BLASTX nr result

ID: Bupleurum21_contig00000456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000456
         (3104 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35394.3| unnamed protein product [Vitis vinifera]              408   e-111
ref|XP_002273393.2| PREDICTED: riboflavin biosynthesis protein r...   407   e-110
ref|XP_002310055.1| predicted protein [Populus trichocarpa] gi|2...   392   e-106
ref|XP_004147108.1| PREDICTED: uncharacterized protein LOC101215...   386   e-104
ref|XP_003535768.1| PREDICTED: uncharacterized protein LOC100808...   377   e-101

>emb|CBI35394.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score =  408 bits (1048), Expect = e-111
 Identities = 201/292 (68%), Positives = 235/292 (80%)
 Frame = -2

Query: 1552 LSDSLSQQEDDGEPSSERLSAVAGGIVALGKFEALHIGHRELAIQAARVGIPFLLSFVGM 1373
            +S  L  Q    +     ++A  GGIVALGKF+ALHIGHRELAIQA+RVG PFLLSFVGM
Sbjct: 51   VSSGLGLQTKKKKLQCSSMAATVGGIVALGKFDALHIGHRELAIQASRVGAPFLLSFVGM 110

Query: 1372 AEVLGWEPRAPIVAKCDRKRILSSWAPYCGDVTPTEFEVDFSKVRSLTPRQFVEKLSRKL 1193
            AEVLGWEPRAPIVAKCDRKR+LSSWAP CG+VTP EF ++FS VR LTPRQFVEKL ++L
Sbjct: 111  AEVLGWEPRAPIVAKCDRKRVLSSWAPLCGNVTPLEFLIEFSSVRHLTPRQFVEKLYKEL 170

Query: 1192 GVCGVVAGKNYRFGYRAAGDASELVKLCEEYGMDAYIINSVMDKKQDSRVIGLDNPKEQG 1013
            GV GVVAG+NYRFGY+AAGD+SELV+LCEE+GM AYII  VMD  QDSR     N KE+G
Sbjct: 171  GVRGVVAGENYRFGYKAAGDSSELVRLCEEFGMGAYIIKPVMDNNQDSRNTASSNSKERG 230

Query: 1012 QVSSTRVRHALNRGDMRYVSELLGRHHRLMLMWNDGEKFTRENNRISASKSCLLNLPPKE 833
            QVSSTRVRHAL+ GDM+YVSELLGR HRL+L     E FT   +++SA KSCLLNLPPKE
Sbjct: 231  QVSSTRVRHALSIGDMKYVSELLGRQHRLILTAQYQEAFTSSKHKVSAPKSCLLNLPPKE 290

Query: 832  GLYENCSIVVGDESFVACRVTIDTTHIHLELDDIETCIHIVSQGFWFLGIDF 677
            GLYENCS+++ DE+ V+CRV IDTTHIHLE D++    H+ SQG W LG++F
Sbjct: 291  GLYENCSLLIDDENPVSCRVVIDTTHIHLEFDEVGPYKHLTSQGPWQLGVEF 342


>ref|XP_002273393.2| PREDICTED: riboflavin biosynthesis protein ribF-like [Vitis vinifera]
          Length = 276

 Score =  407 bits (1045), Expect = e-110
 Identities = 198/274 (72%), Positives = 230/274 (83%)
 Frame = -2

Query: 1498 LSAVAGGIVALGKFEALHIGHRELAIQAARVGIPFLLSFVGMAEVLGWEPRAPIVAKCDR 1319
            ++A  GGIVALGKF+ALHIGHRELAIQA+RVG PFLLSFVGMAEVLGWEPRAPIVAKCDR
Sbjct: 1    MAATVGGIVALGKFDALHIGHRELAIQASRVGAPFLLSFVGMAEVLGWEPRAPIVAKCDR 60

Query: 1318 KRILSSWAPYCGDVTPTEFEVDFSKVRSLTPRQFVEKLSRKLGVCGVVAGKNYRFGYRAA 1139
            KR+LSSWAP CG+VTP EF ++FS VR LTPRQFVEKL ++LGV GVVAG+NYRFGY+AA
Sbjct: 61   KRVLSSWAPLCGNVTPLEFLIEFSSVRHLTPRQFVEKLYKELGVRGVVAGENYRFGYKAA 120

Query: 1138 GDASELVKLCEEYGMDAYIINSVMDKKQDSRVIGLDNPKEQGQVSSTRVRHALNRGDMRY 959
            GD+SELV+LCEE+GM AYII  VMD  QDSR     N KE+GQVSSTRVRHAL+ GDM+Y
Sbjct: 121  GDSSELVRLCEEFGMGAYIIKPVMDNNQDSRNTASSNSKERGQVSSTRVRHALSIGDMKY 180

Query: 958  VSELLGRHHRLMLMWNDGEKFTRENNRISASKSCLLNLPPKEGLYENCSIVVGDESFVAC 779
            VSELLGR HRL+L     E FT   +++SA KSCLLNLPPKEGLYENCS+++ DE+ V+C
Sbjct: 181  VSELLGRQHRLILTAQYQEAFTSSKHKVSAPKSCLLNLPPKEGLYENCSLLIDDENPVSC 240

Query: 778  RVTIDTTHIHLELDDIETCIHIVSQGFWFLGIDF 677
            RV IDTTHIHLE D++    H+ SQG W LG++F
Sbjct: 241  RVVIDTTHIHLEFDEVGPYKHLTSQGPWQLGVEF 274


>ref|XP_002310055.1| predicted protein [Populus trichocarpa] gi|222852958|gb|EEE90505.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score =  392 bits (1008), Expect = e-106
 Identities = 199/306 (65%), Positives = 246/306 (80%), Gaps = 2/306 (0%)
 Frame = -2

Query: 1588 IQPKSPFTENHTLSDSLSQQEDDGEPSSERLSAVAGGIVALGKFEALHIGHRELAIQAAR 1409
            +Q KS   E   LSD +SQ+++D E  SE L++VAGGIVALGKF+ALHIGHRELAIQA++
Sbjct: 78   LQSKSSSGETPILSDCVSQRDNDCELPSEGLASVAGGIVALGKFDALHIGHRELAIQASK 137

Query: 1408 VGIPFLLSFVGMAEVLGWEPRAPIVAKCDRKRILSSWAPYCGDVTPTEFEVDFSKVRSLT 1229
            VG P LLSFVGMAE+LGWEPRAPIVAKCDR R+LSSWAPYCG++ P E +++FS VR LT
Sbjct: 138  VGAPSLLSFVGMAEILGWEPRAPIVAKCDRSRVLSSWAPYCGNLVPEEVQIEFSCVRHLT 197

Query: 1228 PRQFVEKLSRKLGVCGVVAGKNYRFGYRAAGDASELVKLCEEYGMDAYIINSVMDKKQDS 1049
            PRQFVEKLS++LGV GVVAG+NYRFGY+AAGDASELV+LC+E+GM AYII+SVMD  QD 
Sbjct: 198  PRQFVEKLSKELGVIGVVAGENYRFGYKAAGDASELVRLCKEHGMGAYIISSVMDNNQDY 257

Query: 1048 RVIGLDNPKEQGQVSSTRVRHALNRGDMRYVSELLGRHHRLMLMWNDGEKFTRENN--RI 875
            R +  ++ K++GQVSSTRVR AL  GDM+YVSELLGRHHRL+LM  D E+  + ++  R+
Sbjct: 258  RSMNSNDLKDRGQVSSTRVRQALAVGDMKYVSELLGRHHRLILMLKDQEERAKTSSGWRV 317

Query: 874  SASKSCLLNLPPKEGLYENCSIVVGDESFVACRVTIDTTHIHLELDDIETCIHIVSQGFW 695
            SA KS LLNLPPK+G YENCS++ G+++ V CRV +DTTHIHLE D+ +       Q   
Sbjct: 318  SAPKSYLLNLPPKDGFYENCSLLFGNKNPVTCRVFMDTTHIHLETDEADPFDFETDQEPH 377

Query: 694  FLGIDF 677
             LGI+F
Sbjct: 378  LLGIEF 383


>ref|XP_004147108.1| PREDICTED: uncharacterized protein LOC101215305 [Cucumis sativus]
            gi|449503500|ref|XP_004162033.1| PREDICTED:
            uncharacterized LOC101215305 [Cucumis sativus]
          Length = 363

 Score =  386 bits (991), Expect = e-104
 Identities = 193/293 (65%), Positives = 233/293 (79%)
 Frame = -2

Query: 1588 IQPKSPFTENHTLSDSLSQQEDDGEPSSERLSAVAGGIVALGKFEALHIGHRELAIQAAR 1409
            I P +   E   LSD    +EDD E S      VAGGIVALGKF+ALH+GHRELAIQA+ 
Sbjct: 65   IVPSTSSGEIPVLSDCFGSREDDREVS------VAGGIVALGKFDALHVGHRELAIQASM 118

Query: 1408 VGIPFLLSFVGMAEVLGWEPRAPIVAKCDRKRILSSWAPYCGDVTPTEFEVDFSKVRSLT 1229
            VG PFLLSFVG+AEVLGWEPRAPIVA+CDR+R+LSSWAPYC +  P+E+ + FS VR LT
Sbjct: 119  VGSPFLLSFVGIAEVLGWEPRAPIVAQCDRQRVLSSWAPYCQNSAPSEYRIQFSSVRYLT 178

Query: 1228 PRQFVEKLSRKLGVCGVVAGKNYRFGYRAAGDASELVKLCEEYGMDAYIINSVMDKKQDS 1049
            PR+FVEKLS++L VCGVVAG++YRFGY+AAGDA+ELVKLCEEYG+ AYII SVMD+ Q  
Sbjct: 179  PREFVEKLSKELRVCGVVAGESYRFGYKAAGDAAELVKLCEEYGISAYIIKSVMDRNQ-- 236

Query: 1048 RVIGLDNPKEQGQVSSTRVRHALNRGDMRYVSELLGRHHRLMLMWNDGEKFTRENNRISA 869
            +V+   N KE+GQVSSTRVRHAL++GDM+YVSELLGR HRL+LM    E F+  NNR+SA
Sbjct: 237  KVVNSANSKERGQVSSTRVRHALSKGDMKYVSELLGRRHRLILMAEGLEGFSNSNNRVSA 296

Query: 868  SKSCLLNLPPKEGLYENCSIVVGDESFVACRVTIDTTHIHLELDDIETCIHIV 710
             +SCLLNL PKEGLY NC +   DE+ + CRV ID+TH+H+E+DDI T  H+V
Sbjct: 297  PRSCLLNLAPKEGLYNNCFVCTTDENLIPCRVAIDSTHVHIEMDDIGTS-HLV 348


>ref|XP_003535768.1| PREDICTED: uncharacterized protein LOC100808911 [Glycine max]
          Length = 372

 Score =  377 bits (968), Expect = e-101
 Identities = 203/313 (64%), Positives = 236/313 (75%), Gaps = 1/313 (0%)
 Frame = -2

Query: 1612 FGRPIVGCIQPKSPFTENHTLSDSLSQQEDDGEPSSERLSAVAGGIVALGKFEALHIGHR 1433
            FG P      PKSP  E   L D  SQQE+D E  S+  SAVAGGIVALGKF+ALHIGHR
Sbjct: 62   FGTP------PKSP-GEIPLLFDCFSQQEEDREILSDGTSAVAGGIVALGKFDALHIGHR 114

Query: 1432 ELAIQAARVGIPFLLSFVGMAEVLGWEPRAPIVAKCDRKRILSSWAPYCGDVTPTEFEVD 1253
            ELAIQA+R G PFLLSFVGMA+VLGWEPRAPIVAKCDRKRILSSW PYC ++ P EFEV+
Sbjct: 115  ELAIQASRAGPPFLLSFVGMAKVLGWEPRAPIVAKCDRKRILSSWVPYCCNMVPEEFEVE 174

Query: 1252 FSKVRSLTPRQFVEKLSRKLGVCGVVAGKNYRFGYRAAGDASELVKLCEEYGMDAYIINS 1073
            FS VR L PRQFVEKLS++L V GVVAG+NYRFGY+AAGDA ELVKLCEEYGM+AYII S
Sbjct: 175  FSSVRHLNPRQFVEKLSKELRVRGVVAGENYRFGYKAAGDALELVKLCEEYGMEAYIIKS 234

Query: 1072 VMDKKQDSR-VIGLDNPKEQGQVSSTRVRHALNRGDMRYVSELLGRHHRLMLMWNDGEKF 896
            VMDK + S  +  + N KE+GQVSSTRVR AL  GD++YVSELLGR HRL+LM  D E+F
Sbjct: 235  VMDKNRFSADMNSVTNSKERGQVSSTRVREALAVGDLKYVSELLGRPHRLILMATDQERF 294

Query: 895  TRENNRISASKSCLLNLPPKEGLYENCSIVVGDESFVACRVTIDTTHIHLELDDIETCIH 716
            +    ++SA +SCLLNL PKEGLYE CS+++  E+ V C V ID+  +H+E D       
Sbjct: 295  STGQYKVSAPRSCLLNLAPKEGLYEKCSLLLDQENVVQCSVVIDSKFVHIETDYGGLSDI 354

Query: 715  IVSQGFWFLGIDF 677
              SQ   FL I+F
Sbjct: 355  FCSQNLKFLFIEF 367


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