGDLICYSWGNNGHGQLGLGDTENRLRP 245
Query: 965 QVVETFNTESPWAVYDIACGGAHTAVLAYKKSSSDKSESVCWTFGLGDNGQLGQGTTQTA 786
+VV+TFN ES W VY++ACG HTA+L +KK SD ES+CWTFGLGDNGQLG GTT+
Sbjct: 246 EVVKTFNLESLWEVYEVACGAFHTALLTHKKRPSDTLESMCWTFGLGDNGQLGHGTTKGI 305
Query: 785 LFPKPVKDLPPNAFLISVDCGLFHTXXXXXXXXXXXXGMEKGLGLCPEVCFSSTDAGDAL 606
P+PVKDLP + FL+SVDCGLFHT GMEKGLGLCP+ F+ TD GDA
Sbjct: 306 SLPEPVKDLPEHRFLVSVDCGLFHTSVVSSAGEVWSWGMEKGLGLCPDASFTGTDPGDAP 365
Query: 605 SPRLISCSELYGPRFLEPVQIVCGAAHTILAAAGGYKLWSWGRGQSGLLGNGKTTDCIDP 426
SP LYG +F +PVQ+ CGAAHT+L A GYKLWSWGRG+SG+LGNGKT DC P
Sbjct: 366 SPL------LYGSKFRDPVQVACGAAHTVLVADDGYKLWSWGRGRSGVLGNGKTVDCFAP 419
Query: 425 STVLWPPLASNDKEVIPDNVNGDNQSVQTDQED-TEDKRKLSAALEEMKLLQTKLSTMER 249
STVLWPPL + KE+ +G+ + D E+ TE +++LS A EEMKLL +KLSTMER
Sbjct: 420 STVLWPPLTEDFKELESGTTSGEKKIENKDPEEVTEMEKRLSLATEEMKLLHSKLSTMER 479
Query: 248 YTSILHGSVFGKPFREQDIPITLQNSGSFDIAREWENMLESSDHAKLARLEMFYQSM 78
Y SILHGS+FGKPF EQDIPI+LQNSG FDIA+EWENMLES+D KL LE FY++M
Sbjct: 480 YASILHGSIFGKPFEEQDIPISLQNSGFFDIAKEWENMLESADRGKLVMLEKFYRNM 536
>ref|XP_002324218.1| predicted protein [Populus trichocarpa] gi|222865652|gb|EEF02783.1|
predicted protein [Populus trichocarpa]
Length = 561
Score = 619 bits (1597), Expect = e-174
Identities = 311/540 (57%), Positives = 375/540 (69%), Gaps = 4/540 (0%)
Frame = -3
Query: 1685 TGDGSVYSWGRGMFGRLGNGTEADVLTPSLVNFELAQNGEEISKVKIVGIAAGSYHSLAL 1506
TGDG VYSWG+GMFGRLG G+E D L P V FE ++ VG+AAG+YHSLAL
Sbjct: 25 TGDGRVYSWGKGMFGRLGTGSEVDELFPVQVKFETCVE----KRLNFVGVAAGAYHSLAL 80
Query: 1505 ADDGSVWSWGYNCYGQLGFEGDNCLVPHLLENFHEFESADSITDGSRAKTKPSLKXXXXX 1326
ADDGSVW WGYN YGQLG G+N +PHL++ F E S S+ D S K++ LK
Sbjct: 81 ADDGSVWCWGYNIYGQLGVSGENYSMPHLMDQFLELGSLGSLIDHSETKSEGPLKICSI- 139
Query: 1325 XXXXXXXXXXXXXXXXXXXKAGGMMSLAIDDRGTLWIWGNHPQYILGNEAEVSHGNSSTP 1146
KAGGMMSLAIDD G LW+WGN PQ + +S +S P
Sbjct: 140 -------------------KAGGMMSLAIDDHGALWMWGNCPQQRNKTGSSISFESSFIP 180
Query: 1145 IPLRDFHGHTVVKVACGNEHVVALVSARETSNGDDLICYSWGINRHGQLGLGDKESRLSP 966
IP+RDFHGH+VVKVACG+EHVVALVSA ET +DL+CYSWG N HGQLGLGD+ESR+ P
Sbjct: 181 IPVRDFHGHSVVKVACGSEHVVALVSAGETYKVEDLVCYSWGNNNHGQLGLGDRESRVHP 240
Query: 965 QVVETFNTESPWAVYDIACGGAHTAVLAYKKSSSDKSESVCWTFGLGDNGQLGQGTTQTA 786
++VE FN +S W VY++ACG HTA+L K+ + D ESVCWTFGLGDNGQLG GTTQ+
Sbjct: 241 EIVEMFNKDSSWDVYEVACGAYHTALLTRKRRTVDPLESVCWTFGLGDNGQLGHGTTQSV 300
Query: 785 LFPKPVKDLPPNAFLISVDCGLFHTXXXXXXXXXXXXGMEKGLGLCPEVCFSSTDAGDAL 606
L P+PVK+LP A LISVDCGLFHT GMEKGLGLCP+ F+ TDAGDA
Sbjct: 301 LKPEPVKELPGQAHLISVDCGLFHTSVVSSVGDVWSWGMEKGLGLCPDASFTGTDAGDAA 360
Query: 605 SPRLISCSELYGPRFLEPVQIVCGAAHTILAAAGGYKLWSWGRGQSGLLGNGKTTDCIDP 426
SP L+S + GP F P+Q+ CGAAHT+L A GYKLWSWGRG SG+LGNGKT +C P
Sbjct: 361 SPLLMSGYGVDGPIFHNPIQVACGAAHTVLVANDGYKLWSWGRGTSGVLGNGKTINCFAP 420
Query: 425 STVLWPPLASNDKEVIPDNV----NGDNQSVQTDQEDTEDKRKLSAALEEMKLLQTKLST 258
S VLWPPL + K+ P V NG +TD ++LS A+EE++LLQ+KLS
Sbjct: 421 SFVLWPPLTEDFKQPEPKTVGEESNGSKAVAETD-------KRLSLAMEEIELLQSKLSI 473
Query: 257 MERYTSILHGSVFGKPFREQDIPITLQNSGSFDIAREWENMLESSDHAKLARLEMFYQSM 78
ME+Y +LHG VFG+PF QDIPI+LQNSG+FDIA+EWE+MLES+DH+KL RLE+FY+ M
Sbjct: 474 MEQYGGMLHGLVFGRPFTYQDIPISLQNSGNFDIAKEWESMLESADHSKLRRLELFYRDM 533
>ref|XP_004148391.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
Length = 571
Score = 618 bits (1593), Expect = e-174
Identities = 310/538 (57%), Positives = 373/538 (69%), Gaps = 2/538 (0%)
Frame = -3
Query: 1685 TGDGSVYSWGRGMFGRLGNGTEADVLTPSLVNFELAQNGEEISKVKIVGIAAGSYHSLAL 1506
TGDG VYSWGRGMFGRLG G E+D L P V +GEE +K+V IAAGSYHSLAL
Sbjct: 31 TGDGRVYSWGRGMFGRLGTGAESDELFPVRVKLG---SGEE--NLKVVAIAAGSYHSLAL 85
Query: 1505 ADDGSVWSWGYNCYGQLGFEGDNCLVPHLLENFHEFESADSITDGSRAKTKPSLKXXXXX 1326
DDGSVW WGYN YGQLGF+G N P LL+ F E E +S+T+ S +K+K SLK
Sbjct: 86 TDDGSVWCWGYNIYGQLGFDGGNSATPCLLKQFLELEPPESLTEESGSKSKGSLKICDI- 144
Query: 1325 XXXXXXXXXXXXXXXXXXXKAGGMMSLAIDDRGTLWIWGNHPQYILGNEAEVSHGNSSTP 1146
KAGG +S AIDD G LW+WGN P+ NE +S+ +S TP
Sbjct: 145 -------------------KAGGQISFAIDDLGALWMWGNCPKPSGENEVGLSYVSSFTP 185
Query: 1145 IPLRDFHGHTVVKVACGNEHVVALVSARETSN-GDDLICYSWGINRHGQLGLGDKESRLS 969
P+ +FHGHTVVKVACGNEH+VALVS ET N +DL+CYSWG N HGQLGLGDK+SR
Sbjct: 186 SPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDSRAC 245
Query: 968 PQVVETFNTESPWAVYDIACGGAHTAVLAYKKSSSDKSESVCWTFGLGDNGQLGQGTTQT 789
PQ++ETFN SPWAVY++ACG HTA+L++ K D ESVCWTFGLG+NGQLG GTTQ
Sbjct: 246 PQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHGTTQN 305
Query: 788 ALFPKPVKDLPPNAFLISVDCGLFHTXXXXXXXXXXXXGMEKGLGLCPEVCFSSTDAGDA 609
P+PVK+LP + LISV CGLFHT GME+GLGLCP+ F+ T+ GDA
Sbjct: 306 EFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLWSWGMERGLGLCPDASFTGTNTGDA 365
Query: 608 LSPRLISCSELYGPRFLEPVQIVCGAAHTILAAAGGYKLWSWGRGQSGLLGNGKTTDCID 429
+SP I CS P+FL+PVQ+ CGAAHT++ A GYKLWSWGRG+SG+LGNGK DC
Sbjct: 366 ISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGNGKAVDCFT 425
Query: 428 PSTVLWPPLASN-DKEVIPDNVNGDNQSVQTDQEDTEDKRKLSAALEEMKLLQTKLSTME 252
P+ VLWPPL + D+E D +E TE+ +KL A+EE+KLL KLS ME
Sbjct: 426 PTVVLWPPLNEDFDQEETETKCEEDKVEENKIEEVTEENKKLLMAMEEIKLLLDKLSIME 485
Query: 251 RYTSILHGSVFGKPFREQDIPITLQNSGSFDIAREWENMLESSDHAKLARLEMFYQSM 78
RY S LHGS+FGKPF+E DIP++L+NSGSFDIA+EWE+MLESSD + L RLE YQ+M
Sbjct: 486 RYASFLHGSIFGKPFQEGDIPLSLRNSGSFDIAKEWESMLESSDRSNLLRLETVYQNM 543
>ref|XP_004162977.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
Length = 581
Score = 614 bits (1583), Expect = e-173
Identities = 311/548 (56%), Positives = 374/548 (68%), Gaps = 12/548 (2%)
Frame = -3
Query: 1685 TGDGSVYSWGRGMFGRLGNGTEADVLTPSLVNFELAQNGEEISKVKIVGIAAGSYHSLAL 1506
TGDG VYSWGRGMFGRLG G E+D L P V +GEE +K+V IAAGSYHSLAL
Sbjct: 31 TGDGRVYSWGRGMFGRLGTGAESDELFPVRVKLG---SGEE--NLKVVAIAAGSYHSLAL 85
Query: 1505 ADDGSVWSWGYNCYGQLGFEGDNCLVPHLLENFHEFESADSITDGSRAKTKPSLKXXXXX 1326
DDGSVW WGYN YGQLGF+G N P LL+ F E E +S+T+ S +K+K SLK
Sbjct: 86 TDDGSVWCWGYNIYGQLGFDGGNSATPCLLKQFLELEPPESLTEESGSKSKGSLKICDI- 144
Query: 1325 XXXXXXXXXXXXXXXXXXXKAGGMMSLAIDDRGTLWIWGNHPQYILGNEAEVSHGNSSTP 1146
KAGG +S AIDD G LW+WGN P+ NE +S+ +S TP
Sbjct: 145 -------------------KAGGQISFAIDDLGALWMWGNCPKPSGENEVGLSYVSSFTP 185
Query: 1145 IPLRDFHGHTVVKVACGNEHVVALVSARETSN-GDDLICYSWGINRHGQLGLGDKESRLS 969
P+ +FHGHTVVKVACGNEH+VALVS ET N +DL+CYSWG N HGQLGLGDK+SR
Sbjct: 186 SPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDSRAC 245
Query: 968 PQVVETFNTESPWAVYDIACGGAHTAVLAYKKSSSDKSESVCWTFGLGDNGQLGQGTTQT 789
PQ++ETFN SPWAVY++ACG HTA+L++ K D ESVCWTFGLG+NGQLG GTTQ
Sbjct: 246 PQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHGTTQN 305
Query: 788 ALFPKPVKDLPPNAFLISVDCGLFHTXXXXXXXXXXXXGMEKGLGLCPEVCFSSTDAGDA 609
P+PVK+LP + LISV CGLFHT GME+GLGLCP+ F+ T+ GDA
Sbjct: 306 EFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLWSWGMERGLGLCPDASFTGTNTGDA 365
Query: 608 LSPRLISCSELYGPRFLEPVQIVCGAAHTILAAAGGYKLWSWGRGQSGLLGNGKTTDCID 429
+SP I CS P+FL+PVQ+ CGAAHT++ A GYKLWSWGRG+SG+LGNGK DC
Sbjct: 366 ISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGNGKAVDCFT 425
Query: 428 PSTVLWPPLASN-DKEVIPDNVNGDNQSVQTDQED----------TEDKRKLSAALEEMK 282
P+ VLWPPL + D+E D +ED TE+ +KL A+EE+K
Sbjct: 426 PTVVLWPPLNEDFDQEETETKCEEDKVEENKTEEDKVEENKIEEVTEENKKLLMAMEEIK 485
Query: 281 LLQTKLSTMERYTSILHGSVFGKPFREQDIPITLQNSGSFDIAREWENMLESSDHAKLAR 102
LL KLS MERY S LHGS+FGKPF+E DIP++L+NSGSFDIA+EWE+MLESSD + L R
Sbjct: 486 LLLDKLSIMERYASFLHGSIFGKPFQEGDIPLSLRNSGSFDIAKEWESMLESSDRSNLLR 545
Query: 101 LEMFYQSM 78
LE YQ+M
Sbjct: 546 LETVYQNM 553
>ref|XP_002516507.1| Protein pim1, putative [Ricinus communis] gi|223544327|gb|EEF45848.1|
Protein pim1, putative [Ricinus communis]
Length = 565
Score = 598 bits (1541), Expect = e-168
Identities = 309/538 (57%), Positives = 371/538 (68%), Gaps = 2/538 (0%)
Frame = -3
Query: 1685 TGDGSVYSWGRGMFGRLGNGTEADVLTPSLVNFELAQNGEEISKVKIVGIAAGSYHSLAL 1506
TGDG VYSWGRG FGRLG G E D L P V F++ + EE K+K VGIAAG+YHS+AL
Sbjct: 32 TGDGCVYSWGRGTFGRLGTGLEKDELYPVKVKFDMCEEFEE-RKLKFVGIAAGAYHSVAL 90
Query: 1505 ADDGSVWSWGYN-CYGQLGFEGDNCLVPHLLENFHEFESADSITDGSRAKTKPSLKXXXX 1329
ADDGSVW WGYN C + +N VP ++E FHE S T+ S + LK
Sbjct: 91 ADDGSVWCWGYNICI----LDPENAAVPRMMEQFHELIYPGSATNESETNREVPLKVCSV 146
Query: 1328 XXXXXXXXXXXXXXXXXXXXKAGGMMSLAIDDRGTLWIWGNHPQYILGNEAEVSHGNSST 1149
KAGGMMSLAID+ G LW+WGN PQ +E+ S +S T
Sbjct: 147 --------------------KAGGMMSLAIDNLGALWMWGNCPQQ--NSESGFSLVSSFT 184
Query: 1148 PIPLRDFHGHTVVKVACGNEHVVALVSARETSNGDDLICYSWGINRHGQLGLGDKESRLS 969
PIP+ DF+GHTVVKVACGNEHVVALVS ET G+DL+CYSWG N HGQLGLGD ESR+
Sbjct: 185 PIPVWDFYGHTVVKVACGNEHVVALVSEGETYKGEDLLCYSWGNNNHGQLGLGDTESRVC 244
Query: 968 PQVVETFNTESPWAVYDIACGGAHTAVLAYKKSSSDKSESVCWTFGLGDNGQLGQGTTQT 789
P++VETFN +SPWAVY+++CG HTA+L KK +DK +S CWTFGLG+NGQLG GTTQ
Sbjct: 245 PEIVETFNQDSPWAVYEVSCGAFHTALLTCKKRPNDKLQSTCWTFGLGENGQLGLGTTQN 304
Query: 788 ALFPKPVKDLPPNAFLISVDCGLFHTXXXXXXXXXXXXGMEKGLGLCPEVCFSSTDAGDA 609
AL P+PVK+LP A+LISVDCGLFHT GM GLGLCP+ F+ TDAGDA
Sbjct: 305 ALKPEPVKELPEYAYLISVDCGLFHTSVVSSAGDVWSWGMMNGLGLCPDARFTGTDAGDA 364
Query: 608 LSPRLISCSELYGPRFLEPVQIVCGAAHTILAAAGGYKLWSWGRGQSGLLGNGKTTDCID 429
+SP LI+ G +F +PVQI CGAAHT+L GGYKLWSWGRG+SG LGNGK D +
Sbjct: 365 ISPLLIT-----GTKFNDPVQITCGAAHTVLVTNGGYKLWSWGRGRSGALGNGKEIDVLV 419
Query: 428 PSTVLWPPLASNDKEVIPDN-VNGDNQSVQTDQEDTEDKRKLSAALEEMKLLQTKLSTME 252
P +LWPPL K +N V DN + +E TE + KLS A+EEMKLLQ+KL+ ME
Sbjct: 420 PGVMLWPPLTEVVKNQESNNSVEEDNLVKKGSEEVTEMENKLSLAMEEMKLLQSKLTIME 479
Query: 251 RYTSILHGSVFGKPFREQDIPITLQNSGSFDIAREWENMLESSDHAKLARLEMFYQSM 78
RY ILHGS+FGKPF E D+PI+LQNS +FDIA+ WE MLES+D +KL RLE+FY++M
Sbjct: 480 RYAGILHGSIFGKPFAEDDLPISLQNSDTFDIAKAWEEMLESADRSKLIRLEIFYRNM 537