BLASTX nr result

ID: Bupleurum21_contig00000491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000491
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB59355.1| peroxisome biogenesis factor 13 [Nicotiana tabacum]    155   6e-36
ref|XP_002524578.1| nucleic acid binding protein, putative [Rici...   155   1e-35
ref|XP_002320551.1| predicted protein [Populus trichocarpa] gi|2...   153   4e-35
ref|XP_004152142.1| PREDICTED: uncharacterized protein LOC101221...   148   1e-33
ref|XP_003537925.1| PREDICTED: uncharacterized protein LOC100820...   144   2e-32

>gb|ACB59355.1| peroxisome biogenesis factor 13 [Nicotiana tabacum]
          Length = 299

 Score =  155 bits (393), Expect = 6e-36
 Identities = 80/121 (66%), Positives = 86/121 (71%)
 Frame = -2

Query: 597 DQDXXXXXXXXXXXPGFWVSFMRVMQGVVTFFGRVAMLIDQNTQAFHMFMSALLQLFDRS 418
           DQD           PGFWVSFM VMQGVVTFFGRVAMLIDQNTQAFHM MSA+LQLFDRS
Sbjct: 175 DQDPNNPFGAPSSPPGFWVSFMHVMQGVVTFFGRVAMLIDQNTQAFHMSMSAMLQLFDRS 234

Query: 417 GMLYGELARFVFRILGIKTKPQRMQXXXXXXXXXXXXXXGIQNQMEGPKAAPSGAWDGVW 238
           GMLYGELARFV R+LG+KTKP ++               G QN +EGPKAAPS  WD VW
Sbjct: 235 GMLYGELARFVLRLLGVKTKPNKVHPPGPGALPGPHHPHGNQNFIEGPKAAPSAGWDNVW 294

Query: 237 G 235
           G
Sbjct: 295 G 295


>ref|XP_002524578.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223536131|gb|EEF37786.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 313

 Score =  155 bits (391), Expect = 1e-35
 Identities = 75/121 (61%), Positives = 89/121 (73%)
 Frame = -2

Query: 597 DQDXXXXXXXXXXXPGFWVSFMRVMQGVVTFFGRVAMLIDQNTQAFHMFMSALLQLFDRS 418
           DQD           PGFW+SF+RVMQGVV FFGR+++LIDQNTQAFHMFM+A+LQLFDR+
Sbjct: 188 DQDPNNPYGAPSSPPGFWISFLRVMQGVVNFFGRISILIDQNTQAFHMFMTAMLQLFDRT 247

Query: 417 GMLYGELARFVFRILGIKTKPQRMQXXXXXXXXXXXXXXGIQNQMEGPKAAPSGAWDGVW 238
           G+LYGELARFV R+LGIKTKP+++Q              G QN +EGPK APSG WD VW
Sbjct: 248 GLLYGELARFVLRLLGIKTKPRKVQGPGPDGLPAPHNPHGNQNYIEGPKGAPSGGWDNVW 307

Query: 237 G 235
           G
Sbjct: 308 G 308


>ref|XP_002320551.1| predicted protein [Populus trichocarpa] gi|222861324|gb|EEE98866.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  153 bits (386), Expect = 4e-35
 Identities = 77/126 (61%), Positives = 89/126 (70%)
 Frame = -2

Query: 597 DQDXXXXXXXXXXXPGFWVSFMRVMQGVVTFFGRVAMLIDQNTQAFHMFMSALLQLFDRS 418
           DQD           P FWVSF++VMQGVV  FGR++ LIDQNTQAFHMFMSALLQLFDRS
Sbjct: 13  DQDPNNPFGAPPSPPSFWVSFLQVMQGVVNVFGRISFLIDQNTQAFHMFMSALLQLFDRS 72

Query: 417 GMLYGELARFVFRILGIKTKPQRMQXXXXXXXXXXXXXXGIQNQMEGPKAAPSGAWDGVW 238
           G+LYGELARF  R+LGIK+KP+++Q              G QN +EGPKAAPSGAWD VW
Sbjct: 73  GLLYGELARFALRLLGIKSKPRKVQGPGPDGFPVPHNPRGNQNYIEGPKAAPSGAWDNVW 132

Query: 237 GSEPNN 220
           G   +N
Sbjct: 133 GDGTSN 138


>ref|XP_004152142.1| PREDICTED: uncharacterized protein LOC101221260 [Cucumis sativus]
           gi|449515057|ref|XP_004164566.1| PREDICTED:
           uncharacterized LOC101221260 [Cucumis sativus]
          Length = 298

 Score =  148 bits (373), Expect = 1e-33
 Identities = 70/105 (66%), Positives = 81/105 (77%)
 Frame = -2

Query: 552 GFWVSFMRVMQGVVTFFGRVAMLIDQNTQAFHMFMSALLQLFDRSGMLYGELARFVFRIL 373
           GFW+SF+RVM GVV FFGR+++LIDQNTQAFHMFM+ALLQLFDRSGMLYGELARFV R+L
Sbjct: 189 GFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLL 248

Query: 372 GIKTKPQRMQXXXXXXXXXXXXXXGIQNQMEGPKAAPSGAWDGVW 238
           GIKTKP+++                 QN +EGPK AP GAWD VW
Sbjct: 249 GIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVW 293


>ref|XP_003537925.1| PREDICTED: uncharacterized protein LOC100820349 [Glycine max]
          Length = 280

 Score =  144 bits (363), Expect = 2e-32
 Identities = 70/110 (63%), Positives = 84/110 (76%), Gaps = 2/110 (1%)
 Frame = -2

Query: 552 GFWVSFMRVMQGVVTFFGRVAMLIDQNTQAFHMFMSALLQLFDRSGMLYGELARFVFRIL 373
           GFW+SFMRVMQGVV FFGR++MLIDQNTQAFHMFM+ALLQLFDRSG+LYGELARFV R+L
Sbjct: 168 GFWISFMRVMQGVVNFFGRISMLIDQNTQAFHMFMTALLQLFDRSGVLYGELARFVLRLL 227

Query: 372 GIKTKPQRMQXXXXXXXXXXXXXXGIQNQ--MEGPKAAPSGAWDGVWGSE 229
           GI+TKP+++                  NQ  +EG K APSG+WD VW ++
Sbjct: 228 GIRTKPKKINPPGPDGLPLPGQHNSSVNQNFIEGTKPAPSGSWDNVWEND 277