BLASTX nr result

ID: Bupleurum21_contig00000482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000482
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266937.1| PREDICTED: fasciclin-like arabinogalactan pr...   189   4e-46
ref|XP_002301590.1| fasciclin-like arabinogalactan protein 12.2 ...   180   2e-43
ref|XP_004144534.1| PREDICTED: fasciclin-like arabinogalactan pr...   179   3e-43
ref|XP_002532284.1| conserved hypothetical protein [Ricinus comm...   179   3e-43
gb|ABD93499.2| cell adhesion protein [Solanum melongena]              178   6e-43

>ref|XP_002266937.1| PREDICTED: fasciclin-like arabinogalactan protein 7 isoform 2
           [Vitis vinifera] gi|225446997|ref|XP_002266986.1|
           PREDICTED: fasciclin-like arabinogalactan protein 7
           isoform 3 [Vitis vinifera]
           gi|225446999|ref|XP_002266893.1| PREDICTED:
           fasciclin-like arabinogalactan protein 7 isoform 1
           [Vitis vinifera] gi|147823112|emb|CAN73020.1|
           hypothetical protein VITISV_004046 [Vitis vinifera]
          Length = 254

 Score =  189 bits (479), Expect = 4e-46
 Identities = 100/148 (67%), Positives = 110/148 (74%)
 Frame = -3

Query: 446 IFAVCSTLVLLCCTSSYAQKAKXXXXXXXXXXXXXXXXXXPEHVNLTELLSVAGPFHTFL 267
           IF V   LVL C +S+YAQ                     P +VNLT+LLSVAGPFHTFL
Sbjct: 4   IFMVICALVLFCSSSAYAQMV-----GSPSLSPSPAPAPAPPYVNLTDLLSVAGPFHTFL 58

Query: 266 DYLVSTKVIETLQNQANDTEEGLTLFVPKDKAFSSLKNPSISNLTADQLKSLCLFHALPH 87
           +YLVSTKVIET Q+QANDTEEG+T+FVPKD AF SLK PS+SNLT DQLKSL LFHAL H
Sbjct: 59  NYLVSTKVIETFQHQANDTEEGITIFVPKDDAFKSLKKPSLSNLTEDQLKSLLLFHALAH 118

Query: 86  YYSLADFKNLSQASPIMTFAGGAYTLNF 3
           YYSLADFKNLSQ SP+ TFAGG YTLNF
Sbjct: 119 YYSLADFKNLSQLSPVSTFAGGQYTLNF 146


>ref|XP_002301590.1| fasciclin-like arabinogalactan protein 12.2 [Populus trichocarpa]
           gi|222843316|gb|EEE80863.1| fasciclin-like
           arabinogalactan protein 12.2 [Populus trichocarpa]
          Length = 263

 Score =  180 bits (456), Expect = 2e-43
 Identities = 93/154 (60%), Positives = 110/154 (71%), Gaps = 1/154 (0%)
 Frame = -3

Query: 461 MEKTMIFAVCSTLVLLCCTSSYAQKAKXXXXXXXXXXXXXXXXXXPEHVNLTELLSVAGP 282
           ME +MI    STL+ LC   +YAQ A                   P +V+LT+LLSVAGP
Sbjct: 1   MEFSMIIMFSSTLLFLCTPVAYAQTAASPPAPTPTPSSSPAPAPTPPYVSLTDLLSVAGP 60

Query: 281 FHTFLDYLVSTKVIETLQNQANDTEEGLTLFVPKDKAFSSLKNPSISNLTADQLKSLCLF 102
           FHTFL YL STKV++T QNQAN+T+EG+T+FVPKD AF +LK PS+SNLT DQ+K L LF
Sbjct: 61  FHTFLSYLESTKVVDTFQNQANNTDEGITIFVPKDDAFKNLKKPSLSNLTQDQVKQLILF 120

Query: 101 HALPHYYSLADFKNLSQASPIMTFAG-GAYTLNF 3
           HALPHYY+LADFKNLSQ SP+ TFAG G Y LNF
Sbjct: 121 HALPHYYALADFKNLSQVSPVSTFAGAGGYALNF 154


>ref|XP_004144534.1| PREDICTED: fasciclin-like arabinogalactan protein 7-like [Cucumis
           sativus] gi|449515965|ref|XP_004165018.1| PREDICTED:
           fasciclin-like arabinogalactan protein 7-like [Cucumis
           sativus]
          Length = 255

 Score =  179 bits (454), Expect = 3e-43
 Identities = 93/150 (62%), Positives = 110/150 (73%)
 Frame = -3

Query: 452 TMIFAVCSTLVLLCCTSSYAQKAKXXXXXXXXXXXXXXXXXXPEHVNLTELLSVAGPFHT 273
           +MIF VCS L+LL  +S+ AQ A                    + VNLT+LL+VAGPFHT
Sbjct: 4   SMIFTVCSALLLLSSSSANAQTASPPSFSPTPAPAPAP-----DFVNLTDLLTVAGPFHT 58

Query: 272 FLDYLVSTKVIETLQNQANDTEEGLTLFVPKDKAFSSLKNPSISNLTADQLKSLCLFHAL 93
           FL YL STK I+T QNQAN+TEEG+T+FVPKD AFS+ K PS+SNLTADQLKSL LFH L
Sbjct: 59  FLSYLQSTKAIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTADQLKSLILFHGL 118

Query: 92  PHYYSLADFKNLSQASPIMTFAGGAYTLNF 3
           PHYYSLA+F+NLS  +PI TFAGG Y+LNF
Sbjct: 119 PHYYSLAEFRNLSLQNPIPTFAGGQYSLNF 148


>ref|XP_002532284.1| conserved hypothetical protein [Ricinus communis]
           gi|223528018|gb|EEF30099.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 263

 Score =  179 bits (454), Expect = 3e-43
 Identities = 96/154 (62%), Positives = 112/154 (72%), Gaps = 1/154 (0%)
 Frame = -3

Query: 461 MEKTMIFAVCSTLVLLCCTSSYAQKAKXXXXXXXXXXXXXXXXXXPEHVNLTELLSVAGP 282
           ME +MIF   STL+ L  +++Y Q A                   P +VNLT+LLSVAGP
Sbjct: 1   MELSMIFMFSSTLLFLFTSTAYVQAASPPSAILPPTPAPAPAPIPP-YVNLTDLLSVAGP 59

Query: 281 FHTFLDYLVSTKVIETLQNQANDTEEGLTLFVPKDKAFSSLKNPSISNLTADQLKSLCLF 102
           FHTFL YLVSTK I+T QNQAN+T+EG+T+FVPKD AFSSLK PS++NLT DQLK L LF
Sbjct: 60  FHTFLSYLVSTKAIDTFQNQANNTDEGITIFVPKDGAFSSLKKPSLTNLTQDQLKQLVLF 119

Query: 101 HALPHYYSLADFKNLSQASPIMTFAG-GAYTLNF 3
           HALPHYYSLA+FKNLSQ SP+ TFAG G Y LNF
Sbjct: 120 HALPHYYSLAEFKNLSQLSPVSTFAGAGEYALNF 153


>gb|ABD93499.2| cell adhesion protein [Solanum melongena]
          Length = 156

 Score =  178 bits (452), Expect = 6e-43
 Identities = 88/108 (81%), Positives = 98/108 (90%), Gaps = 1/108 (0%)
 Frame = -3

Query: 323 EHVNLTELLSVAGPFHTFLDYLVSTKVIETLQNQANDTEEGLTLFVPKDKAFSSLKNPSI 144
           E+ NLT+LLSVAGPFHTFL+YLVSTKVIET Q QAN+TEEG+TLFVPKD AF+SLK PS+
Sbjct: 17  EYTNLTDLLSVAGPFHTFLNYLVSTKVIETFQAQANNTEEGITLFVPKDSAFTSLKKPSL 76

Query: 143 SNLTADQLKSLCLFHALPHYYSLADFKNLSQASPIMTFAGG-AYTLNF 3
           SNLT++QLKSLCLFHALPHYYSLADFKNLS  SPI TFAGG  Y+LNF
Sbjct: 77  SNLTSEQLKSLCLFHALPHYYSLADFKNLSDVSPINTFAGGNLYSLNF 124


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