BLASTX nr result
ID: Bupleurum21_contig00000468
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00000468
(1919 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280389.1| PREDICTED: SWI/SNF complex subunit SWI3A [Vi... 519 e-145
emb|CAN80839.1| hypothetical protein VITISV_043833 [Vitis vinifera] 517 e-144
ref|XP_003602787.1| SWI/SNF complex subunit SMARCC2 [Medicago tr... 460 e-127
ref|XP_003527961.1| PREDICTED: SWI/SNF complex subunit SWI3A-lik... 455 e-125
ref|XP_003523412.1| PREDICTED: SWI/SNF complex subunit SWI3A-lik... 451 e-124
>ref|XP_002280389.1| PREDICTED: SWI/SNF complex subunit SWI3A [Vitis vinifera]
gi|297734457|emb|CBI15704.3| unnamed protein product
[Vitis vinifera]
Length = 563
Score = 519 bits (1337), Expect = e-145
Identities = 289/574 (50%), Positives = 382/574 (66%), Gaps = 22/574 (3%)
Frame = +3
Query: 69 MENSQDPNFK---------ELYTIPSYSRWFSWDDIHQVERYSLKEFFDASSITRTPKIY 221
ME++ DP+ K +LYTIP +S WFSWD+IH+ E+ SLKEFFD SSI+RTPKIY
Sbjct: 1 MESTPDPSSKLTRHDEPELDLYTIPIHSSWFSWDEIHEKEKISLKEFFDGSSISRTPKIY 60
Query: 222 KEYRDFIISKYREEPSRRLTFSEIRKSLVGDLTLLHKVFLFLESWNLINFNAPKIDNDDY 401
KEYRDFIISKYRE+PSRRLTF+EIRKSLVGD++LLHKVFLFLE W LINF AP ++
Sbjct: 61 KEYRDFIISKYREDPSRRLTFAEIRKSLVGDVSLLHKVFLFLERWGLINFGAPGGEDSAA 120
Query: 402 VGE-EDKWNIRVEEGAPYGVKVVAXXXXXXXXXXXXXXXXXXA--DTGVKLPPLASYKDR 572
V E ++ +R E+GAP G++VVA + G +LPPLASY D
Sbjct: 121 VAEGAERHRVRSEDGAPNGIRVVAMPNSLKPITMPLTLDVNGEVDENGFRLPPLASYSDV 180
Query: 573 YSELLKRKKVGCHNCNESCDLGHYEYIKDRSFVICLKCFKSKNYGENKVVDDFKFNDCSP 752
+S+L K K + C NC ++CD GHY +K S VIC+KCFK+ NYGEN+ VDDFKFNDC+
Sbjct: 181 FSDLTKEKGLVCGNCGDNCDSGHYNCLKG-SPVICVKCFKNGNYGENRSVDDFKFNDCNE 239
Query: 753 RNGNLESAWSEAETLLLLESVLKYGDDWEVVAKHVQTKSKMDCIAKLIELPFGELMFGSA 932
GN + W+EAETLLLLESVLK+GDDWE+V ++VQTK+K+DCI+KLIELPFGELM GS+
Sbjct: 240 NRGNRGAVWTEAETLLLLESVLKHGDDWELVVQNVQTKTKLDCISKLIELPFGELMLGSS 299
Query: 933 HGKHRSWDTNDNRSSTK--QMKLDPSELLKAPVSDASNENNDLTKENDDENVQNGISDDV 1106
GK R+ +NDN SS K Q L+ E +K N E +E+ QNG +++
Sbjct: 300 LGKSRA--SNDNTSSIKPVQTSLESQENIK---------NGGQGDEQINESEQNGDAENQ 348
Query: 1107 TPPQKRLCTMRVSDASSSLMKQVSRLSMIVGPHITSSATEAAVAALCYENLCPREIFE-A 1283
PP KR C +SDA SLM+QV+ +S +VGPHI+++A +AAVAALC EN C ++IF+ A
Sbjct: 349 GPPLKRKCITSLSDAGISLMRQVAVISTMVGPHISAAAADAAVAALCDENPCVKDIFDGA 408
Query: 1284 NDEGSHKLGS--SQNEKQRASLAKDSDMEER-YCSDI----SSKNTIPVALQMRXXXXXX 1442
D + +LGS N+ +R+ + +DS++ ER S+I S KN IP+ LQMR
Sbjct: 409 EDNVTEELGSPIRNNKLERSLMVEDSEINERPILSEIQKTSSEKNAIPLPLQMRAAIATA 468
Query: 1443 XXXXXXXXXXXXDQEGREIDHQVAKLIEMQVKKLQCKMRCIDDLEVIMEKQHAEMXXXXX 1622
DQE REI+H VA +IE Q+KKL CK++ +DLE+IMEK++ +
Sbjct: 469 LGAAAANAKSLADQEHREIEHLVATIIETQMKKLHCKIQHFEDLELIMEKEYTHLKELKE 528
Query: 1623 XXXXXRMNVLKRIFSAGISRLGDHTSTPANVTSV 1724
R+++L+R+F+AGISR D S ++ SV
Sbjct: 529 SIIAERIDILQRVFNAGISRWRDPISVKSHTGSV 562
>emb|CAN80839.1| hypothetical protein VITISV_043833 [Vitis vinifera]
Length = 563
Score = 517 bits (1332), Expect = e-144
Identities = 289/574 (50%), Positives = 380/574 (66%), Gaps = 22/574 (3%)
Frame = +3
Query: 69 MENSQDPNFK---------ELYTIPSYSRWFSWDDIHQVERYSLKEFFDASSITRTPKIY 221
ME++ DP+ K +LYTIP +S WFSWD+IH+ E+ SLKEFFD SSI+RTPKIY
Sbjct: 1 MESTPDPSSKLTRHDEPELDLYTIPIHSSWFSWDEIHEKEKISLKEFFDGSSISRTPKIY 60
Query: 222 KEYRDFIISKYREEPSRRLTFSEIRKSLVGDLTLLHKVFLFLESWNLINFNAPKIDNDDY 401
KEYRDFIISKYRE+PSRRLTF+EIRKSLVGD++LLHKVFLFLE W LINF AP ++
Sbjct: 61 KEYRDFIISKYREDPSRRLTFAEIRKSLVGDVSLLHKVFLFLERWGLINFGAPGGEDSAA 120
Query: 402 VGE-EDKWNIRVEEGAPYGVKVVAXXXXXXXXXXXXXXXXXXA--DTGVKLPPLASYKDR 572
V E ++ +R E+GAP G++VVA + G +LPPLASY D
Sbjct: 121 VAEGAERHRVRSEDGAPNGIRVVAMPNSLKPITMPLTLDVNGEVDENGFRLPPLASYSDV 180
Query: 573 YSELLKRKKVGCHNCNESCDLGHYEYIKDRSFVICLKCFKSKNYGENKVVDDFKFNDCSP 752
+S+L K K + C NC ++CD GHY +K S VIC+KCFK+ NYGEN+ VDDFKFNDC+
Sbjct: 181 FSDLTKEKGLVCGNCGDNCDSGHYNCLKG-SPVICVKCFKNGNYGENRSVDDFKFNDCNE 239
Query: 753 RNGNLESAWSEAETLLLLESVLKYGDDWEVVAKHVQTKSKMDCIAKLIELPFGELMFGSA 932
GN + W+EAETLLLLESVLK+GDDWE+V ++VQTK+K+DCI+KLIELPFGELM GS+
Sbjct: 240 NRGNRGAVWTEAETLLLLESVLKHGDDWELVVQNVQTKTKLDCISKLIELPFGELMLGSS 299
Query: 933 HGKHRSWDTNDNRSSTK--QMKLDPSELLKAPVSDASNENNDLTKENDDENVQNGISDDV 1106
GK R+ +NDN SS K Q L+ E +K N E +E+ QNG +++
Sbjct: 300 LGKSRA--SNDNTSSIKPVQTSLESQENIK---------NGGQGDEQINESEQNGDAENQ 348
Query: 1107 TPPQKRLCTMRVSDASSSLMKQVSRLSMIVGPHITSSATEAAVAALCYENLCPREIFE-A 1283
PP KR C +SDA SLM QV+ +S +VGPHI+++A +AAVAALC EN C ++IF+ A
Sbjct: 349 GPPLKRKCITSLSDAGISLMXQVAVISTMVGPHISAAAADAAVAALCDENPCVKDIFDGA 408
Query: 1284 NDEGSHKLGS--SQNEKQRASLAKDSDMEER-YCSDI----SSKNTIPVALQMRXXXXXX 1442
D + +LGS N +R+ + +DS++ ER S+I S KN IP+ LQMR
Sbjct: 409 EDNVTEELGSPIRNNXLERSLMVEDSEINERPILSEIQKTSSEKNAIPLPLQMRAAIATA 468
Query: 1443 XXXXXXXXXXXXDQEGREIDHQVAKLIEMQVKKLQCKMRCIDDLEVIMEKQHAEMXXXXX 1622
DQE REI+H VA +IE Q+KKL CK++ +DLE+IMEK++ +
Sbjct: 469 LGAAAANAKSLADQEHREIEHLVATIIETQMKKLHCKIQHFEDLELIMEKEYTHLKELKE 528
Query: 1623 XXXXXRMNVLKRIFSAGISRLGDHTSTPANVTSV 1724
R+++L+R+F+AGISR D S ++ SV
Sbjct: 529 SIIAERIDILQRVFNAGISRWRDPISVKSHTGSV 562
>ref|XP_003602787.1| SWI/SNF complex subunit SMARCC2 [Medicago truncatula]
gi|355491835|gb|AES73038.1| SWI/SNF complex subunit
SMARCC2 [Medicago truncatula]
Length = 540
Score = 460 bits (1184), Expect = e-127
Identities = 251/550 (45%), Positives = 348/550 (63%), Gaps = 12/550 (2%)
Frame = +3
Query: 69 MENSQDP---NFKELYTIPSYSRWFSWDDIHQVERYSLKEFFDASSITRTPKIYKEYRDF 239
ME S+DP + ELYTIPS S+WF+WD+IH+ E+ + KE+FD +SITRTPKIYKEYRDF
Sbjct: 1 MEGSKDPISDSELELYTIPSSSKWFAWDEIHETEKTAFKEYFDGTSITRTPKIYKEYRDF 60
Query: 240 IISKYREEPSRRLTFSEIRKSLVGDLTLLHKVFLFLESWNLINFNAPKIDND---DYVGE 410
II+KYREEPSRRLTF+E+RKSLVGD+T L+KVFLFLE W LIN+ AP ND + E
Sbjct: 61 IINKYREEPSRRLTFTEVRKSLVGDVTFLNKVFLFLECWGLINYGAPSAGNDGEAEKEHE 120
Query: 411 EDKWNIRVEEGAPYGVKVVA-----XXXXXXXXXXXXXXXXXXADTGVKLPPLASYKDRY 575
+++ ++VEEGAP G++VVA + GVK+ PLASY D Y
Sbjct: 121 KERCKLKVEEGAPNGIRVVATPNSLKPISLPRDTKIAAGGGDESGAGVKIAPLASYSDVY 180
Query: 576 SELLKRKKVGCHNCNESCDLGHYEYIKDRSFVICLKCFKSKNYGENKVVDDFKFNDCSPR 755
+L++RK+V C NC + C GHY KD +F+IC KCFK+ NYGE + ++DFK N+ S
Sbjct: 181 GDLIRRKEVNCGNCGDKCGSGHYRSTKD-NFIICTKCFKNGNYGEKRSMEDFKLNESSEI 239
Query: 756 NGNLESAWSEAETLLLLESVLKYGDDWEVVAKHVQTKSKMDCIAKLIELPFGELMFGSAH 935
+ N + W+E ETLLLLESVLK+GDDWE+VA+ V+TK+K++CI+KLIELPFGELM S
Sbjct: 240 SANHSAVWTEGETLLLLESVLKHGDDWELVAQSVRTKTKLECISKLIELPFGELMLASVR 299
Query: 936 GKHRSWDTNDNRSSTKQMKLDPSELLKAPVS-DASNENNDLTKENDDENVQNGISDDVTP 1112
S ++ Q+++ S+ + ++ D S+E + ++N D +N
Sbjct: 300 RNDNSNSVTGIVNNRNQVQVSSSDHQETSMTQDQSSEPKNEVEQNGDAVNEN-------- 351
Query: 1113 PQKRLCTMRVSDASSSLMKQVSRLSMIVGPHITSSATEAAVAALCYENLCPREIFEANDE 1292
P KR +SD+SSSLMKQV LS +V PH+T++A AA+ ALC EN PR+IF+ ++
Sbjct: 352 PSKRRRVSTLSDSSSSLMKQVGLLSTVVDPHVTAAAASAAITALCDENSLPRDIFDVEED 411
Query: 1293 GSHKLGSSQNEKQRASLAKDSDMEERYCSDISSKNTIPVALQMRXXXXXXXXXXXXXXXX 1472
N RA A+ +M E + K+ IP+ L++R
Sbjct: 412 ---------NASARALEAEGLEMVEG-STQSEVKDDIPLTLRIRAAIGTALGATAARAKL 461
Query: 1473 XXDQEGREIDHQVAKLIEMQVKKLQCKMRCIDDLEVIMEKQHAEMXXXXXXXXXXRMNVL 1652
DQE REI+H VA +IE QV+KLQ K++ D+LE++MEK+HAEM R++VL
Sbjct: 462 LADQEDREIEHLVATIIEAQVEKLQQKVKHFDELELLMEKEHAEMEELKDSILTERIDVL 521
Query: 1653 KRIFSAGISR 1682
++ F +G++R
Sbjct: 522 RKTFKSGVAR 531
>ref|XP_003527961.1| PREDICTED: SWI/SNF complex subunit SWI3A-like [Glycine max]
Length = 522
Score = 455 bits (1171), Expect = e-125
Identities = 254/551 (46%), Positives = 343/551 (62%), Gaps = 8/551 (1%)
Frame = +3
Query: 69 MENSQDPNFK---ELYTIPSYSRWFSWDDIHQVERYSLKEFFDASSITRTPKIYKEYRDF 239
ME ++DPN ELYTIPS SRWF+W++IH+ ER + KE+FD +SITRTPKIYKEYRDF
Sbjct: 1 MEVTKDPNSDFELELYTIPSSSRWFAWEEIHETERTAFKEYFDGNSITRTPKIYKEYRDF 60
Query: 240 IISKYREEPSRRLTFSEIRKSLVGDLTLLHKVFLFLESWNLINFNA--PKIDNDDYVGEE 413
II+KYREEPSRRLTF+E+RKSLVGD+T LHK FL LE W LIN+ P D EE
Sbjct: 61 IINKYREEPSRRLTFTEVRKSLVGDVTFLHKAFLLLEHWGLINYGTAQPSSGADAAEEEE 120
Query: 414 DKWNIRVEEGAPYGVKVVAXXXXXXXXXXXXXXXXXXADTG--VKLPPLASYKDRYSELL 587
+ +R+EEGAP G++V A +G +KLPPLASY D Y +L+
Sbjct: 121 EHRKVRLEEGAPGGIRVAATPNSLKPMLLPRNGKSGVNASGASLKLPPLASYSDVYGDLI 180
Query: 588 KRKKVGCHNCNESCDLGHYEYIKDRSFVICLKCFKSKNYGENKVVDDFKFNDCSPRNGNL 767
++K+ C C C GHY +D +F+IC+ CFKS NYGE + +DF ++ S +G
Sbjct: 181 RQKEGNCGLCGHKCGSGHYRCTQD-NFIICINCFKSGNYGEKRSTEDFVLSESSENSGKH 239
Query: 768 ESAWSEAETLLLLESVLKYGDDWEVVAKHVQTKSKMDCIAKLIELPFGELMFGSAHGKHR 947
++ W+EAETLLLLESVLK+GDDWE+VA+ VQTK+K+DCI+KLIELPFGELM G AH
Sbjct: 240 DTVWTEAETLLLLESVLKHGDDWELVAQSVQTKTKLDCISKLIELPFGELMLGPAHRNVN 299
Query: 948 SWDTNDNRSSTKQMKLDPSELLKAPVSDASNENNDLTKENDDENVQNGISDDV-TPPQKR 1124
D N ++ KQ++ S+ + ++ D + E +EN QNG D V P KR
Sbjct: 300 INDANGIVNNAKQVQSSSSD------NQEISKTKDQSPEFTNENEQNG--DAVKESPSKR 351
Query: 1125 LCTMRVSDASSSLMKQVSRLSMIVGPHITSSATEAAVAALCYENLCPREIFEANDEGSHK 1304
+SD+SSSLM QV +S +V PHIT++A +AAV+ALC E+LCPREIF+ +
Sbjct: 352 QRVASLSDSSSSLMNQVGLISNVVDPHITAAAADAAVSALCDEDLCPREIFDVD------ 405
Query: 1305 LGSSQNEKQRASLAKDSDMEERYCSDISSKNTIPVALQMRXXXXXXXXXXXXXXXXXXDQ 1484
G E +R+SL++ IP+ L++R DQ
Sbjct: 406 -GEEGLEMERSSLSE-----------------IPLTLRVRAATATALGAAAARAKLLADQ 447
Query: 1485 EGREIDHQVAKLIEMQVKKLQCKMRCIDDLEVIMEKQHAEMXXXXXXXXXXRMNVLKRIF 1664
E REI+H VA +IE Q+ K+ K++ DDLE++MEK+HAEM R++VL+R F
Sbjct: 448 EDREIEHLVATIIEAQIDKMLQKVKHFDDLELLMEKEHAEMENKKDSILTERIDVLRRTF 507
Query: 1665 SAGISRLGDHT 1697
+G++R D++
Sbjct: 508 RSGVTRWKDYS 518
>ref|XP_003523412.1| PREDICTED: SWI/SNF complex subunit SWI3A-like [Glycine max]
Length = 527
Score = 451 bits (1161), Expect = e-124
Identities = 255/553 (46%), Positives = 344/553 (62%), Gaps = 10/553 (1%)
Frame = +3
Query: 69 MENSQDPNFK-------ELYTIPSYSRWFSWDDIHQVERYSLKEFFDASSITRTPKIYKE 227
ME ++DPN + ELYTIPS SRWF+W++IH+ ER + KE+FD SSI+R+PKIYKE
Sbjct: 1 MEVAKDPNSQADSDSELELYTIPSSSRWFAWEEIHETERAAFKEYFDGSSISRSPKIYKE 60
Query: 228 YRDFIISKYREEPSRRLTFSEIRKSLVGDLTLLHKVFLFLESWNLINFNAPKIDNDDYVG 407
YRDFII+KYREEPSRRLTFSE+RKSLVGD+T LHKVFLFLE W LIN+ +D
Sbjct: 61 YRDFIINKYREEPSRRLTFSEVRKSLVGDVTFLHKVFLFLEHWALINYGTA----EDV-- 114
Query: 408 EEDKWNIRVEEGAPYGVKVVAXXXXXXXXXXXXXXXXXXADTG--VKLPPLASYKDRYSE 581
EED +R EEGAP G++V A TG +KLPPLASY D Y +
Sbjct: 115 EEDHCKVRFEEGAPSGIRVAATPNSLKPMLLPRNGKSAANATGASLKLPPLASYSDVYGD 174
Query: 582 LLKRKKVGCHNCNESCDLGHYEYIKDRSFVICLKCFKSKNYGENKVVDDFKFNDCSPRNG 761
L+++K+ C C C GHY +D +F+IC CFKS NYGE + +DF F++ S +
Sbjct: 175 LIRQKEGNCALCAHQCGSGHYRCTQD-NFIICANCFKSGNYGEKRSAEDFVFSESSENSV 233
Query: 762 NLESAWSEAETLLLLESVLKYGDDWEVVAKHVQTKSKMDCIAKLIELPFGELMFGSAHGK 941
++ W+EAETLLLLESVLK+GDDWE+VA+ VQTK+K+DCI+KLIELPFGELM G H
Sbjct: 234 KHDTVWTEAETLLLLESVLKHGDDWELVAQSVQTKTKLDCISKLIELPFGELMLGPTHKN 293
Query: 942 HRSWDTNDNRSSTKQMKLDPSELLKAPVSDASNENNDLTKENDDENVQNGISDDV-TPPQ 1118
N ++ KQ++ S+ + ++ D T E +EN QNG D V P
Sbjct: 294 VNINGANGIMNNAKQVQSSSSD------NQEISKTKDQTPELTNENEQNG--DAVKESPS 345
Query: 1119 KRLCTMRVSDASSSLMKQVSRLSMIVGPHITSSATEAAVAALCYENLCPREIFEANDEGS 1298
KR +SD+SS LM QV +S +V PHIT++A +AAV+ALC E+LCPREIF+ ++ S
Sbjct: 346 KRQRVAALSDSSSLLMNQVGLISNVVDPHITAAAADAAVSALCDEDLCPREIFDVEEDYS 405
Query: 1299 HKLGSSQNEKQRASLAKDSDMEERYCSDISSKNTIPVALQMRXXXXXXXXXXXXXXXXXX 1478
A+ + EE + SS + IP+ L++R
Sbjct: 406 ---------------ARALEGEEGLEMERSSLSEIPLTLRVRAATATALGAAAARAKLLA 450
Query: 1479 DQEGREIDHQVAKLIEMQVKKLQCKMRCIDDLEVIMEKQHAEMXXXXXXXXXXRMNVLKR 1658
DQE REI+H VA +IE Q++K+ K++ D+LE++MEK+HAEM R++VL+R
Sbjct: 451 DQEDREIEHLVATIIEAQIEKMLRKVKHFDNLELLMEKEHAEMENLKDSILTERIDVLRR 510
Query: 1659 IFSAGISRLGDHT 1697
F +G++R D++
Sbjct: 511 TFRSGVTRWKDYS 523