BLASTX nr result

ID: Bupleurum21_contig00000475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000475
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFN53670.1| hypothetical protein [Linum usitatissimum]              63   4e-08
emb|CAN79814.1| hypothetical protein VITISV_018620 [Vitis vinifera]    61   2e-07
ref|XP_002279113.2| PREDICTED: uncharacterized protein LOC100248...    60   3e-07
emb|CBI15955.3| unnamed protein product [Vitis vinifera]               60   3e-07
ref|XP_002314102.1| predicted protein [Populus trichocarpa] gi|2...    59   6e-07

>gb|AFN53670.1| hypothetical protein [Linum usitatissimum]
          Length = 297

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 9/78 (11%)
 Frame = +2

Query: 329 MKHGKKKKRSRPSQ---------QVHKIGGNQNDDKTKVLNSLMEAFGSVSIDEAASAYK 481
           MK   K+K+ RPS+         Q       Q +D+ KV+ +LMEAF S+SI++A++AYK
Sbjct: 1   MKAQTKRKKRRPSRAASSTPAKAQPSPPARQQEEDERKVVLALMEAFDSISIEDASAAYK 60

Query: 482 EAKGDPDRAAEILCGLDD 535
           EAKGD D+AA+IL  L +
Sbjct: 61  EAKGDVDKAADILASLTE 78


>emb|CAN79814.1| hypothetical protein VITISV_018620 [Vitis vinifera]
          Length = 896

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 34/61 (55%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
 Frame = +2

Query: 341 KKKKRSRPSQQVHKI-GGNQNDDKTKVLNSLMEAFGSVSIDEAASAYKEAKGDPDRAAEI 517
           +KKK SRP + V K  G  Q D+  +   +LMEAFGSVS+ EAASAY+EA+ D ++AAEI
Sbjct: 394 RKKKGSRPRKPVGKEEGSEQEDENRRDAGALMEAFGSVSVVEAASAYREAEEDLNKAAEI 453

Query: 518 L 520
           L
Sbjct: 454 L 454


>ref|XP_002279113.2| PREDICTED: uncharacterized protein LOC100248399 [Vitis vinifera]
          Length = 450

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 34/61 (55%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
 Frame = +2

Query: 341 KKKKRSRPSQQVHKIGG-NQNDDKTKVLNSLMEAFGSVSIDEAASAYKEAKGDPDRAAEI 517
           +KKK SRP + V K  G  Q D+  +   +LMEAFGSVS+ EAASAY+EA+ D ++AAEI
Sbjct: 7   RKKKGSRPRKPVGKEEGCEQEDENRRDAGALMEAFGSVSVVEAASAYREAEEDLNKAAEI 66

Query: 518 L 520
           L
Sbjct: 67  L 67


>emb|CBI15955.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 34/61 (55%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
 Frame = +2

Query: 341 KKKKRSRPSQQVHKIGG-NQNDDKTKVLNSLMEAFGSVSIDEAASAYKEAKGDPDRAAEI 517
           +KKK SRP + V K  G  Q D+  +   +LMEAFGSVS+ EAASAY+EA+ D ++AAEI
Sbjct: 7   RKKKGSRPRKPVGKEEGCEQEDENRRDAGALMEAFGSVSVVEAASAYREAEEDLNKAAEI 66

Query: 518 L 520
           L
Sbjct: 67  L 67


>ref|XP_002314102.1| predicted protein [Populus trichocarpa] gi|222850510|gb|EEE88057.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 14/77 (18%)
 Frame = +2

Query: 332 KHGKKKKR---SRPSQQVHKIGGN-----------QNDDKTKVLNSLMEAFGSVSIDEAA 469
           +H KKKK+   SR S+ +   GG            Q  + TKV+ +LMEAF S+S++EA 
Sbjct: 4   QHNKKKKKRSASRASKPISLDGGQGQQSQRQQNPEQRQEGTKVVEALMEAFDSISVEEAE 63

Query: 470 SAYKEAKGDPDRAAEIL 520
            AY+EAKGD ++AA+IL
Sbjct: 64  EAYREAKGDINKAAQIL 80


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