BLASTX nr result
ID: Bupleurum21_contig00000470
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00000470 (348 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value pdb|4DNQ|A Chain A, Crystal Structure Of Dad2 S96a Mutant gi|414... 80 2e-13 pdb|4DNP|A Chain A, Crystal Structure Of Dad2 80 2e-13 gb|AFR68698.1| DAD2 [Petunia x hybrida] 80 2e-13 emb|CBI19405.3| unnamed protein product [Vitis vinifera] 78 9e-13 ref|XP_002285308.1| PREDICTED: sigma factor sigB regulation prot... 78 9e-13 >pdb|4DNQ|A Chain A, Crystal Structure Of Dad2 S96a Mutant gi|414145490|pdb|4DNQ|B Chain B, Crystal Structure Of Dad2 S96a Mutant gi|414145491|pdb|4DNQ|C Chain C, Crystal Structure Of Dad2 S96a Mutant gi|414145492|pdb|4DNQ|D Chain D, Crystal Structure Of Dad2 S96a Mutant gi|414145493|pdb|4DNQ|E Chain E, Crystal Structure Of Dad2 S96a Mutant gi|414145494|pdb|4DNQ|F Chain F, Crystal Structure Of Dad2 S96a Mutant gi|414145495|pdb|4DNQ|G Chain G, Crystal Structure Of Dad2 S96a Mutant gi|414145496|pdb|4DNQ|H Chain H, Crystal Structure Of Dad2 S96a Mutant gi|414145497|pdb|4DNQ|I Chain I, Crystal Structure Of Dad2 S96a Mutant gi|414145498|pdb|4DNQ|J Chain J, Crystal Structure Of Dad2 S96a Mutant gi|414145499|pdb|4DNQ|K Chain K, Crystal Structure Of Dad2 S96a Mutant gi|414145500|pdb|4DNQ|L Chain L, Crystal Structure Of Dad2 S96a Mutant Length = 269 Score = 80.1 bits (196), Expect = 2e-13 Identities = 40/46 (86%), Positives = 41/46 (89%) Frame = +3 Query: 3 VPASVATYLKNHLGGRNTVVMLNIEGHLPHLSAPGLLAHELLRALS 140 VPASVATYLKNHLGG+NTV LNIEGHLPHLSAP LLA EL RALS Sbjct: 222 VPASVATYLKNHLGGKNTVHWLNIEGHLPHLSAPTLLAQELRRALS 267 >pdb|4DNP|A Chain A, Crystal Structure Of Dad2 Length = 269 Score = 80.1 bits (196), Expect = 2e-13 Identities = 40/46 (86%), Positives = 41/46 (89%) Frame = +3 Query: 3 VPASVATYLKNHLGGRNTVVMLNIEGHLPHLSAPGLLAHELLRALS 140 VPASVATYLKNHLGG+NTV LNIEGHLPHLSAP LLA EL RALS Sbjct: 222 VPASVATYLKNHLGGKNTVHWLNIEGHLPHLSAPTLLAQELRRALS 267 >gb|AFR68698.1| DAD2 [Petunia x hybrida] Length = 267 Score = 80.1 bits (196), Expect = 2e-13 Identities = 40/46 (86%), Positives = 41/46 (89%) Frame = +3 Query: 3 VPASVATYLKNHLGGRNTVVMLNIEGHLPHLSAPGLLAHELLRALS 140 VPASVATYLKNHLGG+NTV LNIEGHLPHLSAP LLA EL RALS Sbjct: 220 VPASVATYLKNHLGGKNTVHWLNIEGHLPHLSAPTLLAQELRRALS 265 >emb|CBI19405.3| unnamed protein product [Vitis vinifera] Length = 167 Score = 77.8 bits (190), Expect = 9e-13 Identities = 39/47 (82%), Positives = 40/47 (85%) Frame = +3 Query: 3 VPASVATYLKNHLGGRNTVVMLNIEGHLPHLSAPGLLAHELLRALSR 143 VP SVA YLKNHLGGRNTV MLN+EGHLPHLSAP LLA L RALSR Sbjct: 121 VPTSVALYLKNHLGGRNTVEMLNVEGHLPHLSAPMLLAPVLRRALSR 167 >ref|XP_002285308.1| PREDICTED: sigma factor sigB regulation protein rsbQ [Vitis vinifera] Length = 266 Score = 77.8 bits (190), Expect = 9e-13 Identities = 39/47 (82%), Positives = 40/47 (85%) Frame = +3 Query: 3 VPASVATYLKNHLGGRNTVVMLNIEGHLPHLSAPGLLAHELLRALSR 143 VP SVA YLKNHLGGRNTV MLN+EGHLPHLSAP LLA L RALSR Sbjct: 220 VPTSVALYLKNHLGGRNTVEMLNVEGHLPHLSAPMLLAPVLRRALSR 266